EnhancerDB
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Enhancers that regulate HOXB4[ENSG00000182742.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 46553725 46585590 enh4456 46657473 71883
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1)
chr17 46569094 46569227 vista25027 46657473 88246
VISTA
chr17 46583139 46583523 vista25028 46657473 73950
VISTA
chr17 46586283 46601895 enh17197 46657473 55578
Bone Marrow (K562) Prostate (PC-3) Large Intestine Esophagus Bone (Osteoblast) Blood (GM12878) Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
chr17 46605931 46606242 vista25029 46657473 51231
VISTA
chr17 46642274 46642589 vista25030 46657473 14884
VISTA
chr17 46643791 46644035 vista25031 46657473 13438
VISTA
chr17 46644443 46644754 vista25032 46657473 12719
VISTA
chr17 46647653 46647800 vista25033 46657473 9673
VISTA
chr17 46648538 46649382 vista25034 46657473 8091
VISTA
chr17 46654606 46654947 vista25035 46657473 2526
VISTA
chr17 46660825 46667135 enh99425 46657473 3352
Uterus
chr17 46662223 46662405 vista25036 46657473 4750
VISTA
chr17 46662684 46663231 vista25037 46657473 5211
VISTA
chr17 46664992 46665342 vista25038 46657473 7519
VISTA
chr17 46680378 46680812 vista25039 46657473 22905
VISTA
chr17 46682250 46682768 vista700 46657473 24777
VISTA
chr17 46696942 46697254 vista25040 46657473 39469
VISTA
chr17 46702579 46702749 vista25041 46657473 45106
VISTA
chr17 46708678 46709096 vista25042 46657473 51205
VISTA
chr17 46745530 46751295 enh57708 46657473 88057
Pancreas Pancreas (Panc1) Lung (A549)
chr17 46752305 46761275 enh57709 46657473 94832
Prostate (PC-3) Brain (SK-N-MC) Ovary Lung (A549) Muscle (A673)
Transcript facotrs that regulate HOXB4[ENSG00000182742.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 46653095 46656877 POLR2A UCSC Txn Factor no Conserved 46657473 596 108268340
chr17 46653977 46655422 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 46657473 2051 108268341
chr17 46653990 46655422 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 46657473 2051 108268342
chr17 46654122 46654634 E2F1 UCSC Txn Factor no Conserved 46657473 2839 108268343
chr17 46654122 46654634 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 46657473 2839 108268344
chr17 46654154 46654754 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 46657473 2719 108268345
chr17 46654247 46655037 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 46657473 2436 108268346
chr17 46654555 46655059 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 46657473 2414 108268347
chr17 46654605 46654788 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 46657473 2685 108268348
chr17 46654607 46654612 SP1 TRANSFAC yes 46657473 2861 21250690
chr17 46654608 46654622 PLAG1 JASPAR yes 46657473 2851 21250691
chr17 46654609 46654614 TFAP2A TRANSFAC yes 46657473 2859 21250692
chr17 46654609 46654615 MZF1 JASPAR yes 46657473 2858 21250693
chr17 46654609 46654630 ZNF263 JASPAR yes 46657473 2843 21250694
chr17 46654610 46654620 SP1 JASPAR yes 46657473 2853 21250695
chr17 46654610 46654631 ZNF263 JASPAR yes 46657473 2842 21250696
chr17 46654611 46654616 ETS2 TRANSFAC yes 46657473 2857 21250697
chr17 46654628 46654639 NFKB1 JASPAR yes 46657473 2834 21250698
chr17 46654643 46654653 HOXD13 JASPAR yes 46657473 2820 21250699
chr17 46654643 46654654 HOXA10 JASPAR yes 46657473 2819 21250700
chr17 46654644 46654654 GBX2 JASPAR yes 46657473 2819 21250701
chr17 46654644 46654654 GSX2 JASPAR yes 46657473 2819 21250702
chr17 46654644 46654654 HOXB3 JASPAR yes 46657473 2819 21250703
chr17 46654644 46654654 MNX1 JASPAR yes 46657473 2819 21250704
chr17 46654644 46654654 RAX JASPAR yes 46657473 2819 21250705
chr17 46654645 46654653 BARX1 JASPAR yes 46657473 2820 21250706
chr17 46654645 46654653 BSX JASPAR yes 46657473 2820 21250707
chr17 46654645 46654653 ISL2 JASPAR yes 46657473 2820 21250708
chr17 46654645 46654653 LMX1B JASPAR yes 46657473 2820 21250709
chr17 46654645 46654653 MSX1 JASPAR yes 46657473 2820 21250710
chr17 46654645 46654653 MSX2 JASPAR yes 46657473 2820 21250711
chr17 46654645 46654654 VENTX JASPAR yes 46657473 2819 21250712
chr17 46654659 46654669 MZF1 JASPAR yes 46657473 2804 21250713
chr17 46654673 46654678 SP1 TRANSFAC yes 46657473 2795 21250714
chr17 46654674 46654688 GLIS3 JASPAR yes 46657473 2785 21250715
chr17 46654688 46654709 ZNF263 JASPAR yes 46657473 2764 21250716
chr17 46654689 46654706 ZNF410 JASPAR yes 46657473 2767 21250717
chr17 46654691 46654712 ZNF263 JASPAR yes 46657473 2761 21250718
chr17 46654694 46654715 ZNF263 JASPAR yes 46657473 2758 21250719
chr17 46654695 46654705 ZNF740 JASPAR yes 46657473 2768 21250720
chr17 46654697 46654718 ZNF263 JASPAR yes 46657473 2755 21250721
chr17 46654699 46654713 PLAG1 JASPAR yes 46657473 2760 21250722
chr17 46654700 46654721 ZNF263 JASPAR yes 46657473 2752 21250723
chr17 46654703 46654724 ZNF263 JASPAR yes 46657473 2749 21250724
chr17 46654705 46654716 E2F6 JASPAR yes 46657473 2757 21250725
chr17 46654707 46654715 SP1 TRANSFAC yes 46657473 2758 21250726
chr17 46654707 46654717 SP1 JASPAR yes 46657473 2756 21250727
chr17 46654709 46654715 MAZ TRANSFAC yes 46657473 2758 21250728
chr17 46654715 46654726 NFKB1 JASPAR yes 46657473 2747 21250729
chr17 46654733 46654740 SPIB JASPAR yes 46657473 2733 21250730
chr17 46654733 46655203 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 46657473 2270 108268349
chr17 46654736 46654751 FOXP1 JASPAR yes 46657473 2722 21250731
chr17 46654766 46654777 STAT3 JASPAR yes 46657473 2696 21250732
chr17 46654777 46654796 CTCF JASPAR yes 46657473 2677 21250733
chr17 46654778 46655178 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 46657473 2295 108268350
chr17 46654780 46654790 MZF1 JASPAR yes 46657473 2683 21250734
chr17 46654798 46654812 MTF1 JASPAR yes 46657473 2661 21250735
chr17 46654802 46655236 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 46657473 2237 108268351
chr17 46654802 46655242 TCF7L2 UCSC Txn Factor no Conserved 46657473 2231 108268352
chr17 46654818 46654831 SMAD2 JASPAR yes 46657473 2642 21250736
chr17 46654836 46654841 ETS2 TRANSFAC yes 46657473 2632 21250737
chr17 46654840 46654854 ONECUT2 JASPAR yes 46657473 2619 21250738
chr17 46654840 46654854 ONECUT3 JASPAR yes 46657473 2619 21250739
chr17 46654842 46654853 FOXC1 JASPAR yes 46657473 2620 21250740
chr17 46654842 46654854 FOXC2 JASPAR yes 46657473 2619 21250741
chr17 46654856 46654867 BATF JASPAR yes 46657473 2606 21250742
chr17 46654860 46654871 BATF JASPAR yes 46657473 2602 21250743
chr17 46654886 46654907 ZNF263 JASPAR yes 46657473 2566 21250744
chr17 46654889 46654910 ZNF263 JASPAR yes 46657473 2563 21250745
chr17 46654891 46654901 SP1 JASPAR yes 46657473 2572 21250746
chr17 46654892 46654913 ZNF263 JASPAR yes 46657473 2560 21250747
chr17 46654895 46654916 ZNF263 JASPAR yes 46657473 2557 21250748
chr17 46654898 46654919 ZNF263 JASPAR yes 46657473 2554 21250749
chr17 46654901 46654922 ZNF263 JASPAR yes 46657473 2551 21250750
chr17 46654903 46654913 SP1 JASPAR yes 46657473 2560 21250751
chr17 46654904 46654925 ZNF263 JASPAR yes 46657473 2548 21250752
chr17 46654907 46654928 ZNF263 JASPAR yes 46657473 2545 21250753
chr17 46654912 46654933 ZNF263 JASPAR yes 46657473 2540 21250754
chr17 46654920 46654940 RREB1 JASPAR yes 46657473 2533 21250755
chr17 46654923 46654929 SP1 TRANSFAC yes 46657473 2544 21250756
chr17 46654923 46654933 SP1 JASPAR yes 46657473 2540 21250757
chr17 46654927 46654933 MZF1 JASPAR yes 46657473 2540 21250758
chr17 46654941 46655048 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 46657473 2425 108268353
chr17 46662252 46662263 TBX20 JASPAR yes 46657473 4779 21250759
chr17 46662252 46662263 TBX20 JASPAR yes 46657473 4779 54594234
chr17 46662255 46662416 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 46657473 4782 108268354
chr17 46662260 46662836 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 46657473 4787 108268355
chr17 46662260 46662836 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 46657473 4787 108268356
chr17 46662267 46662277 SP1 TRANSFAC yes 46657473 4794 21250760
chr17 46662267 46662277 SP1 TRANSFAC yes 46657473 4794 54594235
chr17 46662267 46662288 ZNF263 JASPAR yes 46657473 4794 21250761
chr17 46662267 46662288 ZNF263 JASPAR yes 46657473 4794 54594236
chr17 46662268 46662278 SP1 JASPAR yes 46657473 4795 21250762
chr17 46662268 46662278 SP1 JASPAR yes 46657473 4795 54594237
chr17 46662269 46662275 SP1 TRANSFAC yes 46657473 4796 21250763
chr17 46662269 46662275 SP1 TRANSFAC yes 46657473 4796 54594238
chr17 46662269 46662279 SP1 JASPAR yes 46657473 4796 21250764
chr17 46662269 46662279 SP1 JASPAR yes 46657473 4796 54594239
chr17 46662270 46662290 RREB1 JASPAR yes 46657473 4797 21250765
chr17 46662270 46662290 RREB1 JASPAR yes 46657473 4797 54594240
chr17 46662271 46662281 ZNF740 JASPAR yes 46657473 4798 21250766
chr17 46662271 46662281 ZNF740 JASPAR yes 46657473 4798 54594241
chr17 46662273 46662287 PLAG1 JASPAR yes 46657473 4800 21250767
chr17 46662273 46662287 PLAG1 JASPAR yes 46657473 4800 54594242
chr17 46662273 46662293 RREB1 JASPAR yes 46657473 4800 21250768
chr17 46662273 46662293 RREB1 JASPAR yes 46657473 4800 54594243
chr17 46662273 46662929 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 46657473 4800 108268357
chr17 46662273 46662929 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 46657473 4800 108268358
chr17 46662274 46662294 RREB1 JASPAR yes 46657473 4801 21250769
chr17 46662274 46662294 RREB1 JASPAR yes 46657473 4801 54594244
chr17 46662278 46662298 RREB1 JASPAR yes 46657473 4805 21250770
chr17 46662278 46662298 RREB1 JASPAR yes 46657473 4805 54594245
chr17 46662280 46662285 SP1 TRANSFAC yes 46657473 4807 21250771
chr17 46662280 46662285 SP1 TRANSFAC yes 46657473 4807 54594246
chr17 46662280 46662286 SP1 TRANSFAC yes 46657473 4807 21250772
chr17 46662280 46662286 SP1 TRANSFAC yes 46657473 4807 54594247
chr17 46662282 46662291 SP1 TRANSFAC yes 46657473 4809 21250773
chr17 46662282 46662291 SP1 TRANSFAC yes 46657473 4809 54594248
chr17 46662283 46662303 RREB1 JASPAR yes 46657473 4810 21250774
chr17 46662283 46662303 RREB1 JASPAR yes 46657473 4810 54594249
chr17 46662287 46662295 SP1 TRANSFAC yes 46657473 4814 21250775
chr17 46662287 46662295 SP1 TRANSFAC yes 46657473 4814 54594250
chr17 46662287 46662297 SP1 JASPAR yes 46657473 4814 21250776
chr17 46662287 46662297 SP1 JASPAR yes 46657473 4814 54594251
chr17 46662288 46662294 SP1 TRANSFAC yes 46657473 4815 21250777
chr17 46662288 46662294 SP1 TRANSFAC yes 46657473 4815 54594252
chr17 46662288 46662298 SP1 JASPAR yes 46657473 4815 21250778
chr17 46662288 46662298 SP1 JASPAR yes 46657473 4815 54594253
chr17 46662289 46662296 SP1 TRANSFAC yes 46657473 4816 21250779
chr17 46662289 46662296 SP1 TRANSFAC yes 46657473 4816 54594254
chr17 46662290 46662295 SP1 TRANSFAC yes 46657473 4817 21250780
chr17 46662290 46662295 SP1 TRANSFAC yes 46657473 4817 54594255
chr17 46662290 46662296 SP1 TRANSFAC yes 46657473 4817 21250781
chr17 46662290 46662296 SP1 TRANSFAC yes 46657473 4817 54594256
chr17 46662290 46662297 SP1 TRANSFAC yes 46657473 4817 21250782
chr17 46662290 46662297 SP1 TRANSFAC yes 46657473 4817 54594257
chr17 46662291 46662299 WT1 TRANSFAC yes 46657473 4818 21250783
chr17 46662291 46662299 WT1 TRANSFAC yes 46657473 4818 54594258
chr17 46662294 46662300 SP1 TRANSFAC yes 46657473 4821 21250784
chr17 46662294 46662300 SP1 TRANSFAC yes 46657473 4821 54594259
chr17 46662324 46662338 PAX6 JASPAR yes 46657473 4851 21250785
chr17 46662324 46662338 PAX6 JASPAR yes 46657473 4851 54594260
chr17 46662334 46662352 RARA JASPAR yes 46657473 4861 21250786
chr17 46662334 46662352 RARA JASPAR yes 46657473 4861 54594261
chr17 46662341 46662354 NR2F1 JASPAR yes 46657473 4868 21250787
chr17 46662341 46662354 NR2F1 JASPAR yes 46657473 4868 54594262
chr17 46662345 46662359 RXRB JASPAR yes 46657473 4872 21250788
chr17 46662345 46662359 RXRG JASPAR yes 46657473 4872 21250789
chr17 46662345 46662359 RXRB JASPAR yes 46657473 4872 54594263
chr17 46662345 46662359 RXRG JASPAR yes 46657473 4872 54594264
chr17 46662345 46662360 NR2C2 JASPAR yes 46657473 4872 21250790
chr17 46662345 46662360 NR2C2 JASPAR yes 46657473 4872 54594265
chr17 46662363 46662375 TFAP2A JASPAR yes 46657473 4890 21250791
chr17 46662363 46662375 TFAP2A JASPAR yes 46657473 4890 54594266
chr17 46662364 46662370 SP1 TRANSFAC yes 46657473 4891 21250792
chr17 46662364 46662370 SP1 TRANSFAC yes 46657473 4891 54594267
chr17 46662364 46662375 TFAP2A JASPAR yes 46657473 4891 21250793
chr17 46662364 46662375 TFAP2B JASPAR yes 46657473 4891 21250794
chr17 46662364 46662375 TFAP2A JASPAR yes 46657473 4891 54594268
chr17 46662364 46662375 TFAP2B JASPAR yes 46657473 4891 54594269
chr17 46662376 46662379 MYB TRANSFAC yes 46657473 4903 21250795
chr17 46662376 46662379 MYB TRANSFAC yes 46657473 4903 54594270
SNPs associated with HOXB4[ENSG00000182742.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 46766296 rs117725224 C T 108823 Esophagus 0.174395 4911577
chr17 46033854 rs4793732 C A,T 619021 Esophagus 0.203593 4906925
chr17 46622373 rs111401880 C A,G 30502 Pancreas 0.0283477 4910607
chr17 45943546 rs8070815 T A 709329 Breast 0.312375 4906260
chr17 47264539 rs78874864 C T 607066 Spleen 0.302098 4914339
chr17 47511103 rs114102557 C T 853630 Uterus 0.42698 4915735
chr17 46661572 rs2288280 C T 4099 Thyroid 0.209373 4910820
chr17 47320938 rs12950511 C T 663465 Liver 0.451234 4914819
chr17 46335409 rs28613168 G A,C 317466 Lung 0.0101896 4908897
chr17 46661549 rs142395873 C T 4076 Stomach 0.105157 4910819
Details of HOXB4[ENSG00000182742.5]
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Genomic Location chr17:46652875-46657473[-]
TSS 46657473
Gene Name HOXB4
Ensembl ID ENSG00000182742.5
ENTREZID 3214
Uniprot
P17483
Protein Name
Homeobox protein Hox-B4
Expression levels of HOXB4[ENSG00000182742.5]
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