EnhancerDB
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Enhancers that regulate CTC-260F20.3[ENSG00000258674.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 19526485 19536486 enh76119 19627036 90550
Bone (Osteoblast) Muscle (A673) Thyroid Pancreas Blood (T-cell)
chr19 19542705 19546855 enh92833 19627036 80181
Liver (HepG2)
chr19 19552805 19565255 enh5060 19627036 61781
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr19 19560401 19560757 vista28965 19627036 66279
VISTA
chr19 19562909 19563265 vista28966 19627036 63771
VISTA
chr19 19566985 19590795 enh5061 19627036 36241
Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr19 19570650 19571032 vista28967 19627036 56004
VISTA
chr19 19571175 19572073 vista28968 19627036 54963
VISTA
chr19 19572734 19572965 vista28969 19627036 54071
VISTA
chr19 19573019 19573301 vista28970 19627036 53735
VISTA
chr19 19574690 19574814 vista28971 19627036 52222
VISTA
chr19 19589693 19590012 vista28972 19627036 37024
VISTA
chr19 19591665 19603086 enh5062 19627036 23950
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr19 19600012 19600395 vista28973 19627036 26641
VISTA
chr19 19623798 19624201 vista28974 19627036 2835
VISTA
chr19 19658725 19667545 enh44636 19627036 31689
Muscle (Myotube) Prostate (RWPE1) Epithelial (MCF-7)
chr19 19685765 19689795 enh86315 19627036 58729
Colon (HCT116)
chr19 19698585 19728234 enh17985 19627036 71549
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
chr19 19701908 19702346 vista28975 19627036 74872
VISTA
chr19 19705357 19705479 vista28976 19627036 78321
VISTA
chr19 19708713 19709032 vista28977 19627036 81677
VISTA
chr19 19711724 19712118 vista28978 19627036 84688
VISTA
Transcript facotrs that regulate CTC-260F20.3[ENSG00000258674.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 19623478 19624251 ZNF274 GTRD no Blood (GM12878) 19627036 2785 108400757
chr19 19623494 19624167 ZNF274 GTRD no Bone Marrow (K562) 19627036 2869 108400758
chr19 19623530 19624061 ZNF274 GTRD no Bone Marrow (K562) 19627036 2975 108400759
chr19 19623747 19624035 ZNF274 GTRD no Bone Marrow (K562) 19627036 3001 108400760
chr19 19623798 19623813 FOXP1 JASPAR yes 19627036 3223 70825507
chr19 19623799 19623814 FOXP1 JASPAR yes 19627036 3222 70825508
chr19 19623800 19623806 TBP TRANSFAC yes 19627036 3230 70825509
chr19 19623800 19623815 FOXP1 JASPAR yes 19627036 3221 70825510
chr19 19623800 19623821 IRF1 JASPAR yes 19627036 3215 70825511
chr19 19623801 19623816 FOXP1 JASPAR yes 19627036 3220 70825512
chr19 19623801 19623822 IRF1 JASPAR yes 19627036 3214 70825513
chr19 19623802 19623817 FOXP1 JASPAR yes 19627036 3219 70825514
chr19 19623802 19623823 IRF1 JASPAR yes 19627036 3213 70825515
chr19 19623803 19623818 FOXP1 JASPAR yes 19627036 3218 70825516
chr19 19623803 19623824 IRF1 JASPAR yes 19627036 3212 70825517
chr19 19623804 19623819 FOXP1 JASPAR yes 19627036 3217 70825518
chr19 19623804 19623825 IRF1 JASPAR yes 19627036 3211 70825519
chr19 19623805 19623820 FOXP1 JASPAR yes 19627036 3216 70825520
chr19 19623805 19623826 IRF1 JASPAR yes 19627036 3210 70825521
chr19 19623806 19623821 FOXP1 JASPAR yes 19627036 3215 70825522
chr19 19623806 19623827 IRF1 JASPAR yes 19627036 3209 70825523
chr19 19623807 19623822 FOXP1 JASPAR yes 19627036 3214 70825524
chr19 19623807 19623828 IRF1 JASPAR yes 19627036 3208 70825525
chr19 19623808 19623823 FOXP1 JASPAR yes 19627036 3213 70825526
chr19 19623808 19623829 IRF1 JASPAR yes 19627036 3207 70825527
chr19 19623809 19623824 FOXP1 JASPAR yes 19627036 3212 70825528
chr19 19623809 19623830 IRF1 JASPAR yes 19627036 3206 70825529
chr19 19623810 19623825 FOXP1 JASPAR yes 19627036 3211 70825530
chr19 19623810 19623831 IRF1 JASPAR yes 19627036 3205 70825531
chr19 19623811 19623826 FOXP1 JASPAR yes 19627036 3210 70825532
chr19 19623811 19623832 IRF1 JASPAR yes 19627036 3204 70825533
chr19 19623812 19623827 FOXP1 JASPAR yes 19627036 3209 70825534
chr19 19623812 19623833 IRF1 JASPAR yes 19627036 3203 70825535
chr19 19623813 19623828 FOXP1 JASPAR yes 19627036 3208 70825536
chr19 19623813 19623834 IRF1 JASPAR yes 19627036 3202 70825537
chr19 19623814 19623829 FOXP1 JASPAR yes 19627036 3207 70825538
chr19 19623815 19623830 FOXP1 JASPAR yes 19627036 3206 70825539
chr19 19623815 19623836 IRF1 JASPAR yes 19627036 3200 70825540
chr19 19623816 19623831 FOXP1 JASPAR yes 19627036 3205 70825541
chr19 19623816 19623837 IRF1 JASPAR yes 19627036 3199 70825542
chr19 19623817 19623832 FOXP1 JASPAR yes 19627036 3204 70825543
chr19 19623826 19623838 IRF1 JASPAR yes 19627036 3198 70825544
chr19 19623830 19623843 ZBTB18 JASPAR yes 19627036 3193 70825545
chr19 19623831 19623843 NHLH1 JASPAR yes 19627036 3193 70825546
chr19 19623831 19623843 PKNOX1 JASPAR yes 19627036 3193 70825547
chr19 19623832 19623842 NHLH1 JASPAR yes 19627036 3194 70825548
chr19 19623832 19623842 TFAP4 JASPAR yes 19627036 3194 70825549
chr19 19623845 19623860 FOXA1 JASPAR yes 19627036 3176 70825550
chr19 19623846 19623852 TCF4 TRANSFAC yes 19627036 3184 70825551
chr19 19623846 19623858 FOXI1 JASPAR yes 19627036 3178 70825552
chr19 19623846 19623861 FOXP1 JASPAR yes 19627036 3175 70825553
chr19 19623847 19623859 FOXC2 JASPAR yes 19627036 3177 70825554
chr19 19623849 19623860 FOXA1 JASPAR yes 19627036 3176 70825555
chr19 19623850 19623865 FOXP1 JASPAR yes 19627036 3171 70825556
chr19 19623868 19623883 IRF9 JASPAR yes 19627036 3153 70825557
chr19 19623870 19624684 ZNF274 GTRD no Blood (GM12878) 19627036 2352 108400761
chr19 19623912 19623929 ESR1 JASPAR yes 19627036 3107 70825558
chr19 19623926 19623936 MZF1 JASPAR yes 19627036 3100 70825559
chr19 19623929 19623935 SP1 TRANSFAC yes 19627036 3101 70825560
chr19 19623949 19623960 ELF5 JASPAR yes 19627036 3076 70825561
chr19 19623951 19623957 ETS1 JASPAR yes 19627036 3079 70825562
chr19 19623951 19623957 SPI1 JASPAR yes 19627036 3079 70825563
chr19 19623979 19624488 ZNF274 GTRD no Bone Marrow (K562) 19627036 2548 108400762
chr19 19623986 19623997 NRF1 JASPAR yes 19627036 3039 70825564
chr19 19623988 19623995 SP1 TRANSFAC yes 19627036 3041 70825565
chr19 19623988 19623998 SP1 JASPAR yes 19627036 3038 70825566
chr19 19623989 19623996 SP1 TRANSFAC yes 19627036 3040 70825567
chr19 19623990 19623995 SP1 TRANSFAC yes 19627036 3041 70825568
chr19 19623990 19623996 SP1 TRANSFAC yes 19627036 3040 70825569
chr19 19623990 19623997 SP1 TRANSFAC yes 19627036 3039 70825570
chr19 19623998 19624007 HIC2 JASPAR yes 19627036 3029 70825571
chr19 19624016 19624031 MEF2A JASPAR yes 19627036 3005 70825572
chr19 19624017 19624032 MEF2C JASPAR yes 19627036 3004 70825573
chr19 19624018 19624030 MEF2A JASPAR yes 19627036 3006 70825574
chr19 19624018 19624030 MEF2B JASPAR yes 19627036 3006 70825575
chr19 19624018 19624030 MEF2D JASPAR yes 19627036 3006 70825576
chr19 19624020 19624024 YY1 TRANSFAC yes 19627036 3012 70825577
chr19 19624063 19624081 RARA JASPAR yes 19627036 2955 70825578
chr19 19624070 19624083 NR2F1 JASPAR yes 19627036 2953 70825579
chr19 19624074 19624082 CREB1 JASPAR yes 19627036 2954 70825580
chr19 19624078 19624088 SREBF2 JASPAR yes 19627036 2948 70825581
chr19 19624078 19624089 USF1 JASPAR yes 19627036 2947 70825582
chr19 19624078 19624089 USF2 JASPAR yes 19627036 2947 70825583
chr19 19624081 19624094 NFKB1 JASPAR yes 19627036 2942 70825584
chr19 19624086 19624092 ZNF354C JASPAR yes 19627036 2944 70825585
chr19 19624091 19624105 PLAG1 JASPAR yes 19627036 2931 70825586
chr19 19624096 19624103 E2F1 TRANSFAC yes 19627036 2933 70825587
chr19 19624099 19624114 ZIC3 JASPAR yes 19627036 2922 70825588
chr19 19624128 19624147 REST JASPAR yes 19627036 2889 70825589
chr19 19624140 19624161 IRF1 JASPAR yes 19627036 2875 70825590
chr19 19624142 19624152 REL JASPAR yes 19627036 2884 70825591
chr19 19624142 19624163 IRF1 JASPAR yes 19627036 2873 70825592
chr19 19624146 19624160 IRF7 JASPAR yes 19627036 2876 70825593
chr19 19624146 19624167 IRF1 JASPAR yes 19627036 2869 70825594
chr19 19624147 19624162 FOXP1 JASPAR yes 19627036 2874 70825595
chr19 19624148 19624163 PRDM1 JASPAR yes 19627036 2873 70825596
chr19 19624148 19624163 STAT2 JASPAR yes 19627036 2873 70825597
chr19 19624151 19624883 ZNF274 GTRD no Blood (GM12878) 19627036 2153 108400763
chr19 19624152 19624173 IRF1 JASPAR yes 19627036 2863 70825598
chr19 19624154 19624169 PRDM1 JASPAR yes 19627036 2867 70825599
chr19 19624154 19624169 STAT2 JASPAR yes 19627036 2867 70825600
chr19 19624155 19624169 SPIC JASPAR yes 19627036 2867 70825601
chr19 19624155 19624169 STAT1 JASPAR yes 19627036 2867 70825602
chr19 19624157 19624172 FOXP1 JASPAR yes 19627036 2864 70825603
chr19 19624157 19624178 IRF1 JASPAR yes 19627036 2858 70825604
chr19 19624157 19624178 ZNF263 JASPAR yes 19627036 2858 70825605
chr19 19624158 19624179 IRF1 JASPAR yes 19627036 2857 70825606
chr19 19624159 19624174 FOXP1 JASPAR yes 19627036 2862 70825607
chr19 19624159 19624180 IRF1 JASPAR yes 19627036 2856 70825608
chr19 19624160 19624181 ZNF263 JASPAR yes 19627036 2855 70825609
chr19 19624163 19624184 IRF1 JASPAR yes 19627036 2852 70825610
chr19 19624164 19624179 FOXP1 JASPAR yes 19627036 2857 70825611
chr19 19624164 19624185 IRF1 JASPAR yes 19627036 2851 70825612
chr19 19624165 19624180 PRDM1 JASPAR yes 19627036 2856 70825613
chr19 19624165 19624186 IRF1 JASPAR yes 19627036 2850 70825614
chr19 19624169 19624190 IRF1 JASPAR yes 19627036 2846 70825615
chr19 19624170 19624191 IRF1 JASPAR yes 19627036 2845 70825616
chr19 19624171 19624176 ETS2 TRANSFAC yes 19627036 2860 70825617
chr19 19624171 19624192 IRF1 JASPAR yes 19627036 2844 70825618
chr19 19624172 19624193 IRF1 JASPAR yes 19627036 2843 70825619
chr19 19624173 19624188 FOXP1 JASPAR yes 19627036 2848 70825620
chr19 19624173 19624194 IRF1 JASPAR yes 19627036 2842 70825621
chr19 19624174 19624189 FOXP1 JASPAR yes 19627036 2847 70825622
chr19 19624174 19624195 IRF1 JASPAR yes 19627036 2841 70825623
chr19 19624175 19624190 FOXP1 JASPAR yes 19627036 2846 70825624
chr19 19624175 19624196 IRF1 JASPAR yes 19627036 2840 70825625
chr19 19624176 19624191 FOXP1 JASPAR yes 19627036 2845 70825626
chr19 19624176 19624197 IRF1 JASPAR yes 19627036 2839 70825627
chr19 19624176 19624902 ZNF274 GTRD no Blood (GM12878) 19627036 2134 108400764
chr19 19624177 19624192 FOXP1 JASPAR yes 19627036 2844 70825628
chr19 19624177 19624198 IRF1 JASPAR yes 19627036 2838 70825629
chr19 19624178 19624193 FOXP1 JASPAR yes 19627036 2843 70825630
chr19 19624178 19624199 IRF1 JASPAR yes 19627036 2837 70825631
chr19 19624178 19624711 TCF7L2 GTRD no Colon (HCT116) 19627036 2325 108400765
chr19 19624179 19624194 FOXP1 JASPAR yes 19627036 2842 70825632
chr19 19624179 19624200 IRF1 JASPAR yes 19627036 2836 70825633
chr19 19624180 19624195 FOXP1 JASPAR yes 19627036 2841 70825634
chr19 19624181 19624196 FOXP1 JASPAR yes 19627036 2840 70825635
chr19 19624182 19624197 FOXP1 JASPAR yes 19627036 2839 70825636
chr19 19624183 19624198 FOXP1 JASPAR yes 19627036 2838 70825637
chr19 19624184 19624199 FOXP1 JASPAR yes 19627036 2837 70825638
chr19 19624185 19624200 FOXP1 JASPAR yes 19627036 2836 70825639
chr19 19624186 19624201 FOXP1 JASPAR yes 19627036 2835 70825640
SNPs associated with CTC-260F20.3[ENSG00000258674.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of CTC-260F20.3[ENSG00000258674.5]
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Genomic Location chr19:19627036-19646885[+]
TSS 19627036
Gene Name CTC-260F20.3
Ensembl ID ENSG00000258674.5
ENTREZID
Uniprot
Protein Name
Expression levels of CTC-260F20.3[ENSG00000258674.5]
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