EnhancerDB
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Enhancers that regulate AGFG1[ENSG00000173744.13]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr2 228228665 228243595 enh34366 228336868 93273
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Astrocyte Muscle (A673) Lung (PC-9)
chr2 228236714 228236871 vista35015 228336868 99997
VISTA
chr2 228238680 228239026 vista35016 228336868 97842
VISTA
chr2 228248328 228248689 vista35017 228336868 88179
VISTA
chr2 228253438 228253721 vista35018 228336868 83147
VISTA
chr2 228254625 228287055 enh19284 228336868 49813
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 228270733 228271155 vista35019 228336868 65713
VISTA
chr2 228276107 228276256 vista35020 228336868 60612
VISTA
chr2 228280402 228280578 vista35021 228336868 56290
VISTA
chr2 228291685 228297615 enh53602 228336868 39253
Liver (HepG2) Large Intestine
chr2 228310265 228321555 enh34367 228336868 15313
Bone Marrow (K562) Liver (HepG2) Brain (SK-N-SH) Large Intestine Astrocyte Muscle (Myoblast) Stomach
chr2 228322694 228331795 enh19285 228336868 5073
Cervix (HeLa-S3) Large Intestine Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Lung (PC-9) Blood (T-cell) Stomach
chr2 228327180 228327582 vista35022 228336868 9286
VISTA
chr2 228331050 228331499 vista35023 228336868 5369
VISTA
chr2 228340085 228350161 enh6182 228336868 3217
Brain (SK-N-MC) Bone (Osteoblast) Blood (GM12878) Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Blood (T-cell)
chr2 228350705 228354855 enh112965 228336868 13837
Brain (SK-N-MC)
chr2 228362445 228384435 enh19286 228336868 25577
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Lung (PC-9) Esophagus Astrocyte Liver Stomach Placenta Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Heart
chr2 228428694 228432844 enh70193 228336868 91826
Neural Stem Cells (H9)
Transcript facotrs that regulate AGFG1[ENSG00000173744.13]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with AGFG1[ENSG00000173744.13], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr2 229020314 rs35344255 T C 594384 Esophagus 0.29484 6419798
chr2 228253296 rs75639111 C G 83572 Pancreas 0.192859 6414939
chr2 228658830 rs76941740 G A 232900 Liver 0.154709 6418224
chr2 228258191 rs796517872 GA G 78677 Lung 0.31412 6415015
Details of AGFG1[ENSG00000173744.13]
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Genomic Location chr2:228336868-228425930[+]
TSS 228336868
Gene Name AGFG1
Ensembl ID ENSG00000173744.13
ENTREZID 3267
Uniprot
A0A0S2Z3Y3
A0A0S2Z462
A0A0S2Z3Z1
A0A0S2Z444
P52594
Protein Name
Arf-GAP domain and FG repeat-containing protein 1
ArfGAP with FG repeats 1 isoform 1
ArfGAP with FG repeats 1 isoform 2
ArfGAP with FG repeats 1 isoform 3
ArfGAP with FG repeats 1 isoform 4
Expression levels of AGFG1[ENSG00000173744.13]
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