EnhancerDB
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Enhancers that regulate CSF1[ENSG00000184371.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 110342405 110353419 enh43017 110452864 99445
Prostate (RWPE1) Blood (T-cell) Esophagus Bone (Osteoblast) Muscle (A673) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Stomach
chr1 110355145 110372339 enh12127 110452864 80525
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Breast Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Uterus Heart
chr1 110355223 110355262 vista2871 110452864 97602
VISTA
chr1 110358971 110359415 vista2872 110452864 93449
VISTA
chr1 110360957 110361372 vista2873 110452864 91492
VISTA
chr1 110363861 110364229 vista2874 110452864 88635
VISTA
chr1 110364881 110365302 vista2875 110452864 87562
VISTA
chr1 110366477 110366702 vista2876 110452864 86162
VISTA
chr1 110378865 110384215 enh79181 110452864 68649
Prostate (PC-3) Cervix (HeLa-S3)
chr1 110386905 110400955 enh49937 110452864 51909
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Stomach Thyroid Lung (PC-9) Heart
chr1 110404865 110410175 enh12128 110452864 42689
Bone Marrow (K562) Large Intestine Placenta Spleen Uterus Stomach
chr1 110406868 110407271 vista2877 110452864 45593
VISTA
chr1 110412890 110446635 enh12129 110452864 6229
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr1 110418068 110418377 vista2878 110452864 34487
VISTA
chr1 110420039 110420145 vista2879 110452864 32719
VISTA
chr1 110429456 110429734 vista2880 110452864 23130
VISTA
chr1 110435112 110435421 vista2881 110452864 17443
VISTA
chr1 110438276 110438910 vista2882 110452864 13954
VISTA
chr1 110439976 110440401 vista2883 110452864 12463
VISTA
chr1 110443259 110443410 vista2884 110452864 9454
VISTA
chr1 110444415 110444738 vista2885 110452864 8126
VISTA
chr1 110447199 110447636 vista2886 110452864 5228
VISTA
chr1 110448900 110449220 vista2887 110452864 3644
VISTA
chr1 110451717 110451917 vista2888 110452864 947
VISTA
chr1 110454846 110455290 vista2889 110452864 1982
VISTA
chr1 110471785 110480315 enh27064 110452864 18921
Liver (HepG2) Large Intestine Liver Astrocyte Muscle (Myoblast) Pancreas Muscle (Myotube) Stomach
chr1 110476602 110476703 vista2890 110452864 23738
VISTA
chr1 110483145 110493195 enh49938 110452864 30281
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Pancreas Neural Stem Cells (H9) Stomach
chr1 110494965 110506335 enh12130 110452864 42101
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Ovary Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Placenta Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
chr1 110502633 110502891 vista2891 110452864 49769
VISTA
chr1 110510105 110514255 enh79182 110452864 57241
Prostate (PC-3) Lung (PC-9)
chr1 110516359 110521267 enh12131 110452864 63495
Cervix (HeLa-S3) Prostate (RWPE1) Bone (Osteoblast) Placenta Lung (PC-9) Muscle (Myoblast)
chr1 110529085 110542735 enh552 110452864 76221
Prostate (PC-3) Liver (HepG2) Esophagus Astrocyte Placenta Thyroid Blood (Karpas-422) Lung (PC-9) Stomach
chr1 110537379 110537528 vista2892 110452864 84515
VISTA
chr1 110544605 110548755 enh109343 110452864 91741
Stomach
chr1 110548379 110548612 vista2893 110452864 95515
VISTA
Transcript facotrs that regulate CSF1[ENSG00000184371.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 110448500 110449144 ZNF274 GTRD no Bone Marrow (K562) 110452864 3720 107820682
chr1 110448698 110449078 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 110452864 3786 107820683
chr1 110448716 110449312 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 110452864 3552 107820684
chr1 110448720 110449156 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 110452864 3708 107820685
chr1 110448721 110449241 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 110452864 3623 107820686
chr1 110448739 110449059 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 110452864 3805 107820687
chr1 110448759 110449069 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 110452864 3795 107820688
chr1 110448763 110449283 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 110452864 3581 107820689
chr1 110448765 110449361 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 110452864 3503 107820690
chr1 110448776 110449040 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 110452864 3824 107820691
chr1 110448794 110449174 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 110452864 3690 107820692
chr1 110448795 110449125 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 110452864 3739 107820693
chr1 110448800 110449164 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 110452864 3700 107820694
chr1 110448811 110449195 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 110452864 3669 107820695
chr1 110448824 110449135 SPI1 UCSC Txn Factor no Conserved 110452864 3729 107820696
chr1 110448824 110449135 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 110452864 3729 107820697
chr1 110448830 110449200 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 110452864 3664 107820698
chr1 110448852 110449096 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 110452864 3768 107820699
chr1 110448864 110449140 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 110452864 3724 107820700
chr1 110448866 110449142 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 110452864 3722 107820701
chr1 110448880 110449036 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 110452864 3828 107820702
chr1 110448908 110448924 SOX8 JASPAR yes 110452864 3940 118348611
chr1 110448913 110449253 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 110452864 3611 107820703
chr1 110448916 110448925 SOX9 JASPAR yes 110452864 3939 118348612
chr1 110448924 110449251 ZNF274 GTRD no Bone Marrow (K562) 110452864 3613 107820704
chr1 110448952 110448973 IRF1 JASPAR yes 110452864 3891 118348613
chr1 110448954 110448965 ELK4 JASPAR yes 110452864 3899 118348614
chr1 110448954 110448965 FLI1 JASPAR yes 110452864 3899 118348615
chr1 110448954 110448967 ELF3 JASPAR yes 110452864 3897 118348616
chr1 110448954 110448969 STAT2 JASPAR yes 110452864 3895 118348617
chr1 110448955 110448965 ELK1 JASPAR yes 110452864 3899 118348618
chr1 110448955 110448965 ELK3 JASPAR yes 110452864 3899 118348619
chr1 110448955 110448965 ERF JASPAR yes 110452864 3899 118348620
chr1 110448955 110448965 ERG JASPAR yes 110452864 3899 118348621
chr1 110448955 110448965 ETS1 JASPAR yes 110452864 3899 118348622
chr1 110448955 110448965 ETV1 JASPAR yes 110452864 3899 118348623
chr1 110448955 110448965 ETV3 JASPAR yes 110452864 3899 118348624
chr1 110448955 110448965 ETV4 JASPAR yes 110452864 3899 118348625
chr1 110448955 110448965 ETV6 JASPAR yes 110452864 3899 118348626
chr1 110448955 110448965 FEV JASPAR yes 110452864 3899 118348627
chr1 110448955 110448965 FLI1 JASPAR yes 110452864 3899 118348628
chr1 110448955 110448965 GABPA JASPAR yes 110452864 3899 118348629
chr1 110448955 110448966 ELF5 JASPAR yes 110452864 3898 118348630
chr1 110448955 110448966 ETV2 JASPAR yes 110452864 3898 118348631
chr1 110448955 110448966 SPDEF JASPAR yes 110452864 3898 118348632
chr1 110448955 110448967 EHF JASPAR yes 110452864 3897 118348633
chr1 110448955 110448967 ELF1 JASPAR yes 110452864 3897 118348634
chr1 110448955 110448967 ELF4 JASPAR yes 110452864 3897 118348635
chr1 110448955 110448968 ELF1 JASPAR yes 110452864 3896 118348636
chr1 110448955 110448969 SPI1 JASPAR yes 110452864 3895 118348637
chr1 110448955 110448969 SPIC JASPAR yes 110452864 3895 118348638
chr1 110448956 110448963 SPI1 JASPAR yes 110452864 3901 118348639
chr1 110448956 110448964 EHF JASPAR yes 110452864 3900 118348640
chr1 110448956 110448964 FEV JASPAR yes 110452864 3900 118348641
chr1 110448956 110448970 IRF8 JASPAR yes 110452864 3894 118348642
chr1 110448964 110448979 HSF1 JASPAR yes 110452864 3885 118348643
chr1 110449012 110449017 GATA2 JASPAR yes 110452864 3847 118348644
chr1 110449014 110449024 ERF JASPAR yes 110452864 3840 118348645
chr1 110449016 110449023 SPI1 JASPAR yes 110452864 3841 118348646
chr1 110449036 110449130 ZNF274 GTRD no Liver (HepG2) 110452864 3734 107820705
chr1 110449045 110449055 TFAP4 JASPAR yes 110452864 3809 118348647
chr1 110449049 110449063 XBP1 JASPAR yes 110452864 3801 118348648
chr1 110449050 110449064 CREB3 JASPAR yes 110452864 3800 118348649
chr1 110449050 110449064 CREB3L1 JASPAR yes 110452864 3800 118348650
chr1 110449078 110449088 NFATC3 JASPAR yes 110452864 3776 118348651
chr1 110449080 110449086 ETS1 JASPAR yes 110452864 3778 118348652
chr1 110449105 110449120 HSF1 JASPAR yes 110452864 3744 118348653
chr1 110449106 110449119 HSF2 JASPAR yes 110452864 3745 118348654
chr1 110449106 110449119 HSF4 JASPAR yes 110452864 3745 118348655
chr1 110449115 110449119 H4TF2 TRANSFAC yes 110452864 3745 118348656
chr1 110449118 110449130 NHLH1 JASPAR yes 110452864 3734 118348657
chr1 110449119 110449129 TFAP4 JASPAR yes 110452864 3735 118348658
chr1 110449145 110449163 RARA JASPAR yes 110452864 3701 118348659
chr1 110449155 110449159 LFA1 TRANSFAC yes 110452864 3705 118348660
chr1 110449163 110449168 ETS2 TRANSFAC yes 110452864 3696 118348661
chr1 110449166 110449182 ZNF143 JASPAR yes 110452864 3682 118348662
chr1 110449181 110449187 ZNF354C JASPAR yes 110452864 3677 118348663
chr1 110449183 110449188 GATA2 JASPAR yes 110452864 3676 118348664
chr1 110451741 110451751 SP1 JASPAR yes 110452864 1113 118348665
chr1 110451756 110451761 ETS2 TRANSFAC yes 110452864 1103 118348666
chr1 110451756 110451764 EHF JASPAR yes 110452864 1100 118348667
chr1 110451786 110451799 SCRT2 JASPAR yes 110452864 1065 118348668
chr1 110451786 110451801 SCRT1 JASPAR yes 110452864 1063 118348669
chr1 110451803 110451811 GATA3 JASPAR yes 110452864 1053 118348670
chr1 110451819 110451830 FLI1 JASPAR yes 110452864 1034 118348671
chr1 110451820 110451830 ETV6 JASPAR yes 110452864 1034 118348672
chr1 110451820 110451831 ELF5 JASPAR yes 110452864 1033 118348673
chr1 110451820 110451833 ELF1 JASPAR yes 110452864 1031 118348674
chr1 110451820 110451834 SPI1 JASPAR yes 110452864 1030 118348675
chr1 110451821 110451828 SPI1 JASPAR yes 110452864 1036 118348676
chr1 110451821 110451829 EHF JASPAR yes 110452864 1035 118348677
chr1 110451823 110451830 SPIB JASPAR yes 110452864 1034 118348678
chr1 110451829 110451832 MYB TRANSFAC yes 110452864 1032 118348679
chr1 110451862 110451876 GATA2 JASPAR yes 110452864 988 118348680
chr1 110451866 110451874 GATA5 JASPAR yes 110452864 990 118348681
chr1 110451879 110451883 YY1 TRANSFAC yes 110452864 981 118348682
chr1 110451892 110451908 SOX4 JASPAR yes 110452864 956 118348683
chr1 110451893 110451908 SOX21 JASPAR yes 110452864 956 118348684
chr1 110451893 110451909 SOX4 JASPAR yes 110452864 955 118348685
chr1 110451909 110451914 GATA2 JASPAR yes 110452864 950 118348686
chr1 110454629 110455942 ZNF274 GTRD no Bone Marrow (K562) 110452864 1765 107820706
chr1 110454847 110454861 SPIC JASPAR yes 110452864 1983 118348687
chr1 110454852 110454863 NFKB1 JASPAR yes 110452864 1988 118348688
chr1 110454853 110454858 ETS2 TRANSFAC yes 110452864 1989 118348689
chr1 110454853 110454863 RELA JASPAR yes 110452864 1989 118348690
chr1 110454855 110454870 HNF4G JASPAR yes 110452864 1991 118348691
chr1 110454856 110454870 NR2F1 JASPAR yes 110452864 1992 118348692
chr1 110454856 110454871 HNF4A JASPAR yes 110452864 1992 118348693
chr1 110454883 110454894 EBF1 JASPAR yes 110452864 2019 118348694
chr1 110454887 110455923 ZNF274 GTRD no Cervix (HeLa-S3) 110452864 2023 107820707
chr1 110454890 110455872 ZNF143 GTRD no Epithelial (MCF-7) 110452864 2026 107820708
chr1 110454896 110455844 ZBTB33 GTRD no Lung (A549) 110452864 2032 107820709
chr1 110454897 110454918 ZNF263 JASPAR yes 110452864 2033 118348695
chr1 110454900 110454910 MZF1 JASPAR yes 110452864 2036 118348696
chr1 110454903 110454924 ZNF263 JASPAR yes 110452864 2039 118348697
chr1 110454905 110454910 ETS2 TRANSFAC yes 110452864 2041 118348698
chr1 110454905 110455902 ZNF143 GTRD no Epithelial (MCF-7) 110452864 2041 107820710
chr1 110454906 110454927 ZNF263 JASPAR yes 110452864 2042 118348699
chr1 110454924 110454929 GATA2 JASPAR yes 110452864 2060 118348700
chr1 110454952 110455845 ZNF274 GTRD no Bone Marrow (K562) 110452864 2088 107820711
chr1 110454983 110455831 ZBTB33 GTRD no Lung (A549) 110452864 2119 107820712
chr1 110454992 110455644 ZNF274 GTRD no Bone Marrow (K562) 110452864 2128 107820713
chr1 110454993 110454998 ETS2 TRANSFAC yes 110452864 2129 118348701
chr1 110454994 110455770 ZNF274 GTRD no Bone Marrow (K562) 110452864 2130 107820714
chr1 110455010 110455016 MZF1 JASPAR yes 110452864 2146 118348702
chr1 110455016 110455747 ZNF274 GTRD no Bone Marrow (K562) 110452864 2152 107820715
chr1 110455034 110455045 E2F6 JASPAR yes 110452864 2170 118348703
chr1 110455035 110455040 SP1 TRANSFAC yes 110452864 2171 118348704
chr1 110455039 110455045 PEA3 TRANSFAC yes 110452864 2175 118348705
chr1 110455039 110455491 ZNF274 GTRD no Liver (HepG2) 110452864 2175 107820716
chr1 110455042 110455063 ZNF263 JASPAR yes 110452864 2178 118348706
chr1 110455048 110455575 ZNF274 GTRD no Liver (HepG2) 110452864 2184 107820717
chr1 110455061 110455072 NRF1 JASPAR yes 110452864 2197 118348707
chr1 110455069 110455591 ZNF274 GTRD no Bone Marrow (K562) 110452864 2205 107820718
chr1 110455076 110455605 ZBTB33 GTRD no Lung (A549) 110452864 2212 107820719
chr1 110455093 110455096 MYB TRANSFAC yes 110452864 2229 118348708
chr1 110455094 110455104 ZNF740 JASPAR yes 110452864 2230 118348709
chr1 110455094 110455108 GLIS2 JASPAR yes 110452864 2230 118348710
chr1 110455094 110455108 GLIS3 JASPAR yes 110452864 2230 118348711
chr1 110455094 110455108 ZIC1 JASPAR yes 110452864 2230 118348712
chr1 110455094 110455109 ZIC3 JASPAR yes 110452864 2230 118348713
chr1 110455094 110455109 ZIC4 JASPAR yes 110452864 2230 118348714
chr1 110455095 110455725 ZNF274 GTRD no Bone Marrow (K562) 110452864 2231 107820720
chr1 110455103 110455107 NFE TRANSFAC yes 110452864 2239 118348715
chr1 110455107 110455111 NFE TRANSFAC yes 110452864 2243 118348716
chr1 110455127 110455139 YY1 JASPAR yes 110452864 2263 118348717
chr1 110455133 110455548 ZNF274 GTRD no Bone Marrow (K562) 110452864 2269 107820721
chr1 110455133 110455646 ZNF274 GTRD no Bone Marrow (K562) 110452864 2269 107820722
chr1 110455143 110455147 H4TF2 TRANSFAC yes 110452864 2279 118348718
chr1 110455148 110455161 NFKB1 JASPAR yes 110452864 2284 118348719
chr1 110455148 110455161 NFKB2 JASPAR yes 110452864 2284 118348720
chr1 110455149 110455159 NFKB1 JASPAR yes 110452864 2285 118348721
chr1 110455151 110455570 ZNF274 GTRD no Blood (GM12878) 110452864 2287 107820723
chr1 110455153 110455158 GATA2 JASPAR yes 110452864 2289 118348722
chr1 110455154 110455579 ZNF274 GTRD no Bone Marrow (K562) 110452864 2290 107820724
chr1 110455155 110455169 PLAG1 JASPAR yes 110452864 2291 118348723
chr1 110455163 110455596 ZNF274 GTRD no Liver (HepG2) 110452864 2299 107820725
chr1 110455169 110455629 ZNF274 GTRD no Cervix (HeLa-S3) 110452864 2305 107820726
chr1 110455173 110455559 ZBTB33 GTRD no Lung (A549) 110452864 2309 107820727
chr1 110455188 110455593 ZNF274 GTRD no Bone Marrow (K562) 110452864 2324 107820728
chr1 110455193 110455361 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 110452864 2329 107820729
chr1 110455197 110455607 ZNF274 GTRD no Liver (HepG2) 110452864 2333 107820730
chr1 110455204 110455210 MZF1 JASPAR yes 110452864 2340 118348724
chr1 110455216 110455586 ZNF274 GTRD no Bone Marrow (K562) 110452864 2352 107820731
chr1 110455221 110455234 DUXA JASPAR yes 110452864 2357 118348725
chr1 110455222 110455233 DUX4 JASPAR yes 110452864 2358 118348726
chr1 110455222 110455541 ZNF274 GTRD no Blood (GM12878) 110452864 2358 107820732
chr1 110455225 110455239 TCF7L2 JASPAR yes 110452864 2361 118348727
chr1 110455233 110455253 ESR1 JASPAR yes 110452864 2369 118348728
chr1 110455236 110455507 ZNF274 GTRD no Bone Marrow (K562) 110452864 2372 107820733
chr1 110455236 110455712 ZNF274 GTRD no Blood (GM12878) 110452864 2372 107820734
chr1 110455262 110455283 ZNF263 JASPAR yes 110452864 2398 118348729
chr1 110455264 110455272 TBX15 JASPAR yes 110452864 2400 118348730
chr1 110455265 110455494 ZNF274 GTRD no Blood (GM12878) 110452864 2401 107820735
chr1 110455267 110455632 ZNF274 GTRD no Cervix (HeLa-S3) 110452864 2403 107820736
chr1 110455274 110455289 TFAP2C JASPAR yes 110452864 2410 118348731
chr1 110455277 110455288 EBF1 JASPAR yes 110452864 2413 118348732
SNPs associated with CSF1[ENSG00000184371.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 110503296 rs17610659 T C 29682 Esophagus 0.0100062 550018
chr1 110470764 rs333947 G A 0 Esophagus 0.00062625 549625
chr1 110455305 rs333952 G A 0 Esophagus 0.115481 549600
chr1 109922377 rs1149175 G A 530487 Heart 0.333828 546317
chr1 111361461 rs115625948 T C 887847 Heart 0.311945 555489
chr1 110427389 rs75424121 C T 25475 Pancreas 0.374955 549284
chr1 110470764 rs333947 G A 0 Breast 0.0838768 549625
chr1 110677023 rs1571345 C T 203409 Spleen 0.372837 551138
chr1 110267851 rs115430557 A G,T 185013 Ovary 0.396497 547703
chr1 109641000 rs67062154 TG T 811864 Liver 0.29115 544715
chr1 110647261 rs116009334 C T 173647 Stomach 0.25783 550910
chr1 110417992 rs146837780 G T 34872 Adrenal 0.0471561 549154
Details of CSF1[ENSG00000184371.9]
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Genomic Location chr1:110452864-110473614[+]
TSS 110452864
Gene Name CSF1
Ensembl ID ENSG00000184371.9
ENTREZID 1435
Uniprot
P09603
A0A024R0A1
Protein Name
Macrophage colony-stimulating factor 1
Expression levels of CSF1[ENSG00000184371.9]
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