EnhancerDB
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Enhancers that regulate VANGL1[ENSG00000173218.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 116084825 116092215 enh12178 116184574 92359
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Breast Uterus Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr1 116087444 116087828 vista3036 116184574 96746
VISTA
chr1 116088478 116088732 vista3037 116184574 95842
VISTA
chr1 116136294 116141275 enh27093 116184574 43299
Prostate (PC-3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (PC-9) Muscle (Myoblast)
chr1 116148899 116153935 enh64101 116184574 30639
Lung (PC-9) Heart
chr1 116171126 116177495 enh67107 116184574 7079
Neural Stem Cells (H9)
chr1 116187765 116201595 enh27094 116184574 3191
Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr1 116191587 116191760 vista3038 116184574 7013
VISTA
chr1 116192035 116192337 vista3039 116184574 7461
VISTA
chr1 116192575 116192950 vista3040 116184574 8001
VISTA
chr1 116206025 116211595 enh79193 116184574 21451
Pancreas Prostate (PC-3)
chr1 116217225 116224023 enh27095 116184574 32651
Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Lung (PC-9) Uterus Heart
chr1 116221756 116221883 vista3041 116184574 37182
VISTA
chr1 116249565 116259755 enh12179 116184574 64991
Prostate (PC-3) Kidney Epithelial (MCF-7) Large Intestine Esophagus Stomach Placenta Thyroid Lung (PC-9) Pancreas Thymus Heart
chr1 116253956 116254148 vista3042 116184574 69382
VISTA
chr1 116270505 116274655 enh101140 116184574 85931
Thyroid
Transcript facotrs that regulate VANGL1[ENSG00000173218.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 116187765 116187772 SPIB JASPAR yes 116184574 3191 31749554
chr1 116187766 116187786 ESR1 JASPAR yes 116184574 3192 31749555
chr1 116187770 116187788 ESR2 JASPAR yes 116184574 3196 31749556
chr1 116187771 116187786 ESR2 JASPAR yes 116184574 3197 31749557
chr1 116187783 116187787 YY1 TRANSFAC yes 116184574 3209 31749558
chr1 116187798 116187803 TFAP2A TRANSFAC yes 116184574 3224 31749559
chr1 116187798 116187804 MZF1 JASPAR yes 116184574 3224 31749560
chr1 116187837 116187852 SCRT1 JASPAR yes 116184574 3263 31749561
chr1 116187859 116187871 MEF2D JASPAR yes 116184574 3285 31749562
chr1 116187860 116187870 MEF2A JASPAR yes 116184574 3286 31749563
chr1 116187905 116187909 TEAD2 TRANSFAC yes 116184574 3331 31749564
chr1 116187914 116187929 IRF9 JASPAR yes 116184574 3340 31749565
chr1 116187915 116187929 IRF8 JASPAR yes 116184574 3341 31749566
chr1 116187920 116187931 DMRT3 JASPAR yes 116184574 3346 31749567
chr1 116187964 116187967 MYB TRANSFAC yes 116184574 3390 31749568
chr1 116187970 116187975 ETS2 TRANSFAC yes 116184574 3396 31749569
chr1 116187970 116187980 TEAD4 JASPAR yes 116184574 3396 31749570
chr1 116188003 116188010 MEIS1 JASPAR yes 116184574 3429 31749571
chr1 116188003 116188011 MEIS2 JASPAR yes 116184574 3429 31749572
chr1 116188003 116188011 MEIS3 JASPAR yes 116184574 3429 31749573
chr1 116188003 116188016 ZBTB18 JASPAR yes 116184574 3429 31749574
chr1 116188004 116188016 PKNOX1 JASPAR yes 116184574 3430 31749575
chr1 116188004 116188016 PKNOX2 JASPAR yes 116184574 3430 31749576
chr1 116188004 116188016 TGIF1 JASPAR yes 116184574 3430 31749577
chr1 116188004 116188016 TGIF2 JASPAR yes 116184574 3430 31749578
chr1 116188005 116188015 MSC JASPAR yes 116184574 3431 31749579
chr1 116188005 116188015 MYF6 JASPAR yes 116184574 3431 31749580
chr1 116188005 116188015 NHLH1 JASPAR yes 116184574 3431 31749581
chr1 116188005 116188015 TFAP4 JASPAR yes 116184574 3431 31749582
chr1 116188021 116188031 MAX JASPAR yes 116184574 3447 31749583
chr1 116188021 116188033 HES5 JASPAR yes 116184574 3447 31749584
chr1 116188022 116188032 CLOCK JASPAR yes 116184574 3448 31749585
chr1 116188022 116188032 MAX JASPAR yes 116184574 3448 31749586
chr1 116188022 116188032 MLXIPL JASPAR yes 116184574 3448 31749587
chr1 116188022 116188032 MLX JASPAR yes 116184574 3448 31749588
chr1 116188022 116188032 MNT JASPAR yes 116184574 3448 31749589
chr1 116188022 116188032 TFE3 JASPAR yes 116184574 3448 31749590
chr1 116188022 116188032 TFEB JASPAR yes 116184574 3448 31749591
chr1 116188022 116188032 TFEC JASPAR yes 116184574 3448 31749592
chr1 116188023 116188030 USF1 JASPAR yes 116184574 3449 31749593
chr1 116188023 116188033 MAX JASPAR yes 116184574 3449 31749594
chr1 116188024 116188029 MYC TRANSFAC yes 116184574 3450 31749595
chr1 116188024 116188029 USF1 TRANSFAC yes 116184574 3450 31749596
chr1 116188024 116188029 USF2 TRANSFAC yes 116184574 3450 31749597
chr1 116188049 116188060 HOXA10 JASPAR yes 116184574 3475 31749598
chr1 116188057 116188072 JUND JASPAR yes 116184574 3483 31749599
chr1 116188065 116188069 YY1 TRANSFAC yes 116184574 3491 31749600
chr1 116188075 116188086 RUNX1 JASPAR yes 116184574 3501 31749601
chr1 116188087 116188091 TEAD2 TRANSFAC yes 116184574 3513 31749602
chr1 116188092 116188096 TEAD2 TRANSFAC yes 116184574 3518 31749603
chr1 116188094 116188101 NKX3-1 JASPAR yes 116184574 3520 31749604
chr1 116188111 116188122 DMRT3 JASPAR yes 116184574 3537 31749605
chr1 116188119 116188134 PRDM1 JASPAR yes 116184574 3545 31749606
chr1 116188147 116188154 NKX3-1 JASPAR yes 116184574 3573 31749607
chr1 116188151 116188154 MYB TRANSFAC yes 116184574 3577 31749608
chr1 116188160 116188173 NR2F1 JASPAR yes 116184574 3586 31749609
chr1 116188161 116188169 CREB1 JASPAR yes 116184574 3587 31749610
chr1 116188162 116188170 NR4A2 JASPAR yes 116184574 3588 31749611
chr1 116188163 116188178 ESR2 JASPAR yes 116184574 3589 31749612
chr1 116188164 116188168 ESR1 TRANSFAC yes 116184574 3590 31749613
chr1 116188173 116188181 FOXC1 JASPAR yes 116184574 3599 31749614
chr1 116188175 116188182 NKX3-1 JASPAR yes 116184574 3601 31749615
chr1 116188248 116188263 FOXP1 JASPAR yes 116184574 3674 31749616
chr1 116188252 116188260 FOXO3 JASPAR yes 116184574 3678 31749617
chr1 116188264 116188268 YY1 TRANSFAC yes 116184574 3690 31749618
chr1 116188266 116188284 IRF2 JASPAR yes 116184574 3692 31749619
chr1 116188270 116188288 RARA JASPAR yes 116184574 3696 31749620
chr1 116188271 116188283 IRF1 JASPAR yes 116184574 3697 31749621
chr1 116188275 116188290 PRDM1 JASPAR yes 116184574 3701 31749622
chr1 116188294 116188298 YY1 TRANSFAC yes 116184574 3720 31749623
chr1 116188296 116188306 ALX3 JASPAR yes 116184574 3722 31749624
chr1 116188296 116188306 GSX1 JASPAR yes 116184574 3722 31749625
chr1 116188296 116188306 GSX2 JASPAR yes 116184574 3722 31749626
chr1 116188296 116188306 MIXL1 JASPAR yes 116184574 3722 31749627
chr1 116188296 116188306 MNX1 JASPAR yes 116184574 3722 31749628
chr1 116188296 116188306 NOTO JASPAR yes 116184574 3722 31749629
chr1 116188297 116188305 ISX JASPAR yes 116184574 3723 31749630
chr1 116188297 116188305 LMX1A JASPAR yes 116184574 3723 31749631
chr1 116188297 116188305 LMX1B JASPAR yes 116184574 3723 31749632
chr1 116188297 116188305 NKX6-1 JASPAR yes 116184574 3723 31749633
chr1 116188297 116188305 NKX6-2 JASPAR yes 116184574 3723 31749634
chr1 116188297 116188305 PRRX1 JASPAR yes 116184574 3723 31749635
chr1 116188297 116188305 RAX2 JASPAR yes 116184574 3723 31749636
chr1 116188297 116188305 SHOX JASPAR yes 116184574 3723 31749637
chr1 116188297 116188305 UNCX JASPAR yes 116184574 3723 31749638
chr1 116188297 116188305 VAX1 JASPAR yes 116184574 3723 31749639
chr1 116188319 116188331 TEAD1 JASPAR yes 116184574 3745 31749640
chr1 116188342 116188356 POU1F1 JASPAR yes 116184574 3768 31749641
chr1 116188342 116188357 MEF2C JASPAR yes 116184574 3768 31749642
chr1 116188343 116188356 POU3F3 JASPAR yes 116184574 3769 31749643
chr1 116188343 116188358 FOXA1 JASPAR yes 116184574 3769 31749644
chr1 116188344 116188355 FOXB1 JASPAR yes 116184574 3770 31749645
chr1 116188344 116188355 FOXC1 JASPAR yes 116184574 3770 31749646
chr1 116188344 116188356 FOXC2 JASPAR yes 116184574 3770 31749647
chr1 116188344 116188356 MEF2A JASPAR yes 116184574 3770 31749648
chr1 116188344 116188356 MEF2B JASPAR yes 116184574 3770 31749649
chr1 116188344 116188356 MEF2D JASPAR yes 116184574 3770 31749650
chr1 116188345 116188355 MEF2A JASPAR yes 116184574 3771 31749651
chr1 116188345 116188357 FOXI1 JASPAR yes 116184574 3771 31749652
chr1 116188346 116188350 TEAD2 TRANSFAC yes 116184574 3772 31749653
chr1 116188346 116188351 TBP TRANSFAC yes 116184574 3772 31749654
chr1 116188346 116188352 TMF TRANSFAC yes 116184574 3772 31749655
chr1 116188349 116188364 HNF1A JASPAR yes 116184574 3775 31749656
chr1 116188350 116188363 HNF1B JASPAR yes 116184574 3776 31749657
chr1 116188350 116188364 POU4F1 JASPAR yes 116184574 3776 31749658
chr1 116188350 116188366 POU4F2 JASPAR yes 116184574 3776 31749659
chr1 116188350 116188366 POU4F3 JASPAR yes 116184574 3776 31749660
chr1 116188353 116188363 LHX6 JASPAR yes 116184574 3779 31749661
chr1 116188353 116188363 MNX1 JASPAR yes 116184574 3779 31749662
chr1 116188353 116188363 POU6F1 JASPAR yes 116184574 3779 31749663
chr1 116188354 116188362 LMX1A JASPAR yes 116184574 3780 31749664
chr1 116188354 116188362 LMX1B JASPAR yes 116184574 3780 31749665
chr1 116188354 116188362 NKX6-1 JASPAR yes 116184574 3780 31749666
chr1 116188354 116188362 NKX6-2 JASPAR yes 116184574 3780 31749667
chr1 116188354 116188362 VAX1 JASPAR yes 116184574 3780 31749668
chr1 116188354 116188362 VAX2 JASPAR yes 116184574 3780 31749669
chr1 116188354 116188362 VSX1 JASPAR yes 116184574 3780 31749670
chr1 116188354 116188362 VSX2 JASPAR yes 116184574 3780 31749671
chr1 116188358 116188370 POU3F1 JASPAR yes 116184574 3784 31749672
chr1 116188358 116188371 POU3F3 JASPAR yes 116184574 3784 31749673
chr1 116188384 116188392 FOXL1 JASPAR yes 116184574 3810 31749674
chr1 116188384 116188393 POU5F1B JASPAR yes 116184574 3810 31749675
chr1 116188388 116188402 ONECUT2 JASPAR yes 116184574 3814 31749676
chr1 116188388 116188402 ONECUT3 JASPAR yes 116184574 3814 31749677
chr1 116188390 116188406 POU4F2 JASPAR yes 116184574 3816 31749678
chr1 116188390 116188406 POU4F3 JASPAR yes 116184574 3816 31749679
chr1 116188392 116188406 POU4F1 JASPAR yes 116184574 3818 31749680
chr1 116188424 116188428 TEAD2 TRANSFAC yes 116184574 3850 31749681
chr1 116188453 116188458 ETS2 TRANSFAC yes 116184574 3879 31749682
chr1 116188473 116188494 MAFG JASPAR yes 116184574 3899 31749683
chr1 116188522 116188525 MYB TRANSFAC yes 116184574 3948 31749684
chr1 116188530 116188536 SOX10 JASPAR yes 116184574 3956 31749685
chr1 116188536 116188539 MYB TRANSFAC yes 116184574 3962 31749686
chr1 116188558 116188568 EMX1 JASPAR yes 116184574 3984 31749687
chr1 116188558 116188568 EMX2 JASPAR yes 116184574 3984 31749688
chr1 116188558 116188568 GBX2 JASPAR yes 116184574 3984 31749689
chr1 116188558 116188568 HOXB2 JASPAR yes 116184574 3984 31749690
chr1 116188558 116188568 HOXB3 JASPAR yes 116184574 3984 31749691
chr1 116188558 116188568 LHX6 JASPAR yes 116184574 3984 31749692
chr1 116188558 116188568 MEOX1 JASPAR yes 116184574 3984 31749693
chr1 116188558 116188568 MEOX2 JASPAR yes 116184574 3984 31749694
chr1 116188558 116188568 MNX1 JASPAR yes 116184574 3984 31749695
chr1 116188558 116188568 POU6F1 JASPAR yes 116184574 3984 31749696
chr1 116188559 116188567 LMX1A JASPAR yes 116184574 3985 31749697
chr1 116188559 116188567 LMX1B JASPAR yes 116184574 3985 31749698
chr1 116188559 116188567 NKX6-1 JASPAR yes 116184574 3985 31749699
chr1 116188559 116188567 NKX6-2 JASPAR yes 116184574 3985 31749700
chr1 116188559 116188567 PDX1 JASPAR yes 116184574 3985 31749701
chr1 116188559 116188567 VAX1 JASPAR yes 116184574 3985 31749702
chr1 116188559 116188567 VAX2 JASPAR yes 116184574 3985 31749703
chr1 116188559 116188567 VSX1 JASPAR yes 116184574 3985 31749704
chr1 116188563 116188570 NKX3-1 JASPAR yes 116184574 3989 31749705
chr1 116188570 116188589 REST JASPAR yes 116184574 3996 31749706
chr1 116188592 116188603 FOXC1 JASPAR yes 116184574 4018 31749707
chr1 116188599 116188603 TEAD2 TRANSFAC yes 116184574 4025 31749708
chr1 116188603 116188611 FEV JASPAR yes 116184574 4029 31749709
chr1 116188605 116188610 ETS2 TRANSFAC yes 116184574 4031 31749710
chr1 116188622 116188634 BHLHE23 JASPAR yes 116184574 4048 31749711
chr1 116188623 116188633 OLIG1 JASPAR yes 116184574 4049 31749712
chr1 116188627 116188635 FOXL1 JASPAR yes 116184574 4053 31749713
chr1 116188627 116188638 FOXP2 JASPAR yes 116184574 4053 31749714
chr1 116188627 116188641 FOXF2 JASPAR yes 116184574 4053 31749715
chr1 116188628 116188636 FOXD1 JASPAR yes 116184574 4054 31749716
chr1 116188628 116188636 FOXG1 JASPAR yes 116184574 4054 31749717
chr1 116188628 116188636 FOXO3 JASPAR yes 116184574 4054 31749718
chr1 116188629 116188636 FOXD2 JASPAR yes 116184574 4055 31749719
chr1 116188629 116188636 FOXI1 JASPAR yes 116184574 4055 31749720
chr1 116188629 116188636 FOXL1 JASPAR yes 116184574 4055 31749721
chr1 116188629 116188636 FOXO4 JASPAR yes 116184574 4055 31749722
chr1 116188629 116188636 FOXO6 JASPAR yes 116184574 4055 31749723
chr1 116188629 116188636 FOXP3 JASPAR yes 116184574 4055 31749724
chr1 116188629 116188637 FOXO3 JASPAR yes 116184574 4055 31749725
chr1 116188632 116188650 IRF2 JASPAR yes 116184574 4058 31749726
chr1 116188634 116188649 SOX21 JASPAR yes 116184574 4060 31749727
chr1 116188638 116188642 NFE TRANSFAC yes 116184574 4064 31749728
chr1 116188640 116188654 POU1F1 JASPAR yes 116184574 4066 31749729
chr1 116188641 116188653 POU3F1 JASPAR yes 116184574 4067 31749730
chr1 116188641 116188653 POU3F2 JASPAR yes 116184574 4067 31749731
chr1 116188641 116188654 POU3F3 JASPAR yes 116184574 4067 31749732
chr1 116188642 116188646 YY1 TRANSFAC yes 116184574 4068 31749733
chr1 116188650 116188653 MYB TRANSFAC yes 116184574 4076 31749734
chr1 116188658 116188662 YY1 TRANSFAC yes 116184574 4084 31749735
chr1 116188659 116188667 FEV JASPAR yes 116184574 4085 31749736
chr1 116188661 116188666 ETS2 TRANSFAC yes 116184574 4087 31749737
chr1 116188677 116188685 FOXO3 JASPAR yes 116184574 4103 31749738
chr1 116188685 116188700 FOXP1 JASPAR yes 116184574 4111 31749739
chr1 116188686 116188697 FOXP2 JASPAR yes 116184574 4112 31749740
chr1 116188686 116188698 FOXC2 JASPAR yes 116184574 4112 31749741
chr1 116188688 116188696 FOXO3 JASPAR yes 116184574 4114 31749742
chr1 116188688 116188699 FOXA1 JASPAR yes 116184574 4114 31749743
chr1 116188715 116188726 BATF JASPAR yes 116184574 4141 31749744
chr1 116188756 116188766 EVX1 JASPAR yes 116184574 4182 31749745
chr1 116188768 116188772 YY1 TRANSFAC yes 116184574 4194 31749746
chr1 116188811 116188815 YY1 TRANSFAC yes 116184574 4237 31749747
chr1 116188822 116188829 SPI1 JASPAR yes 116184574 4248 31749748
chr1 116188846 116188855 NKX3-2 JASPAR yes 116184574 4272 31749749
chr1 116188870 116188874 NFE TRANSFAC yes 116184574 4296 31749750
chr1 116188870 116188875 GATA1 TRANSFAC yes 116184574 4296 31749751
chr1 116188870 116188876 GATA3 JASPAR yes 116184574 4296 31749752
chr1 116188877 116188886 SOX9 JASPAR yes 116184574 4303 31749753
chr1 116188877 116188892 FOXA1 JASPAR yes 116184574 4303 31749754
chr1 116188879 116188891 FOXC2 JASPAR yes 116184574 4305 31749755
chr1 116188880 116188888 FOXO3 JASPAR yes 116184574 4306 31749756
chr1 116188880 116188891 FOXC1 JASPAR yes 116184574 4306 31749757
chr1 116188881 116188892 FOXA1 JASPAR yes 116184574 4307 31749758
chr1 116188882 116188893 ESRRA JASPAR yes 116184574 4308 31749759
chr1 116188882 116188893 ESRRB JASPAR yes 116184574 4308 31749760
chr1 116188883 116188891 NR4A2 JASPAR yes 116184574 4309 31749761
chr1 116188933 116188937 YY1 TRANSFAC yes 116184574 4359 31749762
chr1 116188959 116188968 NFIX JASPAR yes 116184574 4385 31749763
chr1 116188959 116188969 NFIA JASPAR yes 116184574 4385 31749764
chr1 116188961 116188967 NFIC JASPAR yes 116184574 4387 31749765
chr1 116188966 116188977 FOXH1 JASPAR yes 116184574 4392 31749766
chr1 116188981 116189001 ESR1 JASPAR yes 116184574 4407 31749767
chr1 116188984 116188989 SP1 TRANSFAC yes 116184574 4410 31749768
chr1 116189014 116189018 LFA1 TRANSFAC yes 116184574 4440 31749769
chr1 116189066 116189081 HNF4A JASPAR yes 116184574 4492 31749770
chr1 116189067 116189081 RXRB JASPAR yes 116184574 4493 31749771
chr1 116189067 116189081 RXRG JASPAR yes 116184574 4493 31749772
chr1 116189067 116189082 HNF4G JASPAR yes 116184574 4493 31749773
chr1 116189067 116189082 NR2C2 JASPAR yes 116184574 4493 31749774
chr1 116189073 116189079 NFE2 TRANSFAC yes 116184574 4499 31749775
chr1 116189108 116189129 IRF1 JASPAR yes 116184574 4534 31749776
chr1 116189110 116189125 STAT2 JASPAR yes 116184574 4536 31749777
chr1 116189110 116189131 IRF1 JASPAR yes 116184574 4536 31749778
chr1 116189111 116189132 IRF1 JASPAR yes 116184574 4537 31749779
chr1 116189113 116189128 FOXP1 JASPAR yes 116184574 4539 31749780
chr1 116189114 116189129 FOXP1 JASPAR yes 116184574 4540 31749781
chr1 116189115 116189130 FOXP1 JASPAR yes 116184574 4541 31749782
chr1 116189116 116189131 FOXP1 JASPAR yes 116184574 4542 31749783
chr1 116189117 116189132 FOXP1 JASPAR yes 116184574 4543 31749784
chr1 116189118 116189133 FOXP1 JASPAR yes 116184574 4544 31749785
chr1 116189119 116189134 FOXP1 JASPAR yes 116184574 4545 31749786
chr1 116189120 116189135 FOXP1 JASPAR yes 116184574 4546 31749787
chr1 116189132 116189145 HSF1 JASPAR yes 116184574 4558 31749788
chr1 116189132 116189145 HSF4 JASPAR yes 116184574 4558 31749789
chr1 116189143 116189153 TBR1 JASPAR yes 116184574 4569 31749790
chr1 116189153 116189157 NFE TRANSFAC yes 116184574 4579 31749791
chr1 116189153 116189158 GATA1 TRANSFAC yes 116184574 4579 31749792
chr1 116189153 116189159 GATA3 JASPAR yes 116184574 4579 31749793
chr1 116189197 116189212 MEF2C JASPAR yes 116184574 4623 31749794
chr1 116189198 116189213 MEF2A JASPAR yes 116184574 4624 31749795
chr1 116189199 116189211 MEF2D JASPAR yes 116184574 4625 31749796
chr1 116189200 116189210 MEF2A JASPAR yes 116184574 4626 31749797
chr1 116189201 116189215 ONECUT2 JASPAR yes 116184574 4627 31749798
chr1 116189201 116189215 ONECUT3 JASPAR yes 116184574 4627 31749799
chr1 116189232 116189250 RARA JASPAR yes 116184574 4658 31749800
chr1 116189241 116189256 JUND JASPAR yes 116184574 4667 31749801
chr1 116189242 116189255 JUN JASPAR yes 116184574 4668 31749802
chr1 116189289 116189293 YY1 TRANSFAC yes 116184574 4715 31749803
chr1 116189300 116189316 ZNF143 JASPAR yes 116184574 4726 31749804
chr1 116189338 116189344 TCF4 TRANSFAC yes 116184574 4764 31749805
chr1 116189350 116189359 THAP1 JASPAR yes 116184574 4776 31749806
chr1 116189400 116189412 FOXI1 JASPAR yes 116184574 4826 31749807
chr1 116189409 116189420 DMRT3 JASPAR yes 116184574 4835 31749808
chr1 116189427 116189432 GATA2 JASPAR yes 116184574 4853 31749809
chr1 116189427 116189448 IRF1 JASPAR yes 116184574 4853 31749810
chr1 116189431 116189446 PRDM1 JASPAR yes 116184574 4857 31749811
chr1 116189433 116189443 GABPA JASPAR yes 116184574 4859 31749812
chr1 116189434 116189439 ETS2 TRANSFAC yes 116184574 4860 31749813
chr1 116189473 116189478 MYB TRANSFAC yes 116184574 4899 31749814
chr1 116189507 116189519 POU2F1 JASPAR yes 116184574 4933 31749815
chr1 116189507 116189520 POU3F3 JASPAR yes 116184574 4933 31749816
chr1 116189507 116189521 POU1F1 JASPAR yes 116184574 4933 31749817
chr1 116189508 116189520 POU3F1 JASPAR yes 116184574 4934 31749818
chr1 116189508 116189520 POU3F2 JASPAR yes 116184574 4934 31749819
chr1 116189509 116189513 YY1 TRANSFAC yes 116184574 4935 31749820
chr1 116189509 116189518 POU5F1B JASPAR yes 116184574 4935 31749821
chr1 116189509 116189520 PROP1 JASPAR yes 116184574 4935 31749822
chr1 116189513 116189529 SOX8 JASPAR yes 116184574 4939 31749823
chr1 116189532 116189542 TEAD1 JASPAR yes 116184574 4958 31749824
chr1 116189532 116189542 TEAD4 JASPAR yes 116184574 4958 31749825
chr1 116189537 116189547 NFIA JASPAR yes 116184574 4963 31749826
chr1 116189539 116189545 NFIC JASPAR yes 116184574 4965 31749827
chr1 116189549 116189566 RARA JASPAR yes 116184574 4975 31749828
chr1 116189550 116189554 LFA1 TRANSFAC yes 116184574 4976 31749829
chr1 116189562 116189570 FOXC1 JASPAR yes 116184574 4988 31749830
SNPs associated with VANGL1[ENSG00000173218.10], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 116174202 rs6699352 C T 10372 Esophagus 5.66515e-09 581968
chr1 116185296 rs12029798 T A 0 Pancreas 8.9813e-14 582043
chr1 116082270 rs1109658 C T 102304 Spleen 0.0312035 581622
chr1 116174985 rs4451544 G A 9589 Uterus 0.0266059 581983
chr1 116140078 rs61798990 T C 44496 Stomach 9.44842e-07 581840
chr1 116137772 rs11582522 C T 46802 Adrenal 0.00467078 581811
Details of VANGL1[ENSG00000173218.10]
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Genomic Location chr1:116184574-116240845[+]
TSS 116184574
Gene Name VANGL1
Ensembl ID ENSG00000173218.10
ENTREZID 81839
Uniprot
A0A024R0E3
Q8TAA9
Protein Name
HCG1747659
Vang-like protein
Vang-like protein 1
Expression levels of VANGL1[ENSG00000173218.10]
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