EnhancerDB

Enhancers that regulate SCAMP4[ENSG00000227500.5]

Chrom.	Start	End	Enhancer ID	TSS of gene	Distance between enhancer and TSS	Tissues that enhancer appears
chr19	1831016	1846300	enh17844	1905213	58913	Bone Marrow (K562) Liver (HepG2) Brain (SK-N-SH) Prostate (RWPE1) Ovary Bone (Osteoblast) Stomach Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Heart
chr19	1840916	1841078	vista28179	1905213	64135	VISTA
chr19	1850045	1876795	enh4955	1905213	28418	Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (GM12878) Placenta Blood (Karpas-422) Pancreas Uterus Thymus
chr19	1855247	1855761	vista28180	1905213	49452	VISTA
chr19	1856794	1856864	vista28181	1905213	48349	VISTA
chr19	1857160	1857480	vista28182	1905213	47733	VISTA
chr19	1893405	1900210	enh17845	1905213	5003	Bone Marrow (K562) Liver (HepG2) Blood (T-cell) Esophagus Lung Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Pancreas Pancreas (Panc1) Uterus Thymus Heart
chr19	1895445	1895653	vista28183	1905213	9560	VISTA
chr19	1901962	1902304	vista28184	1905213	2909	VISTA
chr19	1909763	1910077	vista28185	1905213	4550	VISTA
chr19	1927128	1931886	enh89915	1905213	21915	Bone Marrow (K562) Prostate (RWPE1)
chr19	1941720	1950194	enh17846	1905213	36507	Brain (SK-N-SH) Prostate (RWPE1) Esophagus Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (T-cell)
chr19	1942393	1942508	vista28186	1905213	37180	VISTA
chr19	1942586	1943099	vista28187	1905213	37373	VISTA
chr19	1943207	1943298	vista28188	1905213	37994	VISTA
chr19	1951204	1955340	enh115682	1905213	45991	Brain (SK-N-SH)
chr19	1959685	1963835	enh99533	1905213	54472	Uterus
chr19	1964305	1968455	enh107747	1905213	59092	Blood (T-cell)

Transcript facotrs that regulate SCAMP4[ENSG00000227500.5]

Chrom.	Start	End	TF name	Source	Predicted site?	Tissue	TSS of gene	Distance between TFBS and gene	id
chr19	1901634	1902481	ZNF274	GTRD	no	Liver (HepG2)	1905213	2732	108355775
chr19	1901789	1902489	ZNF274	GTRD	no	Liver (HepG2)	1905213	2724	108355776
chr19	1901791	1902578	ZNF274	GTRD	no	Liver (HepG2)	1905213	2635	108355777
chr19	1901817	1902562	ZNF274	GTRD	no	Liver (HepG2)	1905213	2651	108355778
chr19	1901852	1902279	ZNF274	GTRD	no	Liver (HepG2)	1905213	2934	108355779
chr19	1901865	1902285	ZNF274	GTRD	no	Liver (HepG2)	1905213	2928	108355780
chr19	1901875	1902271	ZNF274	GTRD	no	Liver (HepG2)	1905213	2942	108355781
chr19	1901882	1902325	ZNF274	GTRD	no	Liver (HepG2)	1905213	2888	108355782
chr19	1901884	1902338	ZNF274	GTRD	no	Liver (HepG2)	1905213	2875	108355783
chr19	1901910	1902577	ZNF274	GTRD	no	Liver (HepG2)	1905213	2636	108355784
chr19	1901935	1902311	ZNF274	ENCODE Uniform TFBS	no	Liver (HepG2)	1905213	2902	108355785
chr19	1901943	1902473	ZNF274	GTRD	no	Liver (HepG2)	1905213	2740	108355786
chr19	1901960	1902184	ZNF274	ENCODE Uniform TFBS	no	Liver (HepG2)	1905213	3029	108355787
chr19	1901964	1901972	MEIS3	JASPAR	yes		1905213	3241	70781285
chr19	1901965	1901969	NFE	TRANSFAC	yes		1905213	3244	70781286
chr19	1901974	1901979	SP1	TRANSFAC	yes		1905213	3234	70781287
chr19	1901980	1901990	SP1	JASPAR	yes		1905213	3223	70781288
chr19	1902007	1902022	HSF1	JASPAR	yes		1905213	3191	70781289
chr19	1902008	1902021	HSF4	JASPAR	yes		1905213	3192	70781290
chr19	1902044	1902049	TFAP2A	TRANSFAC	yes		1905213	3164	70781291
chr19	1902044	1902050	MZF1	JASPAR	yes		1905213	3163	70781292
chr19	1902059	1902070	NFE2L2	JASPAR	yes		1905213	3143	70781293
chr19	1902061	1902072	CEBPA	JASPAR	yes		1905213	3141	70781294
chr19	1902062	1902073	CEBPB	JASPAR	yes		1905213	3140	70781295
chr19	1902071	1902075	YY1	TRANSFAC	yes		1905213	3138	70781296
chr19	1902089	1902105	T	JASPAR	yes		1905213	3108	70781297
chr19	1902094	1902098	YY1	TRANSFAC	yes		1905213	3115	70781298
chr19	1902103	1902121	RARA	JASPAR	yes		1905213	3092	70781299
chr19	1902108	1902114	MAZ	TRANSFAC	yes		1905213	3099	70781300
chr19	1902108	1902126	NR3C1	JASPAR	yes		1905213	3087	70781301
chr19	1902113	1902117	ESR1	TRANSFAC	yes		1905213	3096	70781302
chr19	1902124	1902139	FOXP1	JASPAR	yes		1905213	3074	70781303
chr19	1902143	1902156	SMAD2	JASPAR	yes		1905213	3057	70781304
chr19	1902146	1902154	MEIS2	JASPAR	yes		1905213	3059	70781305
chr19	1902146	1902154	MEIS3	JASPAR	yes		1905213	3059	70781306
chr19	1902147	1902151	NFE	TRANSFAC	yes		1905213	3062	70781307
chr19	1902162	1902176	CREB3	JASPAR	yes		1905213	3037	70781308
chr19	1902164	1902173	NKX2-8	JASPAR	yes		1905213	3040	70781309
chr19	1902164	1902174	NKX2-3	JASPAR	yes		1905213	3039	70781310
chr19	1902176	1902184	MGA	JASPAR	yes		1905213	3029	70781311
chr19	1902185	1902195	SREBF1	JASPAR	yes		1905213	3018	70781312
chr19	1902187	1902204	ESR1	JASPAR	yes		1905213	3009	70781313
chr19	1902204	1902217	TFAP2A	JASPAR	yes		1905213	2996	70781314
chr19	1902204	1902217	TFAP2B	JASPAR	yes		1905213	2996	70781315
chr19	1902204	1902217	TFAP2C	JASPAR	yes		1905213	2996	70781316
chr19	1902205	1902216	EBF1	JASPAR	yes		1905213	2997	70781317
chr19	1902220	1902226	YY1	JASPAR	yes		1905213	2987	70781318
chr19	1902236	1902248	TFAP2A	JASPAR	yes		1905213	2965	70781319
chr19	1902236	1902248	TFAP2B	JASPAR	yes		1905213	2965	70781320
chr19	1902250	1902524	ZNF274	GTRD	no	Liver (HepG2)	1905213	2689	108355788
chr19	1902283	1902304	IRF1	JASPAR	yes		1905213	2909	70781321
chr19	1902284	1902299	FOXP1	JASPAR	yes		1905213	2914	70781322
chr19	1902286	1902301	FOXP1	JASPAR	yes		1905213	2912	70781323
chr19	1902288	1902303	FOXP1	JASPAR	yes		1905213	2910	70781324
chr19	1902289	1902304	FOXP1	JASPAR	yes		1905213	2909	70781325
chr19	1908910	1910094	ZNF274	GTRD	no	Blood (GM12878)	1905213	3697	108355789
chr19	1909034	1910036	TCF7L2	GTRD	no	Colon (HCT116)	1905213	3821	108355790
chr19	1909088	1909798	ZNF143	GTRD	no	Epithelial (MCF-7)	1905213	3875	108355791
chr19	1909090	1910401	TCF7L2	GTRD	no	Colon (HCT116)	1905213	3877	108355792
chr19	1909116	1910107	ZNF143	GTRD	no	Epithelial (MCF-7)	1905213	3903	108355793
chr19	1909118	1909867	ZNF143	GTRD	no	Epithelial (MCF-7)	1905213	3905	108355794
chr19	1909236	1909920	ZNF143	GTRD	no	Epithelial (MCF-7)	1905213	4023	108355795
chr19	1909270	1909922	ZNF274	GTRD	no	Blood (GM12878)	1905213	4057	108355796
chr19	1909286	1909882	ZNF143	GTRD	no	Epithelial (MCF-7)	1905213	4073	108355797
chr19	1909348	1910004	ZNF143	GTRD	no	Epithelial (MCF-7)	1905213	4135	108355798
chr19	1909424	1909953	ZNF274	GTRD	no	Bone Marrow (K562)	1905213	4211	108355799
chr19	1909446	1909916	ZNF263	UCSC Txn Factor	no	Conserved	1905213	4233	108355800
chr19	1909476	1909954	ZBTB33	GTRD	no	Brain (SK-N-SH)	1905213	4263	108355801
chr19	1909596	1910301	ZNF274	GTRD	no	Blood (GM12878)	1905213	4383	108355802
chr19	1909769	1909775	JUN	TRANSFAC	yes		1905213	4556	70781326
chr19	1909824	1909837	ZBTB18	JASPAR	yes		1905213	4611	70781327
chr19	1909825	1909835	NHLH1	JASPAR	yes		1905213	4612	70781328
chr19	1909831	1909843	TEAD1	JASPAR	yes		1905213	4618	70781329
chr19	1909833	1909843	TEAD1	JASPAR	yes		1905213	4620	70781330
chr19	1909833	1909843	TEAD4	JASPAR	yes		1905213	4620	70781331
chr19	1909834	1909842	TEAD3	JASPAR	yes		1905213	4621	70781332
chr19	1909842	1909846	ESR1	TRANSFAC	yes		1905213	4629	70781333
chr19	1909853	1909858	ETS2	TRANSFAC	yes		1905213	4640	70781334
chr19	1909870	1909880	SP1	JASPAR	yes		1905213	4657	70781335
chr19	1909872	1909878	MAZ	TRANSFAC	yes		1905213	4659	70781336
chr19	1909926	1910506	ZNF274	GTRD	no	Blood (GM12878)	1905213	4713	108355803
chr19	1909955	1909970	FOXA1	JASPAR	yes		1905213	4742	70781337
chr19	1909957	1909968	FOXP2	JASPAR	yes		1905213	4744	70781338
chr19	1909958	1909966	FOXD1	JASPAR	yes		1905213	4745	70781339
chr19	1909958	1909966	FOXG1	JASPAR	yes		1905213	4745	70781340
chr19	1909958	1909966	FOXO3	JASPAR	yes		1905213	4745	70781341
chr19	1909959	1909966	FOXD2	JASPAR	yes		1905213	4746	70781342
chr19	1909959	1909966	FOXI1	JASPAR	yes		1905213	4746	70781343
chr19	1909959	1909966	FOXL1	JASPAR	yes		1905213	4746	70781344
chr19	1909959	1909966	FOXO4	JASPAR	yes		1905213	4746	70781345
chr19	1909959	1909966	FOXO6	JASPAR	yes		1905213	4746	70781346
chr19	1909959	1909966	FOXP3	JASPAR	yes		1905213	4746	70781347
chr19	1909959	1909967	FOXO3	JASPAR	yes		1905213	4746	70781348
chr19	1909959	1909970	FOXA1	JASPAR	yes		1905213	4746	70781349
chr19	1909966	1909981	HSF1	JASPAR	yes		1905213	4753	70781350
chr19	1909975	1909995	RREB1	JASPAR	yes		1905213	4762	70781351
chr19	1909979	1909984	SP1	TRANSFAC	yes		1905213	4766	70781352
chr19	1910017	1910027	SP1	JASPAR	yes		1905213	4804	70781353
chr19	1910019	1910025	MAZ	TRANSFAC	yes		1905213	4806	70781354
chr19	1910024	1910029	SP1	TRANSFAC	yes		1905213	4811	70781355
chr19	1910038	1910487	ZNF274	GTRD	no	Bone Marrow (K562)	1905213	4825	108355804
chr19	1910043	1910053	NFIA	JASPAR	yes		1905213	4830	70781356
chr19	1910044	1910053	NFIX	JASPAR	yes		1905213	4831	70781357
chr19	1910045	1910051	NFIC	JASPAR	yes		1905213	4832	70781358
chr19	1910049	1910518	ZBTB33	GTRD	no	Brain (SK-N-SH)	1905213	4836	108355805
chr19	1910061	1910065	NFE	TRANSFAC	yes		1905213	4848	70781359

Chrom.	Position	dbSNP ID	Reference Allele	Alternative Allele	Distance between TSS and SNP	Tissue	q Value	id
chr19	2841718	rs11667713	C	T	915702	Esophagus	0.318653	5389221
chr19	1811985	rs140903369	C	T	93228	Esophagus	0.200847	5378505
chr19	1873261	rs10416817	C	T	31952	Heart	0.111963	5379185
chr19	1853983	rs398033691	TG	T	51230	Heart	0.125421	5378925
chr19	1910282	rs12971714	G	C	0	Pancreas	0.163072	5379496
chr19	1646177	rs181061986	G	A	259036	Spleen	0.393467	5377144
chr19	1213492	rs59951593	T	C	691721	Thyroid	0.00210837	5373370
chr19	2616970	rs74862533	A	G	690954	Liver	0.132766	5387059
chr19	1088078	rs2238586	G	T	817135	Adrenal	0.0475085	5371485

Genomic Location	chr19:1905213-1926016[+]
TSS	1905213
Gene Name	SCAMP4
Ensembl ID	ENSG00000227500.5
ENTREZID	113178
Uniprot
Uniprot	Q969E2
Protein Name
	Secretory carrier-associated membrane protein
	Secretory carrier-associated membrane protein 4

EnhancerDB

Enhancers that regulate SCAMP4[ENSG00000227500.5]

Transcript facotrs that regulate SCAMP4[ENSG00000227500.5]

SNPs associated with SCAMP4[ENSG00000227500.5], confirmed by eQTL

Details of SCAMP4[ENSG00000227500.5]

Expression levels of SCAMP4[ENSG00000227500.5]