EnhancerDB
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Enhancers that regulate RNMTL1[ENSG00000171861.6]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 581785 587375 enh16916 685513 98138
Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Muscle (Myoblast) Muscle (Myotube)
chr17 592721 600015 enh16917 685513 85498
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Epithelial (MCF-7)
chr17 594616 594984 vista23618 685513 90529
VISTA
chr17 595370 595681 vista23619 685513 89832
VISTA
chr17 597415 597783 vista23620 685513 87730
VISTA
chr17 654300 654699 vista23621 685513 30814
VISTA
chr17 690489 700425 enh52399 685513 4976
Large Intestine Esophagus Muscle (A673) Colon (HCT116) Pancreas Uterus Stomach
chr17 693293 693510 vista23622 685513 7780
VISTA
chr17 698193 698349 vista23623 685513 12680
VISTA
chr17 730064 734402 enh102553 685513 44551
Bone (Osteoblast)
chr17 736421 741831 enh32035 685513 50908
Large Intestine Astrocyte Bone (Osteoblast) Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Stomach
chr17 748185 757455 enh32036 685513 62672
Esophagus Astrocyte Stomach Muscle (Myoblast) Uterus Heart
chr17 753267 753352 vista23624 685513 67754
VISTA
chr17 757505 766855 enh16918 685513 71992
Skin (Keratinocyte) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Kidney Uterus Heart
chr17 769365 796155 enh4193 685513 83852
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr17 773525 773702 vista23625 685513 88012
VISTA
Transcript facotrs that regulate RNMTL1[ENSG00000171861.6]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with RNMTL1[ENSG00000171861.6], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 677226 rs2750007 C T 8287 Esophagus 7.85884e-05 4685387
chr17 471335 rs60879573 T C 214178 Heart 0.00181437 4684385
chr17 789671 rs28647527 A G 93922 Ovary 0.366154 4686636
chr17 1466404 rs73298828 C T 770655 Liver 0.428721 4694587
chr17 677226 rs2750007 C T 8287 Stomach 0.00612217 4685387
Details of RNMTL1[ENSG00000171861.6]
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Genomic Location chr17:685513-695749[+]
TSS 685513
Gene Name RNMTL1
Ensembl ID ENSG00000171861.6
ENTREZID
Uniprot
Protein Name
mitochondrial
rRNA methyltransferase 3
Expression levels of RNMTL1[ENSG00000171861.6]
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