EnhancerDB
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Enhancers that regulate RAP1A[ENSG00000116473.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 111996023 111996307 vista2952 112084840 88533
VISTA
chr1 112013331 112014031 vista2953 112084840 70809
VISTA
chr1 112015702 112015900 vista2954 112084840 68940
VISTA
chr1 112037065 112041215 enh103096 112084840 43625
Peripheral Blood (MM.1S)
chr1 112039088 112039223 vista2955 112084840 45617
VISTA
chr1 112044245 112062755 enh565 112084840 22085
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 112048437 112048734 vista2956 112084840 36106
VISTA
chr1 112050044 112050594 vista2957 112084840 34246
VISTA
chr1 112058341 112058601 vista2958 112084840 26239
VISTA
chr1 112058803 112059167 vista2959 112084840 25673
VISTA
chr1 112074925 112079075 enh92098 112084840 5765
Liver (HepG2)
chr1 112078528 112078792 vista2960 112084840 6048
VISTA
chr1 112092805 112098075 enh27068 112084840 7965
Prostate (PC-3) Large Intestine Astrocyte Bone (Osteoblast) Lung (PC-9) Muscle (Myoblast)
chr1 112100545 112104695 enh49940 112084840 15705
Large Intestine
chr1 112111585 112115735 enh101137 112084840 26745
Thyroid
chr1 112116765 112127575 enh95894 112084840 31925
Stomach Lung Epithelial (MCF-7)
chr1 112128419 112151455 enh566 112084840 43579
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
chr1 112135698 112135869 vista2961 112084840 50858
VISTA
chr1 112143517 112143622 vista2962 112084840 58677
VISTA
chr1 112156504 112161373 enh60165 112084840 71664
Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (T-cell) Stomach
chr1 112163412 112163797 vista2963 112084840 78572
VISTA
chr1 112163826 112164071 vista2964 112084840 78986
VISTA
chr1 112164425 112169295 enh107403 112084840 79585
Blood (T-cell)
chr1 112180305 112184795 enh49941 112084840 95465
Liver (HepG2) Large Intestine Stomach
Transcript facotrs that regulate RAP1A[ENSG00000116473.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with RAP1A[ENSG00000116473.10], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 112053843 rs12042310 G A 30997 Heart 0.0245237 559197
chr1 112132792 rs149303140 TTTGTAGA T 0 Heart 0.228426 559774
chr1 112140475 rs1780555 A G 0 Breast 1.21171e-05 559853
chr1 112548118 rs3000754 G A 288805 Uterus 0.284066 561969
chr1 112163407 rs72695268 G A 0 Lung 0.00932783 560065
chr1 112633313 rs148161767 GA G 374000 Stomach 0.114736 562554
chr1 112548118 rs3000754 G A 288805 Adrenal 0.345332 561969
Details of RAP1A[ENSG00000116473.10]
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Genomic Location chr1:112084840-112259313[+]
TSS 112084840
Gene Name RAP1A
Ensembl ID ENSG00000116473.10
ENTREZID 5906
Uniprot
P62834
A8KAH9
Protein Name
member of RAS oncogene family
RAP1A
Ras-related protein Rap-1A
Expression levels of RAP1A[ENSG00000116473.10]
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