EnhancerDB
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Enhancers that regulate CDC6[ENSG00000094804.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 38353865 38360315 enh17138 38443885 83570
Placenta Uterus Brain (SK-N-MC) Liver (HepG2)
chr17 38359505 38359802 vista24690 38443885 84083
VISTA
chr17 38363685 38367987 enh44428 38443885 75898
Muscle (Myoblast) Muscle (Myotube) Bone (Osteoblast)
chr17 38365489 38365514 vista24691 38443885 78371
VISTA
chr17 38374652 38374886 vista24692 38443885 68999
VISTA
chr17 38376745 38383295 enh32189 38443885 60590
Skin (Keratinocyte) Astrocyte Bone (Osteoblast) Thyroid Pancreas Stomach
chr17 38389405 38393555 enh109767 38443885 50330
Stomach
chr17 38396950 38410272 enh17139 38443885 33613
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Liver Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Thyroid Adrenal Lung (PC-9) Muscle (Myoblast) Uterus
chr17 38422445 38426655 enh92723 38443885 17230
Liver (HepG2) Stomach
chr17 38440755 38440955 vista24693 38443885 2930
VISTA
chr17 38463228 38485935 enh4408 38443885 19343
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Blood (T-cell) Heart
chr17 38463315 38463694 vista24694 38443885 19430
VISTA
chr17 38464298 38464708 vista24695 38443885 20413
VISTA
chr17 38466457 38466702 vista24696 38443885 22572
VISTA
chr17 38467869 38468243 vista24697 38443885 23984
VISTA
chr17 38468655 38468865 vista24698 38443885 24770
VISTA
chr17 38470934 38471197 vista24699 38443885 27049
VISTA
chr17 38475638 38476939 vista24700 38443885 31753
VISTA
chr17 38477236 38480096 vista24701 38443885 33351
VISTA
chr17 38480180 38480741 vista24702 38443885 36295
VISTA
chr17 38480804 38481074 vista24703 38443885 36919
VISTA
chr17 38481659 38482183 vista24704 38443885 37774
VISTA
chr17 38482426 38483282 vista24705 38443885 38541
VISTA
chr17 38483867 38484266 vista24706 38443885 39982
VISTA
chr17 38486105 38510075 enh60669 38443885 42220
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Lung (PC-9) Uterus Blood (T-cell) Stomach
chr17 38488015 38488253 vista24707 38443885 44130
VISTA
chr17 38490291 38490758 vista24708 38443885 46406
VISTA
chr17 38494493 38494615 vista24709 38443885 50608
VISTA
chr17 38494956 38495329 vista24710 38443885 51071
VISTA
chr17 38496652 38496786 vista24711 38443885 52767
VISTA
chr17 38502716 38503032 vista24712 38443885 58831
VISTA
chr17 38509274 38509600 vista24713 38443885 65389
VISTA
chr17 38514847 38514935 vista24714 38443885 70962
VISTA
chr17 38526885 38531921 enh94969 38443885 83000
Muscle (Myoblast) Lung (PC-9)
Transcript facotrs that regulate CDC6[ENSG00000094804.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 38440135 38441140 ZBTB33 GTRD no Lung (A549) 38443885 2745 108254206
chr17 38440493 38440763 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 38443885 3122 108254207
chr17 38440525 38441159 TCF7L2 GTRD no Colon (HCT116) 38443885 2726 108254208
chr17 38440528 38441187 ZNF274 GTRD no Blood (GM12878) 38443885 2698 108254209
chr17 38440565 38441649 TCF7L2 GTRD no Colon (HCT116) 38443885 2236 108254210
chr17 38440568 38441098 ZBTB33 GTRD no Lung (A549) 38443885 2787 108254211
chr17 38440609 38441024 ZNF274 GTRD no Cervix (HeLa-S3) 38443885 2861 108254212
chr17 38440656 38440946 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 38443885 2939 108254213
chr17 38440680 38441020 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 38443885 2865 108254214
chr17 38440691 38440907 ZNF274 GTRD no Liver (HepG2) 38443885 2978 108254215
chr17 38440711 38440961 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 38443885 2924 108254216
chr17 38440713 38441033 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 38443885 2852 108254217
chr17 38440748 38440978 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 38443885 2907 108254218
chr17 38440767 38440772 ETS2 TRANSFAC yes 38443885 3113 21232935
chr17 38440770 38440779 SOX9 JASPAR yes 38443885 3106 21232936
chr17 38440774 38440784 NFATC3 JASPAR yes 38443885 3101 21232937
chr17 38440776 38440783 NFATC2 JASPAR yes 38443885 3102 21232938
chr17 38440779 38440790 PROP1 JASPAR yes 38443885 3095 21232939
chr17 38440780 38440790 PAX7 JASPAR yes 38443885 3095 21232940
chr17 38440803 38441509 SOX2 GTRD no Neural Stem Cells (H9) 38443885 2376 108254219
chr17 38440822 38440828 NFE2 TRANSFAC yes 38443885 3057 21232941
chr17 38440830 38440844 PLAG1 JASPAR yes 38443885 3041 21232942
chr17 38440839 38440844 TFAP2A TRANSFAC yes 38443885 3041 21232943
chr17 38440839 38440845 MZF1 JASPAR yes 38443885 3040 21232944
chr17 38440856 38440868 JDP2 JASPAR yes 38443885 3017 21232945
chr17 38440856 38440871 JUND JASPAR yes 38443885 3014 21232946
chr17 38440857 38440870 JUN JASPAR yes 38443885 3015 21232947
chr17 38440858 38440865 JUN TRANSFAC yes 38443885 3020 21232948
chr17 38440875 38441398 SOX2 GTRD no Neural Stem Cells (H9) 38443885 2487 108254220
chr17 38440884 38440888 YY1 TRANSFAC yes 38443885 2997 21232949
chr17 38440885 38440898 EOMES JASPAR yes 38443885 2987 21232950
chr17 38440887 38440897 TBR1 JASPAR yes 38443885 2988 21232951
chr17 38440887 38440898 TBX20 JASPAR yes 38443885 2987 21232952
chr17 38440887 38440898 TBX2 JASPAR yes 38443885 2987 21232953
chr17 38440888 38440898 TBX21 JASPAR yes 38443885 2987 21232954
chr17 38440888 38440902 PAX6 JASPAR yes 38443885 2983 21232955
chr17 38440896 38440907 PHOX2A JASPAR yes 38443885 2978 21232956
chr17 38440896 38440907 PROP1 JASPAR yes 38443885 2978 21232957
chr17 38440898 38440903 MYB TRANSFAC yes 38443885 2982 21232958
chr17 38440927 38440938 TBX2 JASPAR yes 38443885 2947 21232959
chr17 38440928 38440936 MGA JASPAR yes 38443885 2949 21232960
chr17 38440928 38440936 TBX15 JASPAR yes 38443885 2949 21232961
chr17 38440928 38440936 TBX1 JASPAR yes 38443885 2949 21232962
chr17 38440928 38440936 TBX4 JASPAR yes 38443885 2949 21232963
chr17 38440928 38440936 TBX5 JASPAR yes 38443885 2949 21232964
chr17 38440928 38440941 SMAD2 JASPAR yes 38443885 2944 21232965
chr17 38440933 38440940 JUN TRANSFAC yes 38443885 2945 21232966
chr17 38440933 38440940 SP1 TRANSFAC yes 38443885 2945 21232967
chr17 38440935 38440949 TCF7L2 JASPAR yes 38443885 2936 21232968
chr17 38440941 38441697 ZNF274 GTRD no Bone Marrow (K562) 38443885 2188 108254221
SNPs associated with CDC6[ENSG00000094804.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 38720720 rs12453886 C T 261549 Esophagus 0.165888 4868365
chr17 38052344 rs574491624 A G 391541 Esophagus 0.284786 4864244
chr17 38077298 rs145809834 C G 366587 Heart 0.18751 4864348
chr17 38684034 rs78314658 T A 224863 Heart 0.155879 4867901
chr17 38666980 rs796243371 GT G 207809 Breast 0.367159 4867659
chr17 38424576 rs117125160 A G 19309 Spleen 0.210836 4865987
chr17 38109075 rs28618095 T C 334810 Ovary 0.425799 4864513
chr17 38160278 rs143804445 C T 283607 Thyroid 0.161098 4864600
chr17 38633134 rs7224214 C A 173963 Stomach 0.122638 4867265
chr17 37461149 rs12449642 A T 982736 Adrenal 0.343645 4861513
Details of CDC6[ENSG00000094804.5]
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Genomic Location chr17:38443885-38459171[+]
TSS 38443885
Gene Name CDC6
Ensembl ID ENSG00000094804.5
ENTREZID 990
Uniprot
Q99741
A0A024R1S2
Protein Name
CDC6 cell division cycle 6 homolog
Cell division control protein 6 homolog
Expression levels of CDC6[ENSG00000094804.5]
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