EnhancerDB
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Enhancers that regulate PTPLB[ENSG00000206527.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr3 123204434 123208584 enh65735 123304032 95448
Heart
chr3 123229622 123229815 vista42198 123304032 74217
VISTA
chr3 123238145 123244255 enh48736 123304032 59777
Brain (SK-N-MC) Blood (T-cell) Stomach Peripheral Blood (MM.1S) Pancreas Spleen Thymus Heart
chr3 123241172 123241525 vista42199 123304032 62507
VISTA
chr3 123248345 123252495 enh105367 123304032 51537
Peripheral Blood (MM.1S)
chr3 123257165 123273195 enh35833 123304032 30837
Prostate (PC-3) Brain (SK-N-MC) Astrocyte Muscle (A673) Peripheral Blood (MM.1S)
chr3 123263878 123263964 vista42200 123304032 40068
VISTA
chr3 123286900 123291050 enh70831 123304032 12982
Neural Stem Cells (H9)
chr3 123293104 123297875 enh7495 123304032 6157
Muscle (A673) Blood (Karpas-422) Blood (GM12878)
chr3 123304962 123305362 vista42201 123304032 930
VISTA
chr3 123311925 123328095 enh7496 123304032 7893
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
chr3 123321303 123321432 vista42202 123304032 17271
VISTA
chr3 123324068 123324437 vista42203 123304032 20036
VISTA
chr3 123347665 123356335 enh20863 123304032 43633
Liver (HepG2) Ovary Bone (Osteoblast) Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr3 123351425 123351671 vista42204 123304032 47393
VISTA
chr3 123355394 123355731 vista42205 123304032 51362
VISTA
chr3 123356199 123356268 vista42206 123304032 52167
VISTA
chr3 123358215 123358608 vista42207 123304032 54183
VISTA
chr3 123359265 123365375 enh94525 123304032 55233
Spleen Stomach
chr3 123368888 123382915 enh20864 123304032 64856
Astrocyte Uterus Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Large Intestine Esophagus Placenta Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr3 123371138 123371512 vista42208 123304032 67106
VISTA
chr3 123372011 123372488 vista42209 123304032 67979
VISTA
chr3 123376969 123377163 vista42210 123304032 72937
VISTA
chr3 123379811 123380137 vista42211 123304032 75779
VISTA
chr3 123388051 123388291 vista42212 123304032 84019
VISTA
chr3 123391718 123392030 vista42213 123304032 87686
VISTA
chr3 123394784 123400915 enh35834 123304032 90752
Muscle (Myoblast) Astrocyte Epithelial (MCF-7)
chr3 123395755 123396140 vista42214 123304032 91723
VISTA
chr3 123396914 123397344 vista42215 123304032 92882
VISTA
chr3 123398747 123398958 vista42216 123304032 94715
VISTA
chr3 123403265 123416875 enh20865 123304032 99233
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Heart
Transcript facotrs that regulate PTPLB[ENSG00000206527.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr3 123303271 123305531 POLR2A UCSC Txn Factor no Conserved 123304032 761 108530096
chr3 123304963 123304969 SOX10 JASPAR yes 123304032 931 71040897
chr3 123304983 123304991 RHOXF1 JASPAR yes 123304032 951 71040898
chr3 123305007 123305020 SCRT2 JASPAR yes 123304032 975 71040899
chr3 123305016 123305020 ESR1 TRANSFAC yes 123304032 984 71040900
chr3 123305024 123305038 IRF8 JASPAR yes 123304032 992 71040901
chr3 123305025 123305035 TFCP2 JASPAR yes 123304032 993 71040902
chr3 123305030 123305050 RREB1 JASPAR yes 123304032 998 71040903
chr3 123305034 123305054 RREB1 JASPAR yes 123304032 1002 71040904
chr3 123305035 123305049 GLIS2 JASPAR yes 123304032 1003 71040905
chr3 123305035 123305049 GLIS3 JASPAR yes 123304032 1003 71040906
chr3 123305038 123305043 SP1 TRANSFAC yes 123304032 1006 71040907
chr3 123305038 123305048 ZNF740 JASPAR yes 123304032 1006 71040908
chr3 123305038 123305058 RREB1 JASPAR yes 123304032 1006 71040909
chr3 123305039 123305049 SP1 JASPAR yes 123304032 1007 71040910
chr3 123305039 123305049 ZNF740 JASPAR yes 123304032 1007 71040911
chr3 123305041 123305051 ZNF740 JASPAR yes 123304032 1009 71040912
chr3 123305045 123305061 ZNF143 JASPAR yes 123304032 1013 71040913
chr3 123305047 123305053 ZNF354C JASPAR yes 123304032 1015 71040914
chr3 123305069 123305075 TCF1 TRANSFAC yes 123304032 1037 71040915
chr3 123305077 123305081 YY1 TRANSFAC yes 123304032 1045 71040916
chr3 123305082 123305086 YY1 TRANSFAC yes 123304032 1050 71040917
chr3 123305089 123305093 YY1 TRANSFAC yes 123304032 1057 71040918
chr3 123305127 123305131 H1TF2 TRANSFAC yes 123304032 1095 71040919
chr3 123305127 123305131 NFE TRANSFAC yes 123304032 1095 71040920
chr3 123305127 123305131 SRF TRANSFAC yes 123304032 1095 71040921
chr3 123305166 123305179 JUN JASPAR yes 123304032 1134 71040922
chr3 123305167 123305180 ATF4 JASPAR yes 123304032 1135 71040923
chr3 123305191 123305201 SP1 JASPAR yes 123304032 1159 71040924
chr3 123305193 123305198 SP1 TRANSFAC yes 123304032 1161 71040925
chr3 123305230 123305251 ZNF263 JASPAR yes 123304032 1198 71040926
chr3 123305232 123305246 ZIC1 JASPAR yes 123304032 1200 71040927
chr3 123305232 123305247 ZIC3 JASPAR yes 123304032 1200 71040928
chr3 123305232 123305247 ZIC4 JASPAR yes 123304032 1200 71040929
chr3 123305258 123305261 MYB TRANSFAC yes 123304032 1226 71040930
chr3 123305270 123305275 NFY TRANSFAC yes 123304032 1238 71040931
chr3 123305278 123305282 NFE TRANSFAC yes 123304032 1246 71040932
chr3 123305279 123305284 GATA2 JASPAR yes 123304032 1247 71040933
chr3 123305285 123305300 TFAP2C JASPAR yes 123304032 1253 71040934
chr3 123305286 123305297 TFAP2A JASPAR yes 123304032 1254 71040935
chr3 123305286 123305297 TFAP2B JASPAR yes 123304032 1254 71040936
chr3 123305286 123305297 TFAP2C JASPAR yes 123304032 1254 71040937
chr3 123305287 123305296 TFAP2A JASPAR yes 123304032 1255 71040938
chr3 123305302 123305317 TFAP2A JASPAR yes 123304032 1270 71040939
chr3 123305302 123305317 TFAP2C JASPAR yes 123304032 1270 71040940
SNPs associated with PTPLB[ENSG00000206527.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr3 123348709 rs111321419 C T 44677 Esophagus 2.75335e-16 6992816
chr3 123264133 rs113600237 C G 0 Esophagus 0.0279682 6992303
chr3 124073040 rs7614068 G T 769008 Heart 0.266633 6996226
chr3 123371973 rs702032 C T 67941 Pancreas 0.0847251 6993055
chr3 122317017 rs114762040 C T 892650 Spleen 0.00987889 6987394
chr3 122756143 rs9842287 C T 453524 Uterus 0.424021 6989640
chr3 123967933 rs1550751 G C 663901 Adrenal 0.0377889 6995780
Details of PTPLB[ENSG00000206527.5]
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Genomic Location chr3:123209667-123304032[-]
TSS 123304032
Gene Name PTPLB
Ensembl ID ENSG00000206527.5
ENTREZID
Uniprot
Protein Name
Very-long-chain
Expression levels of PTPLB[ENSG00000206527.5]
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