EnhancerDB
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Enhancers that regulate RFX2[ENSG00000087903.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 6084063 6113078 enh17886 6199583 86505
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr19 6105811 6106211 vista28421 6199583 93372
VISTA
chr19 6108691 6108922 vista28422 6199583 90661
VISTA
chr19 6108978 6109271 vista28423 6199583 90312
VISTA
chr19 6111447 6111675 vista28424 6199583 87908
VISTA
chr19 6123503 6128736 enh89919 6199583 70847
Prostate (RWPE1)
chr19 6132012 6132373 vista28425 6199583 67210
VISTA
chr19 6169665 6174275 enh17887 6199583 25308
Placenta
chr19 6189136 6189412 vista28426 6199583 10171
VISTA
chr19 6217780 6225995 enh17888 6199583 18197
Placenta Bone (Osteoblast) Stomach
chr19 6228782 6229121 vista28427 6199583 29199
VISTA
chr19 6230503 6255735 enh4983 6199583 30920
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-MC) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Uterus Thymus Heart
chr19 6238228 6238618 vista28428 6199583 38645
VISTA
chr19 6257625 6278924 enh17889 6199583 58042
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Bone (Osteoblast) Lung Stomach Placenta Thyroid Pancreas Uterus Heart
chr19 6271729 6272422 vista28429 6199583 72146
VISTA
chr19 6273754 6274259 vista28430 6199583 74171
VISTA
chr19 6276497 6276777 vista28431 6199583 76914
VISTA
Transcript facotrs that regulate RFX2[ENSG00000087903.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with RFX2[ENSG00000087903.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr19 7078321 rs2914567 G T 878738 Esophagus 0.135629 5418571
chr19 7147516 rs16994221 G C 947933 Pancreas 0.067296 5419116
chr19 6258074 rs34263337 G A 58491 Breast 0.325183 5413676
chr19 6725397 rs76193648 G A 525814 Spleen 0.052033 5417060
chr19 6241623 rs118069413 G A 42040 Ovary 0.315728 5413478
Details of RFX2[ENSG00000087903.8]
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Genomic Location chr19:5993175-6199583[-]
TSS 6199583
Gene Name RFX2
Ensembl ID ENSG00000087903.8
ENTREZID 5990
Uniprot
P48378
Protein Name
[AA 620-723]
DNA-binding protein RFX2
RFX2_HUMAN
Expression levels of RFX2[ENSG00000087903.8]
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