EnhancerDB
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Enhancers that regulate SGSM2[ENSG00000141258.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 2131925 2147395 enh62579 2240792 93397
Brain (SK-N-SH) Prostate (RWPE1) Esophagus Bone (Osteoblast) Stomach Muscle (A673) Muscle (Myoblast) Pancreas Uterus Heart
chr17 2143435 2143643 vista23703 2240792 97149
VISTA
chr17 2144119 2144251 vista23704 2240792 96541
VISTA
chr17 2151386 2159691 enh32050 2240792 81101
Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Thymus
chr17 2160245 2169115 enh32051 2240792 71677
Skin (Keratinocyte) Prostate (PC-3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Peripheral Blood (MM.1S) Muscle (Myoblast) Muscle (Myotube) Uterus Thymus
chr17 2162010 2162402 vista23705 2240792 78390
VISTA
chr17 2163031 2163247 vista23706 2240792 77545
VISTA
chr17 2166387 2166805 vista23707 2240792 73987
VISTA
chr17 2167377 2167408 vista23708 2240792 73384
VISTA
chr17 2172005 2177535 enh107690 2240792 63257
Blood (T-cell) Lung (PC-9)
chr17 2179145 2184675 enh101494 2240792 56117
Thyroid
chr17 2191505 2195675 enh4209 2240792 45117
Peripheral Blood (MM.1S) Blood (Karpas-422)
chr17 2198811 2198924 vista23709 2240792 41868
VISTA
chr17 2241529 2241816 vista23710 2240792 737
VISTA
chr17 2244803 2253610 enh16932 2240792 4011
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
chr17 2253665 2259250 enh47991 2240792 12873
Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Spleen Thymus Epithelial (MCF-7)
chr17 2260605 2264770 enh32052 2240792 19813
Prostate (PC-3) Cervix (HeLa-S3) Esophagus Astrocyte Muscle (A673) Lung (PC-9) Pancreas
chr17 2268505 2272655 enh109742 2240792 27713
Stomach
chr17 2290037 2302995 enh4210 2240792 49245
Colon (HCT116) Bone (Osteoblast) Blood (Karpas-422)
chr17 2291927 2292298 vista23711 2240792 51135
VISTA
chr17 2299235 2299531 vista23712 2240792 58443
VISTA
chr17 2300026 2300553 vista23713 2240792 59234
VISTA
chr17 2302108 2302510 vista23714 2240792 61316
VISTA
chr17 2302778 2303366 vista23715 2240792 61986
VISTA
chr17 2305266 2305571 vista23716 2240792 64474
VISTA
chr17 2307434 2307709 vista23717 2240792 66642
VISTA
chr17 2307798 2307958 vista23718 2240792 67006
VISTA
chr17 2324290 2329106 enh62580 2240792 83498
Esophagus Prostate (RWPE1)
chr17 2335105 2339255 enh32053 2240792 94313
Astrocyte
Transcript facotrs that regulate SGSM2[ENSG00000141258.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 2237273 2242233 ZNF274 GTRD no Blood (GM12878) 2240792 1441 108230344
chr17 2239416 2241643 POLR2A UCSC Txn Factor no Conserved 2240792 851 108230345
chr17 2240909 2241579 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 2240792 117 108230346
chr17 2241091 2241747 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 2240792 299 108230347
chr17 2241145 2241665 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 2240792 353 108230348
chr17 2241217 2241637 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 2240792 425 108230349
chr17 2241240 2241550 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 2240792 448 108230350
chr17 2241280 2241590 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 2240792 488 108230351
chr17 2241318 2241562 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 2240792 526 108230352
chr17 2241403 2241593 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 2240792 611 108230353
chr17 2241455 2241551 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 2240792 663 108230354
chr17 2241523 2242372 TEF1 GTRD no Bone (Osteoblast) 2240792 731 108230355
chr17 2241529 2241540 TFAP2A JASPAR yes 2240792 737 21184180
chr17 2241529 2241540 TFAP2B JASPAR yes 2240792 737 21184181
chr17 2241529 2241541 TFAP2A JASPAR yes 2240792 737 21184182
chr17 2241558 2241569 E2F6 JASPAR yes 2240792 766 21184183
chr17 2241559 2241580 ZNF263 JASPAR yes 2240792 767 21184184
chr17 2241562 2241583 ZNF263 JASPAR yes 2240792 770 21184185
chr17 2241567 2241579 ZBTB7A JASPAR yes 2240792 775 21184186
chr17 2241568 2241573 SP1 TRANSFAC yes 2240792 776 21184187
chr17 2241582 2241902 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 2240792 790 108230356
chr17 2241610 2241870 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 2240792 818 108230357
chr17 2241616 2241619 MYB TRANSFAC yes 2240792 824 21184188
chr17 2241617 2241633 SOX8 JASPAR yes 2240792 825 21184189
chr17 2241619 2241631 EHF JASPAR yes 2240792 827 21184190
chr17 2241623 2241629 ETS1 JASPAR yes 2240792 831 21184191
chr17 2241623 2241629 SPI1 JASPAR yes 2240792 831 21184192
chr17 2241625 2241905 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 2240792 833 108230358
chr17 2241641 2241654 NFKB2 JASPAR yes 2240792 849 21184193
chr17 2241642 2241653 NFKB1 JASPAR yes 2240792 850 21184194
chr17 2241642 2241655 NFKB1 JASPAR yes 2240792 850 21184195
chr17 2241642 2241655 NFKB2 JASPAR yes 2240792 850 21184196
chr17 2241643 2241648 ETS2 TRANSFAC yes 2240792 851 21184197
chr17 2241643 2241653 NFKB1 JASPAR yes 2240792 851 21184198
chr17 2241643 2241653 RELA JASPAR yes 2240792 851 21184199
chr17 2241643 2241654 NFKB1 JASPAR yes 2240792 851 21184200
chr17 2241644 2241655 NFKB1 JASPAR yes 2240792 852 21184201
chr17 2241648 2241658 ZNF740 JASPAR yes 2240792 856 21184202
chr17 2241667 2241897 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 2240792 875 108230359
chr17 2241676 2241687 E2F6 JASPAR yes 2240792 884 21184203
chr17 2241679 2242179 ZNF274 GTRD no Liver (HepG2) 2240792 887 108230360
chr17 2241688 2241691 MYB TRANSFAC yes 2240792 896 21184204
chr17 2241693 2242226 ZNF274 GTRD no Liver (HepG2) 2240792 901 108230361
chr17 2241695 2241706 ESRRB JASPAR yes 2240792 903 21184205
chr17 2241705 2241715 SP1 JASPAR yes 2240792 913 21184206
chr17 2241705 2242242 ZBTB33 GTRD no Brain (SK-N-SH) 2240792 913 108230362
chr17 2241720 2242263 ZNF274 GTRD no Bone Marrow (K562) 2240792 928 108230363
chr17 2241721 2241725 YY1 TRANSFAC yes 2240792 929 21184207
chr17 2241727 2241731 YY1 TRANSFAC yes 2240792 935 21184208
chr17 2241733 2242174 ZBTB33 GTRD no Brain (SK-N-SH) 2240792 941 108230364
chr17 2241734 2241739 SP1 TRANSFAC yes 2240792 942 21184209
chr17 2241740 2241744 LFA1 TRANSFAC yes 2240792 948 21184210
chr17 2241749 2241759 MAX JASPAR yes 2240792 957 21184211
chr17 2241752 2241766 JUN JASPAR yes 2240792 960 21184212
chr17 2241754 2241765 BATF JASPAR yes 2240792 962 21184213
chr17 2241755 2241766 FOSL2 JASPAR yes 2240792 963 21184214
chr17 2241755 2241766 JUNB JASPAR yes 2240792 963 21184215
chr17 2241756 2241767 FOS JASPAR yes 2240792 964 21184216
chr17 2241756 2241767 FOSL1 JASPAR yes 2240792 964 21184217
chr17 2241756 2241767 JUND JASPAR yes 2240792 964 21184218
chr17 2241756 2241767 NFE2 JASPAR yes 2240792 964 21184219
chr17 2241757 2241766 JDP2 JASPAR yes 2240792 965 21184220
chr17 2241757 2241768 FOSL2 JASPAR yes 2240792 965 21184221
chr17 2241757 2241768 JUNB JASPAR yes 2240792 965 21184222
chr17 2241757 2241771 JUN JASPAR yes 2240792 965 21184223
chr17 2241769 2242171 ZBTB33 GTRD no Brain (SK-N-SH) 2240792 977 108230365
chr17 2241780 2242144 ZBTB33 GTRD no Brain (SK-N-SH) 2240792 988 108230366
chr17 2241789 2242328 ZBTB33 GTRD no Brain (SK-N-SH) 2240792 997 108230367
chr17 2241790 2241805 RUNX2 JASPAR yes 2240792 998 21184224
chr17 2241799 2241811 NHLH1 JASPAR yes 2240792 1007 21184225
chr17 2241800 2242235 ZNF274 GTRD no Liver (HepG2) 2240792 1008 108230368
SNPs associated with SGSM2[ENSG00000141258.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 2782699 rs8070504 T C 498347 Esophagus 0.139039 4705128
chr17 2775203 rs4790375 A G 490851 Heart 0.32187 4704951
chr17 2248007 rs36016032 CAT C 0 Pancreas 0.00318832 4701216
chr17 2770129 rs59466958 A G 485777 Spleen 0.0700916 4704851
chr17 2830671 rs190961792 T A,C 546319 Ovary 0.0394307 4705709
chr17 2251059 rs7213791 G A 0 Liver 0.00649238 4701249
Details of SGSM2[ENSG00000141258.8]
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Genomic Location chr17:2240792-2284352[+]
TSS 2240792
Gene Name SGSM2
Ensembl ID ENSG00000141258.8
ENTREZID 9905
Uniprot
O43147
B9A6J3
Protein Name
Small G protein signaling modulator 2
Small G protein-signaling modulator 2
Expression levels of SGSM2[ENSG00000141258.8]
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