EnhancerDB
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Enhancers that regulate PABPN1L[ENSG00000205022.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr16 88819352 88850435 enh16903 88933068 82633
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr16 88835950 88836275 vista23514 88933068 96793
VISTA
chr16 88836450 88836610 vista23515 88933068 96458
VISTA
chr16 88837093 88837695 vista23516 88933068 95373
VISTA
chr16 88839181 88839507 vista23517 88933068 93561
VISTA
chr16 88839973 88840262 vista23518 88933068 92806
VISTA
chr16 88847421 88847701 vista23519 88933068 85367
VISTA
chr16 88848168 88848452 vista23520 88933068 84616
VISTA
chr16 88848890 88849172 vista23521 88933068 83896
VISTA
chr16 88855160 88863461 enh47985 88933068 69607
Liver (HepG2) Blood (T-cell) Thymus Blood (OCI-LY7)
chr16 88857121 88857244 vista23522 88933068 75824
VISTA
chr16 88860126 88860280 vista23523 88933068 72788
VISTA
chr16 88865592 88865963 vista23524 88933068 67105
VISTA
chr16 88866491 88866710 vista23525 88933068 66358
VISTA
chr16 88866965 88874855 enh4186 88933068 58213
Blood (Karpas-422)
chr16 88919657 88920044 vista23526 88933068 13024
VISTA
chr16 88921143 88921285 vista23527 88933068 11783
VISTA
chr16 88946220 88957735 enh44357 88933068 13152
Muscle (A673) Muscle (Myotube) Stomach
chr16 88955496 88955935 vista23528 88933068 22428
VISTA
chr16 88968900 88968980 vista23529 88933068 35832
VISTA
chr16 88969235 88997095 enh16904 88933068 36167
Bone Marrow (K562) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
chr16 88969739 88970176 vista23530 88933068 36671
VISTA
chr16 88988977 88989104 vista23531 88933068 55909
VISTA
chr16 88991704 88992157 vista23532 88933068 58636
VISTA
chr16 89029754 89041849 enh47986 88933068 96686
Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Thymus Stomach
Transcript facotrs that regulate PABPN1L[ENSG00000205022.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr16 88919498 88929400 TCF7L2 GTRD no Colon (HCT116) 88933068 3668 108224134
chr16 88919498 88929400 TCF7L2 GTRD no Colon (HCT116) 88933068 3668 108224135
chr16 88920476 88930047 ZNF143 GTRD no Epithelial (MCF-7) 88933068 3021 108224145
chr16 88920484 88929535 TCF7L2 GTRD no Colon (HCT116) 88933068 3533 108224146
chr16 88920512 88929907 ZNF143 GTRD no Epithelial (MCF-7) 88933068 3161 108224150
chr16 88920558 88930069 ZNF143 GTRD no Epithelial (MCF-7) 88933068 2999 108224154
chr16 88921205 88928440 TCF7L2 GTRD no Colon (HCT116) 88933068 4628 108224195
chr16 88921246 88929472 ZNF143 GTRD no Epithelial (MCF-7) 88933068 3596 108224198
chr16 88921252 88930071 ZNF143 GTRD no Epithelial (MCF-7) 88933068 2997 108224199
SNPs associated with PABPN1L[ENSG00000205022.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr16 89402634 rs3096319 C G 469566 Breast 0.158533 4675108
chr16 88292754 rs61172817 A G 635280 Uterus 0.441781 4660187
chr16 89106108 rs111616786 G A 173040 Thyroid 0.114104 4671779
chr16 89102499 rs74034533 C T 169431 Liver 0.360311 4671713
chr16 89572732 rs75746799 G A 639664 Adrenal 0.317431 4677536
Details of PABPN1L[ENSG00000205022.5]
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Genomic Location chr16:88928034-88933068[-]
TSS 88933068
Gene Name PABPN1L
Ensembl ID ENSG00000205022.5
ENTREZID 390748
Uniprot
B6RF28
A6NDY0
Protein Name
Embryonic polyadenylate-binding protein 2
Expression levels of PABPN1L[ENSG00000205022.5]
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