EnhancerDB
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Enhancers that regulate C19orf52[ENSG00000142444.6]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 10949257 10949551 vista28605 11039409 89858
VISTA
chr19 10955666 10955680 vista28606 11039409 83729
VISTA
chr19 10983266 10983642 vista28607 11039409 55767
VISTA
chr19 10983285 11012541 enh5003 11039409 26868
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr19 10983653 10983862 vista28608 11039409 55547
VISTA
chr19 10987245 10987998 vista28609 11039409 51411
VISTA
chr19 10988040 10988081 vista28610 11039409 51328
VISTA
chr19 10989126 10989500 vista28611 11039409 49909
VISTA
chr19 10992105 10992492 vista28612 11039409 46917
VISTA
chr19 10999263 10999360 vista28613 11039409 40049
VISTA
chr19 11044165 11061272 enh17918 11039409 4756
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr19 11044199 11044446 vista28614 11039409 4790
VISTA
chr19 11061468 11065830 enh17919 11039409 22059
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Esophagus Placenta Colon (HCT116) Lung (PC-9) Epithelial (MCF-7)
chr19 11069405 11074895 enh5004 11039409 29996
Blood (Karpas-422)
chr19 11077205 11090515 enh5005 11039409 37796
Brain (SK-N-SH) Blood (OCI-LY7) Blood (GM12878) Colon (HCT116) Blood (Karpas-422) Thymus Stomach
chr19 11126493 11132054 enh102599 11039409 87084
Bone (Osteoblast)
Transcript facotrs that regulate C19orf52[ENSG00000142444.6]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 11044067 11044357 ZNF143 GTRD no Epithelial (MCF-7) 11039409 4658 21849164
chr19 11044067 11044357 ZNF143 GTRD no Epithelial (MCF-7) 11039409 4658 108384247
chr19 11044208 11044212 NFE TRANSFAC yes 11039409 4799 70803594
chr19 11044208 11044212 NFE TRANSFAC yes 11039409 4799 112445775
chr19 11044208 11044213 GATA1 TRANSFAC yes 11039409 4799 70803595
chr19 11044208 11044213 GATA1 TRANSFAC yes 11039409 4799 112445776
chr19 11044208 11044214 GATA3 JASPAR yes 11039409 4799 70803596
chr19 11044208 11044214 GATA3 JASPAR yes 11039409 4799 112445777
chr19 11044212 11044218 LEF1 TRANSFAC yes 11039409 4803 70803597
chr19 11044212 11044218 SOX10 JASPAR yes 11039409 4803 70803598
chr19 11044212 11044218 LEF1 TRANSFAC yes 11039409 4803 112445778
chr19 11044212 11044218 SOX10 JASPAR yes 11039409 4803 112445779
chr19 11044255 11044265 NFIA JASPAR yes 11039409 4846 70803599
chr19 11044255 11044265 NFIA JASPAR yes 11039409 4846 112445780
chr19 11044257 11044263 NFIC JASPAR yes 11039409 4848 70803600
chr19 11044257 11044263 NFIC JASPAR yes 11039409 4848 112445781
chr19 11044257 11044272 HNF4A JASPAR yes 11039409 4848 70803601
chr19 11044257 11044272 HNF4A JASPAR yes 11039409 4848 112445782
chr19 11044258 11044272 RXRB JASPAR yes 11039409 4849 70803602
chr19 11044258 11044272 RXRG JASPAR yes 11039409 4849 70803603
chr19 11044258 11044272 RXRB JASPAR yes 11039409 4849 112445783
chr19 11044258 11044272 RXRG JASPAR yes 11039409 4849 112445784
chr19 11044258 11044273 HNF4G JASPAR yes 11039409 4849 70803604
chr19 11044258 11044273 HNF4G JASPAR yes 11039409 4849 112445785
chr19 11044261 11044265 YY1 TRANSFAC yes 11039409 4852 70803605
chr19 11044261 11044265 YY1 TRANSFAC yes 11039409 4852 112445786
chr19 11044261 11044274 NR2F1 JASPAR yes 11039409 4852 70803606
chr19 11044261 11044274 NR2F1 JASPAR yes 11039409 4852 112445787
chr19 11044264 11044279 HNF4A JASPAR yes 11039409 4855 70803607
chr19 11044264 11044279 HNF4A JASPAR yes 11039409 4855 112445788
chr19 11044265 11044279 NR2F1 JASPAR yes 11039409 4856 70803608
chr19 11044265 11044279 RXRB JASPAR yes 11039409 4856 70803609
chr19 11044265 11044279 RXRG JASPAR yes 11039409 4856 70803610
chr19 11044265 11044279 NR2F1 JASPAR yes 11039409 4856 112445789
chr19 11044265 11044279 RXRB JASPAR yes 11039409 4856 112445790
chr19 11044265 11044279 RXRG JASPAR yes 11039409 4856 112445791
chr19 11044265 11044280 HNF4G JASPAR yes 11039409 4856 70803611
chr19 11044265 11044280 HNF4G JASPAR yes 11039409 4856 112445792
chr19 11044271 11044287 POU4F2 JASPAR yes 11039409 4862 70803612
chr19 11044271 11044287 POU4F3 JASPAR yes 11039409 4862 70803613
chr19 11044271 11044287 POU4F2 JASPAR yes 11039409 4862 112445793
chr19 11044271 11044287 POU4F3 JASPAR yes 11039409 4862 112445794
chr19 11044290 11044305 SCRT1 JASPAR yes 11039409 4881 70803614
chr19 11044290 11044305 SCRT1 JASPAR yes 11039409 4881 112445795
chr19 11044294 11044303 SNAI2 JASPAR yes 11039409 4885 70803615
chr19 11044294 11044303 SNAI2 JASPAR yes 11039409 4885 112445796
chr19 11044294 11044304 FIGLA JASPAR yes 11039409 4885 70803616
chr19 11044294 11044304 ID4 JASPAR yes 11039409 4885 70803617
chr19 11044294 11044304 MSC JASPAR yes 11039409 4885 70803618
chr19 11044294 11044304 MYF6 JASPAR yes 11039409 4885 70803619
chr19 11044294 11044304 TCF3 JASPAR yes 11039409 4885 70803620
chr19 11044294 11044304 TCF4 JASPAR yes 11039409 4885 70803621
chr19 11044294 11044304 TFAP4 JASPAR yes 11039409 4885 70803622
chr19 11044294 11044304 FIGLA JASPAR yes 11039409 4885 112445797
chr19 11044294 11044304 ID4 JASPAR yes 11039409 4885 112445798
chr19 11044294 11044304 MSC JASPAR yes 11039409 4885 112445799
chr19 11044294 11044304 MYF6 JASPAR yes 11039409 4885 112445800
chr19 11044294 11044304 TCF3 JASPAR yes 11039409 4885 112445801
chr19 11044294 11044304 TCF4 JASPAR yes 11039409 4885 112445802
chr19 11044294 11044304 TFAP4 JASPAR yes 11039409 4885 112445803
chr19 11044294 11044306 TAL1 JASPAR yes 11039409 4885 70803623
chr19 11044294 11044306 TAL1 JASPAR yes 11039409 4885 112445804
chr19 11044306 11044324 MAFF JASPAR yes 11039409 4897 70803624
chr19 11044306 11044324 MAFF JASPAR yes 11039409 4897 112445805
chr19 11044307 11044322 MAFK JASPAR yes 11039409 4898 70803625
chr19 11044307 11044322 MAFK JASPAR yes 11039409 4898 112445806
chr19 11044311 11044322 NRL JASPAR yes 11039409 4902 70803626
chr19 11044311 11044322 NRL JASPAR yes 11039409 4902 112445807
chr19 11044330 11044337 SPIB JASPAR yes 11039409 4921 70803627
chr19 11044330 11044337 SPIB JASPAR yes 11039409 4921 112445808
chr19 11044356 11044366 NFAT4 TRANSFAC yes 11039409 4947 70803628
chr19 11044356 11044366 NFAT4 TRANSFAC yes 11039409 4947 112445809
chr19 11044357 11044361 YY1 TRANSFAC yes 11039409 4948 70803629
chr19 11044357 11044361 YY1 TRANSFAC yes 11039409 4948 112445810
chr19 11044359 11044369 NFATC3 JASPAR yes 11039409 4950 70803630
chr19 11044359 11044369 NFATC3 JASPAR yes 11039409 4950 112445811
chr19 11044360 11044367 NFATC2 JASPAR yes 11039409 4951 70803631
chr19 11044360 11044367 NFATC2 JASPAR yes 11039409 4951 112445812
chr19 11044396 11044399 MYB TRANSFAC yes 11039409 4987 70803632
chr19 11044396 11044399 MYB TRANSFAC yes 11039409 4987 112445813
SNPs associated with C19orf52[ENSG00000142444.6], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr19 10981992 rs117569851 T C 57417 Pancreas 0.00226223 5439512
chr19 10631375 rs7256611 A G 408034 Uterus 0.192606 5437091
chr19 11067295 rs113142792 C T 23084 Thyroid 0.00405755 5440162
Details of C19orf52[ENSG00000142444.6]
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Genomic Location chr19:11039409-11044211[+]
TSS 11039409
Gene Name C19orf52
Ensembl ID ENSG00000142444.6
ENTREZID
Uniprot
Protein Name
Mitochondrial import inner membrane translocase subunit Tim29
Expression levels of C19orf52[ENSG00000142444.6]
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