EnhancerDB
  1. Home
  2. Gene
  3. KRT6A[ENSG00000205420.6]
Enhancers that regulate KRT6A[ENSG00000205420.6]
Back to top
Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr12 52807705 52815857 enh43740 52887041 71184
Epithelial (MCF-7) Prostate (RWPE1) Esophagus Lung Stomach Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
chr12 52808882 52809091 vista13474 52887041 77950
VISTA
chr12 52815165 52815335 vista13475 52887041 71706
VISTA
chr12 52827009 52839071 enh14730 52887041 47970
Skin (Keratinocyte) Prostate (PC-3) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr12 52835077 52835369 vista13476 52887041 51672
VISTA
chr12 52888449 52888608 vista13477 52887041 1408
VISTA
chr12 52889322 52889458 vista13478 52887041 2281
VISTA
chr12 52890343 52890794 vista13479 52887041 3302
VISTA
chr12 52892045 52897555 enh29577 52887041 5004
Astrocyte Prostate (PC-3)
chr12 52898846 52903280 enh43741 52887041 11805
Muscle (Myoblast) Skin (Keratinocyte) Muscle (Myotube)
chr12 52915277 52915747 vista13480 52887041 28236
VISTA
chr12 52916140 52916794 vista13481 52887041 29099
VISTA
chr12 52925985 52930535 enh2360 52887041 38944
Blood (Karpas-422)
chr12 52930659 52935855 enh80198 52887041 43618
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Pancreas (Panc1) Uterus Epithelial (MCF-7)
chr12 52950129 52950435 vista13482 52887041 63088
VISTA
chr12 52953745 52957895 enh101303 52887041 66704
Thyroid
chr12 52970209 52979212 enh47583 52887041 83168
Skin (Keratinocyte) Prostate (RWPE1) Esophagus Lung (A549) Lung (PC-9) Thymus
chr12 52973884 52973999 vista13483 52887041 86843
VISTA
Transcript facotrs that regulate KRT6A[ENSG00000205420.6]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr12 52887825 52888729 ZBTB33 GTRD no Lung (A549) 52887041 784 108033994
chr12 52887969 52888684 ZBTB33 GTRD no Lung (A549) 52887041 928 108033995
chr12 52888054 52888565 ZNF143 GTRD no Epithelial (MCF-7) 52887041 1013 108033996
chr12 52888102 52888549 ZNF143 GTRD no Epithelial (MCF-7) 52887041 1061 108033997
chr12 52888196 52888696 ZNF274 GTRD no Bone Marrow (K562) 52887041 1155 108033998
chr12 52888299 52888583 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 52887041 1258 108033999
chr12 52888299 52888606 NR3C1 UCSC Txn Factor no Conserved 52887041 1258 108034000
chr12 52888323 52888799 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 52887041 1282 108034001
chr12 52888367 52888711 STAT3 UCSC Txn Factor no Conserved 52887041 1326 108034002
chr12 52888367 52888711 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 52887041 1326 108034003
chr12 52888375 52888531 ZNF274 GTRD no Bone Marrow (K562) 52887041 1334 108034004
chr12 52888386 52888642 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 52887041 1345 108034005
chr12 52888386 52888665 CEBPB UCSC Txn Factor no Conserved 52887041 1345 108034006
chr12 52888388 52888512 YY1 GTRD no Embryonic Stem Cell Line (H1-hESC) 52887041 1347 108034007
chr12 52888416 52888600 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 52887041 1375 108034008
chr12 52888477 52888487 ELK3 JASPAR yes 52887041 1436 82407286
chr12 52888477 52888487 ETV1 JASPAR yes 52887041 1436 82407287
chr12 52888477 52888487 ETV4 JASPAR yes 52887041 1436 82407288
chr12 52888477 52888487 FEV JASPAR yes 52887041 1436 82407289
chr12 52888479 52888485 ETS1 JASPAR yes 52887041 1438 82407290
chr12 52888479 52888485 SPI1 JASPAR yes 52887041 1438 82407291
chr12 52888490 52888496 SP1 TRANSFAC yes 52887041 1449 82407292
chr12 52888490 52888500 SP1 JASPAR yes 52887041 1449 82407293
chr12 52888491 52888502 E2F6 JASPAR yes 52887041 1450 82407294
chr12 52888506 52888517 CEBPB JASPAR yes 52887041 1465 82407295
chr12 52888506 52888518 HLF JASPAR yes 52887041 1465 82407296
chr12 52888507 52888517 CEBPB JASPAR yes 52887041 1466 82407297
chr12 52888507 52888517 CEBPD JASPAR yes 52887041 1466 82407298
chr12 52888507 52888517 CEBPE JASPAR yes 52887041 1466 82407299
chr12 52888507 52888517 CEBPG JASPAR yes 52887041 1466 82407300
chr12 52888507 52888518 CEBPA JASPAR yes 52887041 1466 82407301
chr12 52888510 52888519 SOX9 JASPAR yes 52887041 1469 82407302
chr12 52888522 52888534 TEAD1 JASPAR yes 52887041 1481 82407303
chr12 52888542 52888557 STAT1 JASPAR yes 52887041 1501 82407304
chr12 52888544 52888555 STAT1 JASPAR yes 52887041 1503 82407305
chr12 52888544 52888555 STAT3 JASPAR yes 52887041 1503 82407306
chr12 52888545 52888553 STAT6 TRANSFAC yes 52887041 1504 82407307
chr12 52888561 52888566 ETS2 TRANSFAC yes 52887041 1520 82407308
chr12 52888564 52888579 HSF1 JASPAR yes 52887041 1523 82407309
chr12 52888591 52888605 EBF1 JASPAR yes 52887041 1550 82407310
chr12 52888592 52888603 EBF1 JASPAR yes 52887041 1551 82407311
chr12 52888593 52888604 EBF1 JASPAR yes 52887041 1552 82407312
chr12 52888600 52888605 GATA2 JASPAR yes 52887041 1559 82407313
chr12 52888799 52889580 ZBTB33 GTRD no Lung (A549) 52887041 1758 108034009
chr12 52888841 52889846 ZBTB33 GTRD no Lung (A549) 52887041 1800 108034010
chr12 52889216 52889522 CTCF UCSC Txn Factor no Conserved 52887041 2175 108034011
chr12 52889264 52889454 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 52887041 2223 108034012
chr12 52889341 52889355 ZIC1 JASPAR yes 52887041 2300 82407314
chr12 52889347 52889360 SMAD2 JASPAR yes 52887041 2306 82407315
chr12 52889350 52889354 LFA1 TRANSFAC yes 52887041 2309 82407316
chr12 52889364 52889369 SP1 TRANSFAC yes 52887041 2323 82407317
chr12 52889371 52889381 ZNF740 JASPAR yes 52887041 2330 82407318
chr12 52889398 52889403 NFY TRANSFAC yes 52887041 2357 82407319
chr12 52889403 52889424 ZNF263 JASPAR yes 52887041 2362 82407320
chr12 52889404 52889409 ETS2 TRANSFAC yes 52887041 2363 82407321
chr12 52889444 52889450 NFIC JASPAR yes 52887041 2403 82407322
chr12 52890202 52890802 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 52887041 3161 108034013
chr12 52890250 52890770 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 52887041 3209 108034014
chr12 52890268 52890678 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 52887041 3227 108034015
chr12 52890286 52890750 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 52887041 3245 108034016
chr12 52890296 52890876 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 52887041 3255 108034017
chr12 52890332 52890656 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 52887041 3291 108034018
chr12 52890348 52890369 ZNF263 JASPAR yes 52887041 3307 82407323
chr12 52890349 52890669 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 52887041 3308 108034019
chr12 52890356 52890732 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 52887041 3315 108034020
chr12 52890360 52890365 TFAP2A TRANSFAC yes 52887041 3319 82407324
chr12 52890360 52890366 MZF1 JASPAR yes 52887041 3319 82407325
chr12 52890362 52890367 ETS2 TRANSFAC yes 52887041 3321 82407326
chr12 52890372 52890682 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 52887041 3331 108034021
chr12 52890384 52890654 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 52887041 3343 108034022
chr12 52890388 52890403 LEF1 JASPAR yes 52887041 3347 82407327
chr12 52890393 52890399 SOX10 JASPAR yes 52887041 3352 82407328
chr12 52890397 52890411 RXRB JASPAR yes 52887041 3356 82407329
chr12 52890397 52890411 RXRG JASPAR yes 52887041 3356 82407330
chr12 52890398 52890658 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 52887041 3357 108034023
chr12 52890410 52890426 T JASPAR yes 52887041 3369 82407331
chr12 52890417 52890673 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 52887041 3376 108034024
chr12 52890425 52890437 IRF1 JASPAR yes 52887041 3384 82407332
chr12 52890439 52890453 JUN JASPAR yes 52887041 3398 82407333
chr12 52890439 52890723 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 52887041 3398 108034025
chr12 52890441 52890452 BATF JASPAR yes 52887041 3400 82407334
chr12 52890442 52890453 FOSL2 JASPAR yes 52887041 3401 82407335
chr12 52890442 52890453 JUNB JASPAR yes 52887041 3401 82407336
chr12 52890443 52890454 FOS JASPAR yes 52887041 3402 82407337
chr12 52890443 52890454 FOSL1 JASPAR yes 52887041 3402 82407338
chr12 52890443 52890461 MAFF JASPAR yes 52887041 3402 82407339
chr12 52890444 52890455 NFE2L2 JASPAR yes 52887041 3403 82407340
chr12 52890445 52890451 JUN TRANSFAC yes 52887041 3404 82407341
chr12 52890457 52890465 MEIS2 JASPAR yes 52887041 3416 82407342
chr12 52890457 52890465 MEIS3 JASPAR yes 52887041 3416 82407343
chr12 52890471 52890485 EBF1 JASPAR yes 52887041 3430 82407344
chr12 52890472 52890483 EBF1 JASPAR yes 52887041 3431 82407345
chr12 52890472 52890486 EBF1 JASPAR yes 52887041 3431 82407346
chr12 52890473 52890479 MZF1 JASPAR yes 52887041 3432 82407347
chr12 52890474 52890485 EBF1 JASPAR yes 52887041 3433 82407348
chr12 52890482 52890492 TFAP4 JASPAR yes 52887041 3441 82407349
chr12 52890488 52890502 NR2F1 JASPAR yes 52887041 3447 82407350
chr12 52890491 52890501 SP1 JASPAR yes 52887041 3450 82407351
chr12 52890501 52890506 ETS2 TRANSFAC yes 52887041 3460 82407352
chr12 52890506 52890619 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 52887041 3465 108034026
chr12 52890527 52890536 ZEB1 JASPAR yes 52887041 3486 82407353
chr12 52890528 52890536 TBX15 JASPAR yes 52887041 3487 82407354
chr12 52890529 52890534 SP1 TRANSFAC yes 52887041 3488 82407355
chr12 52890537 52890541 NFE TRANSFAC yes 52887041 3496 82407356
chr12 52890543 52890556 DUXA JASPAR yes 52887041 3502 82407357
chr12 52890544 52890555 DUX4 JASPAR yes 52887041 3503 82407358
chr12 52890550 52890562 TEAD1 JASPAR yes 52887041 3509 82407359
chr12 52890552 52890562 TEAD1 JASPAR yes 52887041 3511 82407360
chr12 52890552 52890562 TEAD4 JASPAR yes 52887041 3511 82407361
chr12 52890553 52890561 TEAD3 JASPAR yes 52887041 3512 82407362
chr12 52890568 52890574 LEF1 TRANSFAC yes 52887041 3527 82407363
chr12 52890568 52890574 SOX10 JASPAR yes 52887041 3527 82407364
chr12 52890583 52890593 GSC2 JASPAR yes 52887041 3542 82407365
chr12 52890583 52890593 GSC JASPAR yes 52887041 3542 82407366
chr12 52890584 52890592 OTX1 JASPAR yes 52887041 3543 82407367
chr12 52890584 52890592 OTX2 JASPAR yes 52887041 3543 82407368
chr12 52890584 52890592 RHOXF1 JASPAR yes 52887041 3543 82407369
chr12 52890584 52890593 PITX3 JASPAR yes 52887041 3543 82407370
chr12 52890589 52890592 MYB TRANSFAC yes 52887041 3548 82407371
chr12 52890605 52890620 RFX5 JASPAR yes 52887041 3564 82407372
chr12 52890616 52890637 ZNF263 JASPAR yes 52887041 3575 82407373
chr12 52890618 52890629 E2F6 JASPAR yes 52887041 3577 82407374
chr12 52890620 52890641 ZNF263 JASPAR yes 52887041 3579 82407375
chr12 52890630 52890641 E2F6 JASPAR yes 52887041 3589 82407376
chr12 52890650 52890657 JUN TRANSFAC yes 52887041 3609 82407377
chr12 52890656 52890666 NFATC3 JASPAR yes 52887041 3615 82407378
chr12 52890706 52890727 ZNF263 JASPAR yes 52887041 3665 82407379
chr12 52890713 52890719 NFIC JASPAR yes 52887041 3672 82407380
chr12 52890718 52890739 ZNF263 JASPAR yes 52887041 3677 82407381
chr12 52890737 52891001 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 52887041 3696 108034027
chr12 52891819 52892837 AR GTRD no Prostate (PC-3) 52887041 4778 21547051
SNPs associated with KRT6A[ENSG00000205420.6], confirmed by eQTL
Back to top
Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr12 52423472 rs398019588 A AAAAAACAAAAAC 457486 Esophagus 0.270819 2634707
chr12 53319639 rs61927926 A T 432598 Esophagus 0.157171 2643361
chr12 53782959 rs12368491 G A 895918 Heart 0.171009 2646080
chr12 53351540 rs145830391 C T 464499 Heart 0.0901526 2643568
chr12 52898777 rs796629554 CATT C 11736 Breast 0.000375139 2639270
chr12 53376796 rs12309376 A G 489755 Spleen 0.42022 2643914
chr12 52747149 rs1791649 T G 133809 Uterus 0.410385 2638378
chr12 52527963 rs112056154 G A 352995 Stomach 0.201521 2635792
Details of KRT6A[ENSG00000205420.6]
Back to top
Genomic Location chr12:52880958-52887041[-]
TSS 52887041
Gene Name KRT6A
Ensembl ID ENSG00000205420.6
ENTREZID 3853
Uniprot
P02538
A0A0S2Z428
Protein Name
isoform CRA_b
type II cytoskeletal 6A
HCG2039812
Keratin
Keratin 6A isoform 2
Expression levels of KRT6A[ENSG00000205420.6]
Back to top