EnhancerDB
  1. Home
  2. Gene
  3. SEC13[ENSG00000157020.13]
Enhancers that regulate SEC13[ENSG00000157020.13]
Back to top
Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr3 10260321 10267779 enh54007 10362862 95083
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (T-cell) Stomach
chr3 10265421 10265646 vista39921 10362862 97216
VISTA
chr3 10266595 10266861 vista39922 10362862 96001
VISTA
chr3 10268365 10272519 enh48623 10362862 90343
Esophagus Thymus Blood (T-cell)
chr3 10269999 10270176 vista39923 10362862 92686
VISTA
chr3 10270353 10270559 vista39924 10362862 92303
VISTA
chr3 10273840 10274164 vista39925 10362862 88698
VISTA
chr3 10276652 10276834 vista39926 10362862 86028
VISTA
chr3 10303065 10309433 enh35177 10362862 53429
Blood (T-cell) Astrocyte Bone (Osteoblast) Colon (HCT116) Uterus Neural Stem Cells (H9) Thymus
chr3 10390276 10400315 enh35178 10362862 27414
Prostate (PC-3) Brain (SK-N-SH) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (Myoblast) Muscle (Myotube) Heart
chr3 10395342 10395455 vista39927 10362862 32480
VISTA
chr3 10402355 10402452 vista39928 10362862 39493
VISTA
chr3 10404579 10410848 enh20319 10362862 41717
Prostate (PC-3) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myoblast)
chr3 10408339 10408724 vista39929 10362862 45477
VISTA
chr3 10421025 10425175 enh6990 10362862 58163
Blood (Karpas-422)
chr3 10428045 10439995 enh6991 10362862 65183
Thymus Blood (OCI-LY7) Peripheral Blood (MM.1S) Blood (Karpas-422) Blood (T-cell)
Transcript facotrs that regulate SEC13[ENSG00000157020.13]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SEC13[ENSG00000157020.13], confirmed by eQTL
Back to top
Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr3 9937788 rs559555139 G A 397027 Esophagus 0.589418 6541083
chr3 10823089 rs1485140 G A,T 460227 Heart 0.249916 6544715
chr3 10710226 rs147864780 T C 347364 Breast 0.156819 6544286
chr3 10308985 rs17032596 T G 25830 Uterus 0.176344 6542525
chr3 10816922 rs78572811 C CAA 454060 Liver 0.309292 6544618
chr3 10561751 rs114600030 C T 198889 Adrenal 0.123027 6543858
Details of SEC13[ENSG00000157020.13]
Back to top
Genomic Location chr3:10334815-10362862[-]
TSS 10362862
Gene Name SEC13
Ensembl ID ENSG00000157020.13
ENTREZID 6396
Uniprot
A0A0C4DFR6
A8MWR8
P55735
Protein Name
Protein SEC13 homolog
Expression levels of SEC13[ENSG00000157020.13]
Back to top