EnhancerDB
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Enhancers that regulate ARL4C[ENSG00000188042.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr2 235306693 235314094 enh45027 235405697 91603
Muscle (Myotube) Bone (Osteoblast)
chr2 235307381 235307726 vista35261 235405697 97971
VISTA
chr2 235311738 235312040 vista35262 235405697 93657
VISTA
chr2 235313758 235313869 vista35263 235405697 91828
VISTA
chr2 235314094 235314195 vista35264 235405697 91502
VISTA
chr2 235316925 235323827 enh19341 235405697 81870
Prostate (PC-3) Prostate (RWPE1) Blood (OCI-LY7) Placenta Muscle (Myotube)
chr2 235326485 235339375 enh19342 235405697 66322
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (GM12878) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Thymus Epithelial (MCF-7)
chr2 235330824 235331180 vista35265 235405697 74517
VISTA
chr2 235331545 235331768 vista35266 235405697 73929
VISTA
chr2 235334459 235335139 vista35267 235405697 70558
VISTA
chr2 235335674 235336048 vista35268 235405697 69649
VISTA
chr2 235336071 235336661 vista35269 235405697 69036
VISTA
chr2 235341825 235349515 enh53617 235405697 56182
Esophagus Blood (T-cell) Large Intestine Heart
chr2 235350952 235364170 enh19343 235405697 41527
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Stomach
chr2 235353626 235353934 vista35270 235405697 51763
VISTA
chr2 235354817 235355457 vista35271 235405697 50240
VISTA
chr2 235360536 235360912 vista35272 235405697 44785
VISTA
chr2 235366405 235380795 enh19344 235405697 24902
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Lung (PC-9) Pancreas (Panc1) Thymus Epithelial (MCF-7)
chr2 235372630 235373257 vista35273 235405697 32440
VISTA
chr2 235381945 235386355 enh104952 235405697 19342
Peripheral Blood (MM.1S) Blood (T-cell)
chr2 235383891 235384152 vista35274 235405697 21545
VISTA
chr2 235388083 235388436 vista35275 235405697 17261
VISTA
chr2 235389299 235394775 enh48438 235405697 10922
Peripheral Blood (MM.1S) Thymus Blood (OCI-LY7)
chr2 235392262 235392984 vista35276 235405697 12713
VISTA
chr2 235394925 235401188 enh48439 235405697 4509
Thymus Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (T-cell)
chr2 235397514 235398106 vista35277 235405697 7591
VISTA
chr2 235399360 235399773 vista35278 235405697 5924
VISTA
chr2 235399833 235400404 vista35279 235405697 5293
VISTA
chr2 235400661 235400783 vista35280 235405697 4914
VISTA
chr2 235419685 235424215 enh34410 235405697 13988
Bone Marrow (K562) Astrocyte
chr2 235428225 235432521 enh45028 235405697 22528
Muscle (Myotube)
chr2 235442125 235446275 enh53618 235405697 36428
Large Intestine
chr2 235451585 235469295 enh34411 235405697 45888
Prostate (PC-3) Brain (SK-N-MC) Lung (PC-9) Astrocyte Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Stomach
chr2 235457689 235457991 vista35281 235405697 51992
VISTA
chr2 235471264 235488095 enh6215 235405697 65567
Brain (SK-N-SH) Brain (SK-N-MC) Astrocyte Blood (OCI-LY7) Placenta Blood (Karpas-422)
chr2 235488105 235492255 enh112972 235405697 82408
Brain (SK-N-MC)
chr2 235494045 235498935 enh34412 235405697 88348
Astrocyte
chr2 235500259 235507704 enh45029 235405697 94562
Muscle (Myotube) Neural Stem Cells (H9)
Transcript facotrs that regulate ARL4C[ENSG00000188042.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr2 235400707 235400712 SP1 TRANSFAC yes 235405697 4985 22235654
chr2 235400707 235400712 SP1 TRANSFAC yes 235405697 4985 81884673
chr2 235400708 235400713 SP1 TRANSFAC yes 235405697 4984 22235655
chr2 235400708 235400713 SP1 TRANSFAC yes 235405697 4984 81884674
chr2 235400718 235400731 EOMES JASPAR yes 235405697 4966 22235656
chr2 235400718 235400731 EOMES JASPAR yes 235405697 4966 81884675
chr2 235400720 235400730 TBR1 JASPAR yes 235405697 4967 22235657
chr2 235400720 235400730 TBR1 JASPAR yes 235405697 4967 81884676
chr2 235400720 235400731 TBX20 JASPAR yes 235405697 4966 22235658
chr2 235400720 235400731 TBX2 JASPAR yes 235405697 4966 22235659
chr2 235400720 235400731 TBX20 JASPAR yes 235405697 4966 81884677
chr2 235400720 235400731 TBX2 JASPAR yes 235405697 4966 81884678
chr2 235400721 235400731 TBX21 JASPAR yes 235405697 4966 22235660
chr2 235400721 235400731 TBX21 JASPAR yes 235405697 4966 81884679
chr2 235400722 235400730 MGA JASPAR yes 235405697 4967 22235661
chr2 235400722 235400730 TBX1 JASPAR yes 235405697 4967 22235662
chr2 235400722 235400730 MGA JASPAR yes 235405697 4967 81884680
chr2 235400722 235400730 TBX1 JASPAR yes 235405697 4967 81884681
chr2 235400728 235400741 ZBTB18 JASPAR yes 235405697 4956 22235663
chr2 235400728 235400741 ZBTB18 JASPAR yes 235405697 4956 81884682
chr2 235400738 235400744 NFIC JASPAR yes 235405697 4953 22235664
chr2 235400738 235400744 NFIC JASPAR yes 235405697 4953 81884683
chr2 235400740 235400756 NFYA JASPAR yes 235405697 4941 22235665
chr2 235400740 235400756 NFYA JASPAR yes 235405697 4941 81884684
chr2 235400745 235400749 H1TF2 TRANSFAC yes 235405697 4948 22235666
chr2 235400745 235400749 NFE TRANSFAC yes 235405697 4948 22235667
chr2 235400745 235400749 SRF TRANSFAC yes 235405697 4948 22235668
chr2 235400745 235400749 H1TF2 TRANSFAC yes 235405697 4948 81884685
chr2 235400745 235400749 NFE TRANSFAC yes 235405697 4948 81884686
chr2 235400745 235400749 SRF TRANSFAC yes 235405697 4948 81884687
chr2 235400745 235400755 HOXB13 JASPAR yes 235405697 4942 22235669
chr2 235400745 235400755 HOXB13 JASPAR yes 235405697 4942 81884688
chr2 235400749 235400752 MYB TRANSFAC yes 235405697 4945 22235670
chr2 235400749 235400752 MYB TRANSFAC yes 235405697 4945 81884689
chr2 235400750 235400771 IRF1 JASPAR yes 235405697 4926 22235671
chr2 235400750 235400771 IRF1 JASPAR yes 235405697 4926 81884690
chr2 235400754 235400769 PRDM1 JASPAR yes 235405697 4928 22235672
chr2 235400754 235400769 STAT2 JASPAR yes 235405697 4928 22235673
chr2 235400754 235400769 PRDM1 JASPAR yes 235405697 4928 81884691
chr2 235400754 235400769 STAT2 JASPAR yes 235405697 4928 81884692
chr2 235400755 235400767 IRF1 JASPAR yes 235405697 4930 22235674
chr2 235400755 235400767 IRF1 JASPAR yes 235405697 4930 81884693
chr2 235400758 235400763 MYB TRANSFAC yes 235405697 4934 22235675
chr2 235400758 235400763 MYB TRANSFAC yes 235405697 4934 81884694
chr2 235400768 235400773 MYB TRANSFAC yes 235405697 4924 22235676
chr2 235400768 235400773 MYB TRANSFAC yes 235405697 4924 81884695
chr2 235400771 235400787 SOX4 JASPAR yes 235405697 4910 22235677
chr2 235400771 235400787 SOX4 JASPAR yes 235405697 4910 81884696
chr2 235400782 235400795 SMAD2 JASPAR yes 235405697 4902 22235678
chr2 235400782 235400795 SMAD2 JASPAR yes 235405697 4902 81884697
chr2 235400794 235400799 TFAP2A TRANSFAC yes 235405697 4898 81884698
chr2 235400794 235400800 MZF1 JASPAR yes 235405697 4897 81884699
chr2 235400797 235400802 GATA2 JASPAR yes 235405697 4895 81884700
chr2 235400806 235400815 ZEB1 JASPAR yes 235405697 4882 81884701
chr2 235400807 235400817 FIGLA JASPAR yes 235405697 4880 81884702
chr2 235400809 235400814 USF2 TRANSFAC yes 235405697 4883 81884703
chr2 235400815 235400836 ZNF263 JASPAR yes 235405697 4861 81884704
chr2 235400818 235400823 GATA2 JASPAR yes 235405697 4874 81884705
chr2 235400855 235400859 YY1 TRANSFAC yes 235405697 4838 81884706
chr2 235400856 235400869 JUN JASPAR yes 235405697 4828 81884707
chr2 235400859 235400867 RHOXF1 JASPAR yes 235405697 4830 81884708
chr2 235400865 235400878 POU2F2 JASPAR yes 235405697 4819 81884709
chr2 235400866 235400870 YY1 TRANSFAC yes 235405697 4827 81884710
chr2 235400866 235400878 POU3F1 JASPAR yes 235405697 4819 81884711
chr2 235400866 235400878 POU3F2 JASPAR yes 235405697 4819 81884712
chr2 235400867 235400879 POU2F1 JASPAR yes 235405697 4818 81884713
chr2 235400868 235400877 POU5F1B JASPAR yes 235405697 4820 81884714
chr2 235400869 235400877 FOXL1 JASPAR yes 235405697 4820 81884715
chr2 235400886 235400900 PLAG1 JASPAR yes 235405697 4797 81884716
chr2 235400891 235400906 PRDM1 JASPAR yes 235405697 4791 81884717
chr2 235400892 235400903 E2F6 JASPAR yes 235405697 4794 81884718
chr2 235400923 235400932 TFAP2A JASPAR yes 235405697 4765 81884719
chr2 235400929 235400939 NKX2-3 JASPAR yes 235405697 4758 81884720
chr2 235400930 235400939 NKX2-8 JASPAR yes 235405697 4758 81884721
chr2 235400934 235400948 RORA JASPAR yes 235405697 4749 81884722
chr2 235400946 235400964 NR3C1 JASPAR yes 235405697 4733 81884723
chr2 235400979 235400991 INSM1 JASPAR yes 235405697 4706 81884724
chr2 235401003 235401006 MYB TRANSFAC yes 235405697 4691 81884725
chr2 235401008 235401020 HNF1B JASPAR yes 235405697 4677 81884726
chr2 235401018 235401027 VENTX JASPAR yes 235405697 4670 81884727
chr2 235401018 235401028 GBX2 JASPAR yes 235405697 4669 81884728
chr2 235401018 235401028 HOXB3 JASPAR yes 235405697 4669 81884729
chr2 235401018 235401028 MNX1 JASPAR yes 235405697 4669 81884730
chr2 235401019 235401027 BARX1 JASPAR yes 235405697 4670 81884731
chr2 235401019 235401027 BSX JASPAR yes 235405697 4670 81884732
chr2 235401019 235401027 ISL2 JASPAR yes 235405697 4670 81884733
chr2 235401019 235401027 LMX1B JASPAR yes 235405697 4670 81884734
chr2 235401019 235401027 MSX1 JASPAR yes 235405697 4670 81884735
chr2 235401019 235401027 MSX2 JASPAR yes 235405697 4670 81884736
chr2 235401029 235401033 NFE TRANSFAC yes 235405697 4664 81884737
chr2 235401037 235401040 MYB TRANSFAC yes 235405697 4657 81884738
chr2 235401037 235401049 PKNOX1 JASPAR yes 235405697 4648 81884739
chr2 235401037 235401049 PKNOX2 JASPAR yes 235405697 4648 81884740
chr2 235401037 235401049 TGIF1 JASPAR yes 235405697 4648 81884741
chr2 235401037 235401049 TGIF2 JASPAR yes 235405697 4648 81884742
chr2 235401038 235401048 MSC JASPAR yes 235405697 4649 81884743
chr2 235401038 235401048 MYF6 JASPAR yes 235405697 4649 81884744
chr2 235401038 235401048 NHLH1 JASPAR yes 235405697 4649 81884745
chr2 235401038 235401048 TFAP4 JASPAR yes 235405697 4649 81884746
chr2 235401044 235401054 MAX JASPAR yes 235405697 4643 81884747
chr2 235401044 235401055 USF2 JASPAR yes 235405697 4642 81884748
chr2 235401044 235401056 HES5 JASPAR yes 235405697 4641 81884749
chr2 235401044 235401056 HES7 JASPAR yes 235405697 4641 81884750
chr2 235401045 235401055 BHLHE40 JASPAR yes 235405697 4642 81884751
chr2 235401045 235401055 HEY1 JASPAR yes 235405697 4642 81884752
chr2 235401045 235401055 HEY2 JASPAR yes 235405697 4642 81884753
chr2 235401045 235401055 MAX JASPAR yes 235405697 4642 81884754
chr2 235401045 235401055 MLX JASPAR yes 235405697 4642 81884755
chr2 235401045 235401055 MNT JASPAR yes 235405697 4642 81884756
chr2 235401045 235401055 TFE3 JASPAR yes 235405697 4642 81884757
chr2 235401045 235401055 TFEB JASPAR yes 235405697 4642 81884758
chr2 235401045 235401056 USF2 JASPAR yes 235405697 4641 81884759
chr2 235401046 235401053 USF1 JASPAR yes 235405697 4644 81884760
chr2 235401046 235401056 MAX JASPAR yes 235405697 4641 81884761
chr2 235401047 235401052 MYC TRANSFAC yes 235405697 4645 81884762
chr2 235401047 235401052 USF1 TRANSFAC yes 235405697 4645 81884763
chr2 235401047 235401052 USF2 TRANSFAC yes 235405697 4645 81884764
chr2 235401054 235401066 BHLHE23 JASPAR yes 235405697 4631 81884765
chr2 235401055 235401065 BHLHE22 JASPAR yes 235405697 4632 81884766
chr2 235401055 235401065 OLIG1 JASPAR yes 235405697 4632 81884767
chr2 235401055 235401065 OLIG2 JASPAR yes 235405697 4632 81884768
chr2 235401055 235401065 OLIG3 JASPAR yes 235405697 4632 81884769
chr2 235401073 235401092 REST JASPAR yes 235405697 4605 81884770
chr2 235401102 235401106 H1TF2 TRANSFAC yes 235405697 4591 81884771
chr2 235401102 235401106 NFE TRANSFAC yes 235405697 4591 81884772
chr2 235401102 235401106 SRF TRANSFAC yes 235405697 4591 81884773
chr2 235401109 235401113 YY1 TRANSFAC yes 235405697 4584 81884774
chr2 235401165 235401168 MYB TRANSFAC yes 235405697 4529 81884775
chr2 235401168 235401177 ZEB1 JASPAR yes 235405697 4520 81884776
chr2 235401169 235401179 FIGLA JASPAR yes 235405697 4518 81884777
chr2 235401169 235401179 ID4 JASPAR yes 235405697 4518 81884778
chr2 235401169 235401179 MSC JASPAR yes 235405697 4518 81884779
chr2 235401169 235401179 TCF3 JASPAR yes 235405697 4518 81884780
chr2 235401169 235401179 TCF4 JASPAR yes 235405697 4518 81884781
chr2 235401170 235401179 SNAI2 JASPAR yes 235405697 4518 81884782
chr2 235401171 235401176 USF2 TRANSFAC yes 235405697 4521 81884783
chr2 235401178 235401182 YY1 TRANSFAC yes 235405697 4515 81884784
SNPs associated with ARL4C[ENSG00000188042.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr2 235462839 rs73126817 C T 57142 Esophagus 0.207804 6454091
chr2 236112542 rs80265923 G A 706845 Esophagus 0.163353 6460533
chr2 235193147 rs62186784 A G 208538 Heart 0.00158032 6450997
chr2 235970630 rs10181320 G T 564933 Pancreas 0.257026 6459337
chr2 235742329 rs10203985 G A,T 336632 Breast 0.0454055 6456767
chr2 236353735 rs116039626 C T 948038 Spleen 0.101024 6463364
chr2 235921243 rs149467620 C A,T 515546 Uterus 0.459895 6458899
chr2 236170956 rs151331105 G A,T 765259 Liver 0.997783 6461151
chr2 235533187 rs116494577 G A 127490 Stomach 0.261636 6454953
Details of ARL4C[ENSG00000188042.5]
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Genomic Location chr2:235401685-235405697[-]
TSS 235405697
Gene Name ARL4C
Ensembl ID ENSG00000188042.5
ENTREZID 10123
Uniprot
A0A024R4C5
P56559
Protein Name
isoform CRA_a
ADP-ribosylation factor-like 4C
ADP-ribosylation factor-like protein 4C
Expression levels of ARL4C[ENSG00000188042.5]
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