EnhancerDB
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Enhancers that regulate SF3A2[ENSG00000104897.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 2139265 2151035 enh69529 2236520 85485
Bone (Osteoblast) Blood (GM12878) Muscle (A673) Neural Stem Cells (H9) Blood (T-cell)
chr19 2151719 2162716 enh17847 2236520 73804
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myoblast) Breast Muscle (Myotube)
chr19 2162744 2162943 vista28201 2236520 73577
VISTA
chr19 2165096 2165788 vista28202 2236520 70732
VISTA
chr19 2165405 2178635 enh32873 2236520 57885
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Large Intestine Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Thyroid Pancreas Blood (T-cell) Heart
chr19 2167436 2167667 vista28203 2236520 68853
VISTA
chr19 2168320 2168637 vista28204 2236520 67883
VISTA
chr19 2168890 2169464 vista28205 2236520 67056
VISTA
chr19 2171377 2171588 vista28206 2236520 64932
VISTA
chr19 2171641 2172019 vista28207 2236520 64501
VISTA
chr19 2178953 2187344 enh32874 2236520 49176
Astrocyte Peripheral Blood (MM.1S) Bone (Osteoblast) Heart
chr19 2182828 2183132 vista28208 2236520 53388
VISTA
chr19 2186180 2186319 vista28209 2236520 50201
VISTA
chr19 2189110 2189498 vista28210 2236520 47022
VISTA
chr19 2254465 2268755 enh48148 2236520 17945
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Esophagus Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Stomach
chr19 2264561 2264657 vista28211 2236520 28041
VISTA
chr19 2266489 2266732 vista28212 2236520 29969
VISTA
chr19 2287726 2288039 vista28213 2236520 51206
VISTA
chr19 2290835 2298208 enh65164 2236520 54315
Muscle (A673) Uterus Bone (Osteoblast) Heart
chr19 2299445 2307155 enh17848 2236520 62925
Placenta Large Intestine
chr19 2316505 2320655 enh109820 2236520 79985
Stomach
chr19 2330710 2331138 vista28214 2236520 94190
VISTA
chr19 2332363 2332647 vista28215 2236520 95843
VISTA
Transcript facotrs that regulate SF3A2[ENSG00000104897.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SF3A2[ENSG00000104897.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr19 2961594 rs112737175 A G 712916 Esophagus 0.20034 5390125
chr19 2536272 rs9749011 T C 287594 Esophagus 0.212213 5385329
chr19 2921876 rs149151070 A G 673198 Breast 0.29009 5389772
chr19 2729843 rs111665176 G A 481165 Ovary 0.427156 5388585
chr19 1311537 rs10425125 C T 924983 Liver 0.286678 5374606
chr19 2098216 rs116108188 C A 138304 Lung 0.273658 5381325
chr19 2261021 rs2865077 T A 12343 Adrenal 0.0398014 5382519
Details of SF3A2[ENSG00000104897.5]
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Genomic Location chr19:2236520-2248678[+]
TSS 2236520
Gene Name SF3A2
Ensembl ID ENSG00000104897.5
ENTREZID 8175
Uniprot
Q15428
Q05DF2
Protein Name
SF3A2 protein
Splicing factor 3A subunit 2
Expression levels of SF3A2[ENSG00000104897.5]
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