EnhancerDB
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Enhancers that regulate VMAC[ENSG00000187650.3]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 5797305 5811275 enh48157 5904869 93594
Bone Marrow (K562) Prostate (RWPE1) Blood (T-cell) Muscle (A673) Lung (PC-9) Pancreas Thymus Stomach
chr19 5829202 5829624 vista28400 5904869 75245
VISTA
chr19 5873385 5885719 enh52839 5904869 19150
Liver (HepG2) Large Intestine Esophagus Heart Stomach
chr19 5880679 5880918 vista28401 5904869 23951
VISTA
chr19 5890213 5894363 enh65169 5904869 10506
Heart
chr19 5898990 5899031 vista28402 5904869 5838
VISTA
chr19 5940860 5941142 vista28403 5904869 35991
VISTA
chr19 5941853 5970935 enh4982 5904869 36984
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr19 5953003 5953253 vista28404 5904869 48134
VISTA
chr19 5966194 5966581 vista28405 5904869 61325
VISTA
chr19 5968077 5968307 vista28406 5904869 63208
VISTA
chr19 5968660 5968756 vista28407 5904869 63791
VISTA
chr19 5983365 5992702 enh32880 5904869 78496
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Thymus Stomach
chr19 5989815 5989915 vista28408 5904869 84946
VISTA
Transcript facotrs that regulate VMAC[ENSG00000187650.3]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with VMAC[ENSG00000187650.3], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr19 6768822 rs111919165 C T 857958 Esophagus 0.295824 5417301
chr19 5876463 rs397859518 CT C 28406 Esophagus 3.50499e-18 5411164
chr19 5892382 rs1678867 C T 12487 Heart 0.376587 5411346
chr19 5524721 rs17271855 C T 380148 Heart 0.20809 5409698
chr19 5691933 rs11551019 G A 212936 Pancreas 0.182191 5410475
chr19 6795733 rs112495019 C T 884869 Spleen 0.182343 5417760
chr19 5903807 rs8108064 G T 1062 Thyroid 3.83305e-07 5411414
chr19 6312290 rs72981971 T C 401426 Liver 0.163084 5414015
chr19 4966382 rs117078498 A G 938487 Adrenal 0.315483 5404967
Details of VMAC[ENSG00000187650.3]
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Genomic Location chr19:5904869-5910864[+]
TSS 5904869
Gene Name VMAC
Ensembl ID ENSG00000187650.3
ENTREZID 400673
Uniprot
Q2NL98
Protein Name
isoform CRA_a
Vimentin-type IF-associated coiled-coil protein
Vimentin-type intermediate filament-associated coiled-coil protein
Expression levels of VMAC[ENSG00000187650.3]
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