EnhancerDB
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Enhancers that regulate EFNA3[ENSG00000143590.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 154940826 154945730 enh102385 155036224 90494
Bone (Osteoblast)
chr1 154957258 154957622 vista3405 155036224 78602
VISTA
chr1 154972605 154982275 enh12281 155036224 53949
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Blood (T-cell) Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Thymus Heart
chr1 154972628 154972915 vista3406 155036224 63309
VISTA
chr1 154973036 154973200 vista3407 155036224 63024
VISTA
chr1 154973335 154973935 vista3408 155036224 62289
VISTA
chr1 154977099 154977253 vista3409 155036224 58971
VISTA
chr1 154978035 154978657 vista3410 155036224 57567
VISTA
chr1 154979104 154979305 vista3411 155036224 56919
VISTA
chr1 154982565 154986715 enh646 155036224 49509
Blood (Karpas-422)
chr1 154986150 154986272 vista3412 155036224 49952
VISTA
chr1 154993365 154997515 enh12282 155036224 38709
Placenta
chr1 154997722 154998120 vista3413 155036224 38104
VISTA
chr1 155042384 155046446 enh115372 155036224 6160
Brain (SK-N-SH)
chr1 155052148 155052357 vista3414 155036224 15924
VISTA
chr1 155052572 155053010 vista3415 155036224 16348
VISTA
chr1 155052803 155057322 enh85976 155036224 16579
Colon (HCT116) Prostate (RWPE1)
chr1 155055153 155055331 vista3416 155036224 18929
VISTA
chr1 155061898 155069199 enh12283 155036224 25674
Brain (SK-N-SH) Prostate (RWPE1) Esophagus Stomach Placenta Uterus Heart
chr1 155064132 155064186 vista3417 155036224 27908
VISTA
chr1 155064813 155064992 vista3418 155036224 28589
VISTA
chr1 155066604 155066635 vista3419 155036224 30380
VISTA
chr1 155072845 155082595 enh12284 155036224 36621
Liver (HepG2) Large Intestine Placenta Spleen Stomach
chr1 155088205 155094915 enh95908 155036224 51981
Stomach Epithelial (MCF-7)
chr1 155097183 155097419 vista3420 155036224 60959
VISTA
chr1 155098409 155098801 vista3421 155036224 62185
VISTA
chr1 155129665 155133815 enh12285 155036224 93441
Placenta
Transcript facotrs that regulate EFNA3[ENSG00000143590.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with EFNA3[ENSG00000143590.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 154699702 rs71628632 C T 336522 Esophagus 0.353375 640067
chr1 154638076 rs35806755 C CA 398148 Heart 0.300795 639787
chr1 154400893 rs73014271 C T 635331 Heart 0.0553522 638691
chr1 155043307 rs397862207 CT C 0 Pancreas 0.229459 642678
chr1 155570670 rs10796948 C T 510656 Breast 0.362997 645200
chr1 154412080 rs59502179 C T 624144 Spleen 0.172728 638821
chr1 154997263 rs11585544 C A 38961 Ovary 0.834711 642517
chr1 155190254 rs2990220 T A 130240 Uterus 0.271522 643575
chr1 155053719 rs1462855 C T 0 Thyroid 0.0667323 642747
chr1 154776886 rs1702177 G A 259338 Lung 0.112034 640768
chr1 155057645 rs199552063 GGGGGTGGGCCCC G 0 Stomach 0.338456 642789
chr1 155043436 rs4845712 G C 0 Adrenal 0.0128577 642684
Details of EFNA3[ENSG00000143590.9]
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Genomic Location chr1:155036224-155060014[+]
TSS 155036224
Gene Name EFNA3
Ensembl ID ENSG00000143590.9
ENTREZID 1944
Uniprot
P52797
Protein Name
Ephrin-A3
Expression levels of EFNA3[ENSG00000143590.9]
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