EnhancerDB
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Enhancers that regulate RGS12[ENSG00000159788.14]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr4 3192025 3208149 enh48796 3294755 86606
Liver (HepG2) Brain (SK-N-SH) Blood (T-cell) Bone (Osteoblast) Muscle (A673) Pancreas Thymus Epithelial (MCF-7)
chr4 3194617 3194824 vista43946 3294755 99931
VISTA
chr4 3203733 3204143 vista43947 3294755 90612
VISTA
chr4 3228357 3228568 vista43948 3294755 66187
VISTA
chr4 3276805 3280955 enh36302 3294755 13800
Astrocyte
chr4 3293872 3294174 vista43949 3294755 581
VISTA
chr4 3299667 3310015 enh45612 3294755 4912
Brain (SK-N-SH) Ovary Blood (T-cell) Bone (Osteoblast) Stomach Adrenal Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Muscle (Myotube) Thymus Heart
chr4 3303883 3304472 vista43950 3294755 9128
VISTA
chr4 3311305 3315839 enh54563 3294755 16550
Esophagus Prostate (PC-3) Large Intestine
chr4 3320141 3327426 enh45613 3294755 25386
Liver (HepG2) Brain (SK-N-SH) Bone (Osteoblast) Stomach Muscle (A673) Muscle (Myotube) Heart
chr4 3323359 3323797 vista43951 3294755 28604
VISTA
chr4 3330556 3350197 enh65807 3294755 35801
Heart Prostate (RWPE1) Bone (Osteoblast) Muscle (A673) Thyroid Uterus Epithelial (MCF-7)
chr4 3354245 3362586 enh86507 3294755 59490
Colon (HCT116) Liver (HepG2) Stomach
chr4 3357519 3357800 vista43952 3294755 62764
VISTA
chr4 3367212 3371574 enh115826 3294755 72457
Brain (SK-N-SH)
chr4 3372879 3372940 vista43953 3294755 78124
VISTA
chr4 3374732 3375130 vista43954 3294755 79977
VISTA
chr4 3385085 3395955 enh21316 3294755 90330
Brain (SK-N-MC) Astrocyte Muscle (A673) Placenta Embryonic Stem Cell Line (H1-hESC) Uterus
chr4 3389642 3390154 vista43955 3294755 94887
VISTA
chr4 3390647 3391111 vista43956 3294755 95892
VISTA
chr4 3391112 3391254 vista43957 3294755 96357
VISTA
Transcript facotrs that regulate RGS12[ENSG00000159788.14]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr4 3293692 3295330 POLR2A UCSC Txn Factor no Conserved 3294755 575 108531890
chr4 3293874 3293895 ZNF263 JASPAR yes 3294755 860 49192061
chr4 3293875 3293896 ZNF263 JASPAR yes 3294755 859 49192062
chr4 3293876 3293881 ETS2 TRANSFAC yes 3294755 874 49192063
chr4 3293878 3293899 ZNF263 JASPAR yes 3294755 856 49192064
chr4 3293879 3293900 ZNF263 JASPAR yes 3294755 855 49192065
chr4 3293882 3293893 FLI1 JASPAR yes 3294755 862 49192066
chr4 3293883 3293891 EHF JASPAR yes 3294755 864 49192067
chr4 3293883 3293904 ZNF263 JASPAR yes 3294755 851 49192068
chr4 3293886 3293897 FLI1 JASPAR yes 3294755 858 49192069
chr4 3293887 3293892 ETS2 TRANSFAC yes 3294755 863 49192070
chr4 3293887 3293895 EHF JASPAR yes 3294755 860 49192071
chr4 3293888 3293908 ESR1 JASPAR yes 3294755 847 49192072
chr4 3293891 3293909 ESR2 JASPAR yes 3294755 846 49192073
chr4 3293892 3293910 ESR1 JASPAR yes 3294755 845 49192074
chr4 3293892 3293910 ESR2 JASPAR yes 3294755 845 49192075
chr4 3293893 3293903 SP1 JASPAR yes 3294755 852 49192076
chr4 3293893 3293908 ESR2 JASPAR yes 3294755 847 49192077
chr4 3293893 3293913 ESR1 JASPAR yes 3294755 842 49192078
chr4 3293894 3293898 LFA1 TRANSFAC yes 3294755 857 49192079
chr4 3293914 3293935 ZNF263 JASPAR yes 3294755 820 49192080
chr4 3293915 3293920 ETS2 TRANSFAC yes 3294755 835 49192081
chr4 3293917 3293938 ZNF263 JASPAR yes 3294755 817 49192082
chr4 3293918 3293923 ETS2 TRANSFAC yes 3294755 832 49192083
chr4 3293938 3293946 EHF JASPAR yes 3294755 809 49192084
chr4 3293942 3293947 ETS2 TRANSFAC yes 3294755 808 49192085
chr4 3293966 3293971 SP1 TRANSFAC yes 3294755 784 49192086
chr4 3293967 3293988 REST JASPAR yes 3294755 767 49192087
chr4 3293976 3293990 TLX1 JASPAR yes 3294755 765 49192088
chr4 3294001 3294006 SP1 TRANSFAC yes 3294755 749 49192089
chr4 3294001 3294008 SP1 TRANSFAC yes 3294755 747 49192090
chr4 3294001 3294010 SP1 TRANSFAC yes 3294755 745 49192091
chr4 3294007 3294011 LFA1 TRANSFAC yes 3294755 744 49192092
chr4 3294041 3294045 H4TF2 TRANSFAC yes 3294755 710 49192093
chr4 3294045 3294050 SP1 TRANSFAC yes 3294755 705 49192094
chr4 3294053 3294074 REST JASPAR yes 3294755 681 49192095
chr4 3294063 3294078 ZIC3 JASPAR yes 3294755 677 49192096
chr4 3294070 3294076 MAZ TRANSFAC yes 3294755 679 49192097
chr4 3294073 3294086 NFKB2 JASPAR yes 3294755 669 49192098
chr4 3294075 3294079 LFA1 TRANSFAC yes 3294755 676 49192099
chr4 3294126 3294131 SP1 TRANSFAC yes 3294755 624 49192100
chr4 3294126 3294140 PLAG1 JASPAR yes 3294755 615 49192101
chr4 3294128 3294140 TFAP2A JASPAR yes 3294755 615 49192102
chr4 3294128 3294143 TFAP2A JASPAR yes 3294755 612 49192103
chr4 3294129 3294138 TFAP2A JASPAR yes 3294755 617 49192104
chr4 3294136 3294154 NR3C1 JASPAR yes 3294755 601 49192105
chr4 3294141 3294151 REL JASPAR yes 3294755 604 49192106
chr4 3294154 3294158 NFE TRANSFAC yes 3294755 597 49192107
chr4 3294172 3294558 PHF8 UCSC Txn Factor no Conserved 3294755 197 108531891
chr4 3299668 3299672 YY1 TRANSFAC yes 3294755 4913 87894492
chr4 3299671 3299685 PAX6 JASPAR yes 3294755 4916 87894493
chr4 3299678 3299688 ALX3 JASPAR yes 3294755 4923 87894494
chr4 3299678 3299688 EN2 JASPAR yes 3294755 4923 87894495
chr4 3299678 3299688 ESX1 JASPAR yes 3294755 4923 87894496
chr4 3299679 3299683 H1TF2 TRANSFAC yes 3294755 4924 87894497
chr4 3299679 3299683 NFE TRANSFAC yes 3294755 4924 87894498
chr4 3299679 3299683 SRF TRANSFAC yes 3294755 4924 87894499
chr4 3299679 3299687 BSX JASPAR yes 3294755 4924 87894500
chr4 3299679 3299687 DLX6 JASPAR yes 3294755 4924 87894501
chr4 3299679 3299687 MSX1 JASPAR yes 3294755 4924 87894502
chr4 3299679 3299687 MSX2 JASPAR yes 3294755 4924 87894503
chr4 3299683 3299697 RXRB JASPAR yes 3294755 4928 87894504
chr4 3299683 3299697 RXRG JASPAR yes 3294755 4928 87894505
chr4 3299683 3299698 LEF1 JASPAR yes 3294755 4928 87894506
chr4 3299684 3299698 TCF7L2 JASPAR yes 3294755 4929 87894507
chr4 3299691 3299694 MYB TRANSFAC yes 3294755 4936 87894508
chr4 3299704 3299708 TEAD2 TRANSFAC yes 3294755 4949 87894509
chr4 3299704 3299709 TBP TRANSFAC yes 3294755 4949 87894510
chr4 3299704 3299710 TFIID TRANSFAC yes 3294755 4949 87894511
chr4 3299744 3299755 CEBPB JASPAR yes 3294755 4989 87894512
SNPs associated with RGS12[ENSG00000159788.14], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr4 3408220 rs111781491 G A 0 Esophagus 0.147923 7357507
chr4 3386315 rs1894442 T C 0 Esophagus 0.000130598 7357261
chr4 3011253 rs55796435 C T 283502 Pancreas 0.184415 7355556
chr4 3834268 rs28578779 A G 392628 Spleen 0.154028 7361058
chr4 3323767 rs2857861 C T 0 Lung 3.22941e-06 7356776
chr4 3336806 rs34849917 A G 0 Stomach 0.374053 7356892
chr4 2785428 rs138815745 T C 509327 Adrenal 0.130742 7354369
Details of RGS12[ENSG00000159788.14]
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Genomic Location chr4:3294755-3441640[+]
TSS 3294755
Gene Name RGS12
Ensembl ID ENSG00000159788.14
ENTREZID 6002
Uniprot
O14924
Protein Name
RGS12 protein
RGS12TS isoform 2
Regulator of G-protein signaling 12
Regulator of G-protein signalling 12
Regulator of G-protein-signaling 12
Expression levels of RGS12[ENSG00000159788.14]
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