EnhancerDB
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Enhancers that regulate C19orf38[ENSG00000214212.4]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 10832365 10873258 enh5002 10947251 73993
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr19 10862011 10862152 vista28600 10947251 85099
VISTA
chr19 10863039 10863158 vista28601 10947251 84093
VISTA
chr19 10865897 10866291 vista28602 10947251 80960
VISTA
chr19 10874125 10883015 enh65173 10947251 64236
Thyroid Epithelial (MCF-7) Heart
chr19 10884970 10890583 enh60748 10947251 56668
Blood (OCI-LY7)
chr19 10898645 10902795 enh52845 10947251 44456
Large Intestine
chr19 10918125 10930655 enh17917 10947251 16596
Bone Marrow (K562) Astrocyte Bone (Osteoblast) Placenta Uterus Blood (T-cell) Stomach
chr19 10925932 10926095 vista28603 10947251 21156
VISTA
chr19 10928296 10928707 vista28604 10947251 18544
VISTA
chr19 10949257 10949551 vista28605 10947251 2006
VISTA
chr19 10955666 10955680 vista28606 10947251 8415
VISTA
chr19 10983266 10983642 vista28607 10947251 36015
VISTA
chr19 10983285 11012541 enh5003 10947251 36034
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr19 10983653 10983862 vista28608 10947251 36402
VISTA
chr19 10987245 10987998 vista28609 10947251 39994
VISTA
chr19 10988040 10988081 vista28610 10947251 40789
VISTA
chr19 10989126 10989500 vista28611 10947251 41875
VISTA
chr19 10992105 10992492 vista28612 10947251 44854
VISTA
chr19 10999263 10999360 vista28613 10947251 52012
VISTA
chr19 11044165 11061272 enh17918 10947251 96914
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr19 11044199 11044446 vista28614 10947251 96948
VISTA
Transcript facotrs that regulate C19orf38[ENSG00000214212.4]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 10949022 10949426 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 10947251 1771 108384140
chr19 10949031 10949387 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 10947251 1780 108384141
chr19 10949086 10949446 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 10947251 1835 108384142
chr19 10949088 10949464 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 10947251 1837 108384143
chr19 10949099 10949409 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 10947251 1848 108384144
chr19 10949105 10949545 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 10947251 1854 108384145
chr19 10949172 10949331 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 10947251 1921 108384146
chr19 10949266 10949279 SMAD2 JASPAR yes 10947251 2015 70803211
chr19 10949266 10949280 TLX1 JASPAR yes 10947251 2015 70803212
chr19 10949282 10949297 HNF4A JASPAR yes 10947251 2031 70803213
chr19 10949325 10949335 BARHL2 JASPAR yes 10947251 2074 70803214
chr19 10949328 10949338 HOXB13 JASPAR yes 10947251 2077 70803215
chr19 10949393 10949397 H4TF2 TRANSFAC yes 10947251 2142 70803216
chr19 10949447 10949460 POU2F2 JASPAR yes 10947251 2196 70803217
chr19 10949447 10949461 POU1F1 JASPAR yes 10947251 2196 70803218
chr19 10949448 10949460 POU3F1 JASPAR yes 10947251 2197 70803219
chr19 10949448 10949460 POU3F2 JASPAR yes 10947251 2197 70803220
chr19 10949449 10949461 POU2F1 JASPAR yes 10947251 2198 70803221
chr19 10949450 10949459 POU3F4 JASPAR yes 10947251 2199 70803222
chr19 10949450 10949459 POU5F1B JASPAR yes 10947251 2199 70803223
chr19 10949451 10949459 FOXL1 JASPAR yes 10947251 2200 70803224
chr19 10949467 10949479 GRHL1 JASPAR yes 10947251 2216 70803225
chr19 10949468 10949478 TFCP2 JASPAR yes 10947251 2217 70803226
chr19 10949468 10949488 TP63 JASPAR yes 10947251 2217 70803227
chr19 10949479 10949488 SNAI2 JASPAR yes 10947251 2228 70803228
chr19 10949479 10949489 FIGLA JASPAR yes 10947251 2228 70803229
chr19 10949479 10949489 ID4 JASPAR yes 10947251 2228 70803230
chr19 10949479 10949489 MSC JASPAR yes 10947251 2228 70803231
chr19 10949479 10949489 MYF6 JASPAR yes 10947251 2228 70803232
chr19 10949479 10949489 TCF3 JASPAR yes 10947251 2228 70803233
chr19 10949479 10949489 TCF4 JASPAR yes 10947251 2228 70803234
chr19 10949481 10949490 ZEB1 JASPAR yes 10947251 2230 70803235
chr19 10949488 10949501 POU2F2 JASPAR yes 10947251 2237 70803236
chr19 10949488 10949502 POU1F1 JASPAR yes 10947251 2237 70803237
chr19 10949489 10949501 POU3F1 JASPAR yes 10947251 2238 70803238
chr19 10949489 10949501 POU3F2 JASPAR yes 10947251 2238 70803239
chr19 10949490 10949494 YY1 TRANSFAC yes 10947251 2239 70803240
chr19 10949490 10949502 POU2F1 JASPAR yes 10947251 2239 70803241
chr19 10949491 10949498 POU2F1 TRANSFAC yes 10947251 2240 70803242
chr19 10949491 10949498 POU2F2C TRANSFAC yes 10947251 2240 70803243
chr19 10949491 10949498 POU2F2 TRANSFAC yes 10947251 2240 70803244
chr19 10949491 10949499 POU2F1 TRANSFAC yes 10947251 2240 70803245
chr19 10949491 10949500 POU3F4 JASPAR yes 10947251 2240 70803246
chr19 10949491 10949500 POU5F1B JASPAR yes 10947251 2240 70803247
chr19 10949499 10949509 TBX21 JASPAR yes 10947251 2248 70803248
chr19 10949499 10949510 TBX20 JASPAR yes 10947251 2248 70803249
chr19 10949499 10949510 TBX2 JASPAR yes 10947251 2248 70803250
chr19 10949499 10949512 EOMES JASPAR yes 10947251 2248 70803251
chr19 10949500 10949508 MGA JASPAR yes 10947251 2249 70803252
chr19 10949500 10949508 TBX15 JASPAR yes 10947251 2249 70803253
chr19 10949500 10949508 TBX1 JASPAR yes 10947251 2249 70803254
chr19 10949500 10949508 TBX4 JASPAR yes 10947251 2249 70803255
chr19 10949500 10949508 TBX5 JASPAR yes 10947251 2249 70803256
chr19 10949500 10949510 TBR1 JASPAR yes 10947251 2249 70803257
chr19 10949509 10949524 HSF1 JASPAR yes 10947251 2258 70803258
chr19 10949515 10949520 GATA1 TRANSFAC yes 10947251 2264 70803259
chr19 10949520 10949535 HNF1A JASPAR yes 10947251 2269 70803260
chr19 10949521 10949534 HNF1B JASPAR yes 10947251 2270 70803261
chr19 10949525 10949541 POU4F2 JASPAR yes 10947251 2274 70803262
chr19 10949525 10949541 POU4F3 JASPAR yes 10947251 2274 70803263
chr19 10949527 10949541 POU4F1 JASPAR yes 10947251 2276 70803264
chr19 10949528 10949537 CDX1 JASPAR yes 10947251 2277 70803265
SNPs associated with C19orf38[ENSG00000214212.4], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr19 10115191 rs12459949 A G 832060 Heart 0.183444 5434065
chr19 11085590 rs4804557 C T 105124 Thyroid 0.215198 5440389
chr19 10062704 rs796160054 TC T 884547 Lung 0.0166291 5433983
chr19 10214214 rs144675400 C T 733037 Adrenal 0.126312 5434660
Details of C19orf38[ENSG00000214212.4]
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Genomic Location chr19:10947251-10980466[+]
TSS 10947251
Gene Name C19orf38
Ensembl ID ENSG00000214212.4
ENTREZID 255809
Uniprot
A8MVS5
Protein Name
Protein HIDE1
Expression levels of C19orf38[ENSG00000214212.4]
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