EnhancerDB
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Enhancers that regulate SYTL1[ENSG00000142765.13]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 27560045 27569615 enh172 27668513 98898
Placenta Blood (Karpas-422)
chr1 27571962 27576186 enh61819 27668513 92327
Esophagus Prostate (RWPE1)
chr1 27576245 27587315 enh173 27668513 81198
Blood (T-cell) Blood (Karpas-422) Blood (GM12878)
chr1 27623165 27627624 enh11664 27668513 40889
Muscle (Myoblast) Placenta Uterus Heart
chr1 27625914 27626081 vista908 27668513 42432
VISTA
chr1 27626897 27627231 vista909 27668513 41282
VISTA
chr1 27645553 27645918 vista910 27668513 22595
VISTA
chr1 27691785 27692261 vista911 27668513 23272
VISTA
chr1 27720012 27730415 enh11665 27668513 51499
Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Heart
chr1 27742945 27784244 enh174 27668513 74432
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 27762936 27763307 vista912 27668513 94423
VISTA
Transcript facotrs that regulate SYTL1[ENSG00000142765.13]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SYTL1[ENSG00000142765.13], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 27965336 rs1292085 C G 284915 Esophagus 0.0647165 187585
chr1 27452052 rs200301293 G GC 216461 Esophagus 0.393833 184315
chr1 27668610 rs41291086 C T 0 Esophagus 5.81819e-16 185294
chr1 28348240 rs4908388 C G 667819 Heart 0.291109 189324
chr1 27647082 rs4970518 T C 21431 Heart 0.060766 185272
chr1 28514782 rs146272127 C T 834361 Breast 0.163746 190788
chr1 28201987 rs61789661 C T 521566 Spleen 0.161912 188810
chr1 27846127 rs141563249 C T 165706 Ovary 0.321752 186552
chr1 28432399 rs536132 T A,C 751978 Uterus 0.479932 189992
chr1 28231237 rs7536686 G A 550816 Adrenal 0.32208 188972
Details of SYTL1[ENSG00000142765.13]
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Genomic Location chr1:27668513-27680421[+]
TSS 27668513
Gene Name SYTL1
Ensembl ID ENSG00000142765.13
ENTREZID 84958
Uniprot
Q8IYJ3
Protein Name
Synaptotagmin-like protein 1
Expression levels of SYTL1[ENSG00000142765.13]
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