EnhancerDB
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Enhancers that regulate NDUFA13[ENSG00000186010.14]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 19526485 19536486 enh76119 19626545 90059
Bone (Osteoblast) Muscle (A673) Thyroid Pancreas Blood (T-cell)
chr19 19542705 19546855 enh92833 19626545 79690
Liver (HepG2)
chr19 19552805 19565255 enh5060 19626545 61290
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr19 19560401 19560757 vista28965 19626545 65788
VISTA
chr19 19562909 19563265 vista28966 19626545 63280
VISTA
chr19 19566985 19590795 enh5061 19626545 35750
Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr19 19570650 19571032 vista28967 19626545 55513
VISTA
chr19 19571175 19572073 vista28968 19626545 54472
VISTA
chr19 19572734 19572965 vista28969 19626545 53580
VISTA
chr19 19573019 19573301 vista28970 19626545 53244
VISTA
chr19 19574690 19574814 vista28971 19626545 51731
VISTA
chr19 19589693 19590012 vista28972 19626545 36533
VISTA
chr19 19591665 19603086 enh5062 19626545 23459
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr19 19600012 19600395 vista28973 19626545 26150
VISTA
chr19 19623798 19624201 vista28974 19626545 2344
VISTA
chr19 19658725 19667545 enh44636 19626545 32180
Muscle (Myotube) Prostate (RWPE1) Epithelial (MCF-7)
chr19 19685765 19689795 enh86315 19626545 59220
Colon (HCT116)
chr19 19698585 19728234 enh17985 19626545 72040
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
chr19 19701908 19702346 vista28975 19626545 75363
VISTA
chr19 19705357 19705479 vista28976 19626545 78812
VISTA
chr19 19708713 19709032 vista28977 19626545 82168
VISTA
chr19 19711724 19712118 vista28978 19626545 85179
VISTA
Transcript facotrs that regulate NDUFA13[ENSG00000186010.14]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 19623478 19624251 ZNF274 GTRD no Blood (GM12878) 19626545 2294 108400757
chr19 19623494 19624167 ZNF274 GTRD no Bone Marrow (K562) 19626545 2378 108400758
chr19 19623530 19624061 ZNF274 GTRD no Bone Marrow (K562) 19626545 2484 108400759
chr19 19623747 19624035 ZNF274 GTRD no Bone Marrow (K562) 19626545 2510 108400760
chr19 19623798 19623813 FOXP1 JASPAR yes 19626545 2732 70825507
chr19 19623799 19623814 FOXP1 JASPAR yes 19626545 2731 70825508
chr19 19623800 19623806 TBP TRANSFAC yes 19626545 2739 70825509
chr19 19623800 19623815 FOXP1 JASPAR yes 19626545 2730 70825510
chr19 19623800 19623821 IRF1 JASPAR yes 19626545 2724 70825511
chr19 19623801 19623816 FOXP1 JASPAR yes 19626545 2729 70825512
chr19 19623801 19623822 IRF1 JASPAR yes 19626545 2723 70825513
chr19 19623802 19623817 FOXP1 JASPAR yes 19626545 2728 70825514
chr19 19623802 19623823 IRF1 JASPAR yes 19626545 2722 70825515
chr19 19623803 19623818 FOXP1 JASPAR yes 19626545 2727 70825516
chr19 19623803 19623824 IRF1 JASPAR yes 19626545 2721 70825517
chr19 19623804 19623819 FOXP1 JASPAR yes 19626545 2726 70825518
chr19 19623804 19623825 IRF1 JASPAR yes 19626545 2720 70825519
chr19 19623805 19623820 FOXP1 JASPAR yes 19626545 2725 70825520
chr19 19623805 19623826 IRF1 JASPAR yes 19626545 2719 70825521
chr19 19623806 19623821 FOXP1 JASPAR yes 19626545 2724 70825522
chr19 19623806 19623827 IRF1 JASPAR yes 19626545 2718 70825523
chr19 19623807 19623822 FOXP1 JASPAR yes 19626545 2723 70825524
chr19 19623807 19623828 IRF1 JASPAR yes 19626545 2717 70825525
chr19 19623808 19623823 FOXP1 JASPAR yes 19626545 2722 70825526
chr19 19623808 19623829 IRF1 JASPAR yes 19626545 2716 70825527
chr19 19623809 19623824 FOXP1 JASPAR yes 19626545 2721 70825528
chr19 19623809 19623830 IRF1 JASPAR yes 19626545 2715 70825529
chr19 19623810 19623825 FOXP1 JASPAR yes 19626545 2720 70825530
chr19 19623810 19623831 IRF1 JASPAR yes 19626545 2714 70825531
chr19 19623811 19623826 FOXP1 JASPAR yes 19626545 2719 70825532
chr19 19623811 19623832 IRF1 JASPAR yes 19626545 2713 70825533
chr19 19623812 19623827 FOXP1 JASPAR yes 19626545 2718 70825534
chr19 19623812 19623833 IRF1 JASPAR yes 19626545 2712 70825535
chr19 19623813 19623828 FOXP1 JASPAR yes 19626545 2717 70825536
chr19 19623813 19623834 IRF1 JASPAR yes 19626545 2711 70825537
chr19 19623814 19623829 FOXP1 JASPAR yes 19626545 2716 70825538
chr19 19623815 19623830 FOXP1 JASPAR yes 19626545 2715 70825539
chr19 19623815 19623836 IRF1 JASPAR yes 19626545 2709 70825540
chr19 19623816 19623831 FOXP1 JASPAR yes 19626545 2714 70825541
chr19 19623816 19623837 IRF1 JASPAR yes 19626545 2708 70825542
chr19 19623817 19623832 FOXP1 JASPAR yes 19626545 2713 70825543
chr19 19623826 19623838 IRF1 JASPAR yes 19626545 2707 70825544
chr19 19623830 19623843 ZBTB18 JASPAR yes 19626545 2702 70825545
chr19 19623831 19623843 NHLH1 JASPAR yes 19626545 2702 70825546
chr19 19623831 19623843 PKNOX1 JASPAR yes 19626545 2702 70825547
chr19 19623832 19623842 NHLH1 JASPAR yes 19626545 2703 70825548
chr19 19623832 19623842 TFAP4 JASPAR yes 19626545 2703 70825549
chr19 19623845 19623860 FOXA1 JASPAR yes 19626545 2685 70825550
chr19 19623846 19623852 TCF4 TRANSFAC yes 19626545 2693 70825551
chr19 19623846 19623858 FOXI1 JASPAR yes 19626545 2687 70825552
chr19 19623846 19623861 FOXP1 JASPAR yes 19626545 2684 70825553
chr19 19623847 19623859 FOXC2 JASPAR yes 19626545 2686 70825554
chr19 19623849 19623860 FOXA1 JASPAR yes 19626545 2685 70825555
chr19 19623850 19623865 FOXP1 JASPAR yes 19626545 2680 70825556
chr19 19623868 19623883 IRF9 JASPAR yes 19626545 2662 70825557
chr19 19623870 19624684 ZNF274 GTRD no Blood (GM12878) 19626545 1861 108400761
chr19 19623912 19623929 ESR1 JASPAR yes 19626545 2616 70825558
chr19 19623926 19623936 MZF1 JASPAR yes 19626545 2609 70825559
chr19 19623929 19623935 SP1 TRANSFAC yes 19626545 2610 70825560
chr19 19623949 19623960 ELF5 JASPAR yes 19626545 2585 70825561
chr19 19623951 19623957 ETS1 JASPAR yes 19626545 2588 70825562
chr19 19623951 19623957 SPI1 JASPAR yes 19626545 2588 70825563
chr19 19623979 19624488 ZNF274 GTRD no Bone Marrow (K562) 19626545 2057 108400762
chr19 19623986 19623997 NRF1 JASPAR yes 19626545 2548 70825564
chr19 19623988 19623995 SP1 TRANSFAC yes 19626545 2550 70825565
chr19 19623988 19623998 SP1 JASPAR yes 19626545 2547 70825566
chr19 19623989 19623996 SP1 TRANSFAC yes 19626545 2549 70825567
chr19 19623990 19623995 SP1 TRANSFAC yes 19626545 2550 70825568
chr19 19623990 19623996 SP1 TRANSFAC yes 19626545 2549 70825569
chr19 19623990 19623997 SP1 TRANSFAC yes 19626545 2548 70825570
chr19 19623998 19624007 HIC2 JASPAR yes 19626545 2538 70825571
chr19 19624016 19624031 MEF2A JASPAR yes 19626545 2514 70825572
chr19 19624017 19624032 MEF2C JASPAR yes 19626545 2513 70825573
chr19 19624018 19624030 MEF2A JASPAR yes 19626545 2515 70825574
chr19 19624018 19624030 MEF2B JASPAR yes 19626545 2515 70825575
chr19 19624018 19624030 MEF2D JASPAR yes 19626545 2515 70825576
chr19 19624020 19624024 YY1 TRANSFAC yes 19626545 2521 70825577
chr19 19624063 19624081 RARA JASPAR yes 19626545 2464 70825578
chr19 19624070 19624083 NR2F1 JASPAR yes 19626545 2462 70825579
chr19 19624074 19624082 CREB1 JASPAR yes 19626545 2463 70825580
chr19 19624078 19624088 SREBF2 JASPAR yes 19626545 2457 70825581
chr19 19624078 19624089 USF1 JASPAR yes 19626545 2456 70825582
chr19 19624078 19624089 USF2 JASPAR yes 19626545 2456 70825583
chr19 19624081 19624094 NFKB1 JASPAR yes 19626545 2451 70825584
chr19 19624086 19624092 ZNF354C JASPAR yes 19626545 2453 70825585
chr19 19624091 19624105 PLAG1 JASPAR yes 19626545 2440 70825586
chr19 19624096 19624103 E2F1 TRANSFAC yes 19626545 2442 70825587
chr19 19624099 19624114 ZIC3 JASPAR yes 19626545 2431 70825588
chr19 19624128 19624147 REST JASPAR yes 19626545 2398 70825589
chr19 19624140 19624161 IRF1 JASPAR yes 19626545 2384 70825590
chr19 19624142 19624152 REL JASPAR yes 19626545 2393 70825591
chr19 19624142 19624163 IRF1 JASPAR yes 19626545 2382 70825592
chr19 19624146 19624160 IRF7 JASPAR yes 19626545 2385 70825593
chr19 19624146 19624167 IRF1 JASPAR yes 19626545 2378 70825594
chr19 19624147 19624162 FOXP1 JASPAR yes 19626545 2383 70825595
chr19 19624148 19624163 PRDM1 JASPAR yes 19626545 2382 70825596
chr19 19624148 19624163 STAT2 JASPAR yes 19626545 2382 70825597
chr19 19624151 19624883 ZNF274 GTRD no Blood (GM12878) 19626545 1662 108400763
chr19 19624152 19624173 IRF1 JASPAR yes 19626545 2372 70825598
chr19 19624154 19624169 PRDM1 JASPAR yes 19626545 2376 70825599
chr19 19624154 19624169 STAT2 JASPAR yes 19626545 2376 70825600
chr19 19624155 19624169 SPIC JASPAR yes 19626545 2376 70825601
chr19 19624155 19624169 STAT1 JASPAR yes 19626545 2376 70825602
chr19 19624157 19624172 FOXP1 JASPAR yes 19626545 2373 70825603
chr19 19624157 19624178 IRF1 JASPAR yes 19626545 2367 70825604
chr19 19624157 19624178 ZNF263 JASPAR yes 19626545 2367 70825605
chr19 19624158 19624179 IRF1 JASPAR yes 19626545 2366 70825606
chr19 19624159 19624174 FOXP1 JASPAR yes 19626545 2371 70825607
chr19 19624159 19624180 IRF1 JASPAR yes 19626545 2365 70825608
chr19 19624160 19624181 ZNF263 JASPAR yes 19626545 2364 70825609
chr19 19624163 19624184 IRF1 JASPAR yes 19626545 2361 70825610
chr19 19624164 19624179 FOXP1 JASPAR yes 19626545 2366 70825611
chr19 19624164 19624185 IRF1 JASPAR yes 19626545 2360 70825612
chr19 19624165 19624180 PRDM1 JASPAR yes 19626545 2365 70825613
chr19 19624165 19624186 IRF1 JASPAR yes 19626545 2359 70825614
chr19 19624169 19624190 IRF1 JASPAR yes 19626545 2355 70825615
chr19 19624170 19624191 IRF1 JASPAR yes 19626545 2354 70825616
chr19 19624171 19624176 ETS2 TRANSFAC yes 19626545 2369 70825617
chr19 19624171 19624192 IRF1 JASPAR yes 19626545 2353 70825618
chr19 19624172 19624193 IRF1 JASPAR yes 19626545 2352 70825619
chr19 19624173 19624188 FOXP1 JASPAR yes 19626545 2357 70825620
chr19 19624173 19624194 IRF1 JASPAR yes 19626545 2351 70825621
chr19 19624174 19624189 FOXP1 JASPAR yes 19626545 2356 70825622
chr19 19624174 19624195 IRF1 JASPAR yes 19626545 2350 70825623
chr19 19624175 19624190 FOXP1 JASPAR yes 19626545 2355 70825624
chr19 19624175 19624196 IRF1 JASPAR yes 19626545 2349 70825625
chr19 19624176 19624191 FOXP1 JASPAR yes 19626545 2354 70825626
chr19 19624176 19624197 IRF1 JASPAR yes 19626545 2348 70825627
chr19 19624176 19624902 ZNF274 GTRD no Blood (GM12878) 19626545 1643 108400764
chr19 19624177 19624192 FOXP1 JASPAR yes 19626545 2353 70825628
chr19 19624177 19624198 IRF1 JASPAR yes 19626545 2347 70825629
chr19 19624178 19624193 FOXP1 JASPAR yes 19626545 2352 70825630
chr19 19624178 19624199 IRF1 JASPAR yes 19626545 2346 70825631
chr19 19624178 19624711 TCF7L2 GTRD no Colon (HCT116) 19626545 1834 108400765
chr19 19624179 19624194 FOXP1 JASPAR yes 19626545 2351 70825632
chr19 19624179 19624200 IRF1 JASPAR yes 19626545 2345 70825633
chr19 19624180 19624195 FOXP1 JASPAR yes 19626545 2350 70825634
chr19 19624181 19624196 FOXP1 JASPAR yes 19626545 2349 70825635
chr19 19624182 19624197 FOXP1 JASPAR yes 19626545 2348 70825636
chr19 19624183 19624198 FOXP1 JASPAR yes 19626545 2347 70825637
chr19 19624184 19624199 FOXP1 JASPAR yes 19626545 2346 70825638
chr19 19624185 19624200 FOXP1 JASPAR yes 19626545 2345 70825639
chr19 19624186 19624201 FOXP1 JASPAR yes 19626545 2344 70825640
SNPs associated with NDUFA13[ENSG00000186010.14], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of NDUFA13[ENSG00000186010.14]
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Genomic Location chr19:19626545-19644285[+]
TSS 19626545
Gene Name NDUFA13
Ensembl ID ENSG00000186010.14
ENTREZID 51079
Uniprot
Q9P0J0
Protein Name
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13
Expression levels of NDUFA13[ENSG00000186010.14]
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