EnhancerDB
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Enhancers that regulate LPPR3[ENSG00000129951.14]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 718125 722275 enh109819 821967 99692
Stomach
chr19 725834 729984 enh65163 821967 91983
Heart
chr19 735865 745615 enh48146 821967 76352
Liver (HepG2) Prostate (RWPE1) Large Intestine Spleen Thymus Stomach
chr19 750220 755228 enh44618 821967 66739
Muscle (Myotube)
chr19 751766 752111 vista28103 821967 69856
VISTA
chr19 752652 753043 vista28104 821967 68924
VISTA
chr19 753188 753320 vista28105 821967 68647
VISTA
chr19 766416 774574 enh32870 821967 47393
Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Stomach
chr19 774584 785655 enh17836 821967 36312
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Thyroid Uterus Lung (PC-9) Neural Stem Cells (H9) Stomach
chr19 778993 779222 vista28106 821967 42745
VISTA
chr19 782330 783005 vista28107 821967 38962
VISTA
chr19 786808 791995 enh17837 821967 29972
Bone Marrow (K562) Esophagus Bone (Osteoblast) Stomach Placenta Neural Stem Cells (H9) Heart
chr19 789308 789721 vista28108 821967 32246
VISTA
chr19 791303 791398 vista28109 821967 30569
VISTA
chr19 791656 792058 vista28110 821967 29909
VISTA
chr19 793985 803515 enh99530 821967 18452
Uterus Blood (T-cell) Stomach
chr19 800594 800755 vista28111 821967 21212
VISTA
chr19 823657 823956 vista28112 821967 1690
VISTA
chr19 858228 870935 enh86290 821967 36261
Colon (HCT116) Uterus Stomach
chr19 863983 864016 vista28113 821967 42016
VISTA
chr19 867005 867400 vista28114 821967 45038
VISTA
chr19 884238 889523 enh115681 821967 62271
Brain (SK-N-SH)
chr19 888565 888780 vista28115 821967 66598
VISTA
chr19 903685 911642 enh4947 821967 81718
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Thymus Epithelial (MCF-7)
chr19 907464 907615 vista28116 821967 85497
VISTA
chr19 908605 908810 vista28117 821967 86638
VISTA
chr19 909116 909504 vista28118 821967 87149
VISTA
Transcript facotrs that regulate LPPR3[ENSG00000129951.14]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 823013 824455 ZNF274 GTRD no Bone Marrow (K562) 821967 1046 108347023
chr19 823280 824149 ZNF274 GTRD no Bone Marrow (K562) 821967 1313 108347024
chr19 823286 824656 ZNF274 GTRD no Bone Marrow (K562) 821967 1319 108347025
chr19 823287 824247 ZNF274 GTRD no Bone Marrow (K562) 821967 1320 108347026
chr19 823299 824708 ZNF274 GTRD no Bone Marrow (K562) 821967 1332 108347027
chr19 823302 824510 ZNF274 GTRD no Bone Marrow (K562) 821967 1335 108347028
chr19 823310 824336 ZNF274 GTRD no Bone Marrow (K562) 821967 1343 108347029
chr19 823316 824434 ZNF274 GTRD no Bone Marrow (K562) 821967 1349 108347030
chr19 823338 824289 ZNF274 GTRD no Cervix (HeLa-S3) 821967 1371 108347031
chr19 823348 824313 ZNF274 GTRD no Bone Marrow (K562) 821967 1381 108347032
chr19 823378 824183 ZNF274 GTRD no Bone Marrow (K562) 821967 1411 108347033
chr19 823388 824200 ZNF274 GTRD no Bone Marrow (K562) 821967 1421 108347034
chr19 823408 824104 POLR2A UCSC Txn Factor no Conserved 821967 1441 108347035
chr19 823430 824250 ZNF274 GTRD no Bone Marrow (K562) 821967 1463 108347036
chr19 823441 824289 ZNF274 GTRD no Bone Marrow (K562) 821967 1474 108347037
chr19 823443 824534 TCF7L2 GTRD no Colon (HCT116) 821967 1476 108347038
chr19 823446 824497 TCF7L2 GTRD no Colon (HCT116) 821967 1479 108347039
chr19 823448 824398 ZNF274 GTRD no Bone Marrow (K562) 821967 1481 108347040
chr19 823451 824533 ZNF274 GTRD no Bone Marrow (K562) 821967 1484 108347041
chr19 823454 824178 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 821967 1487 108347042
chr19 823478 824200 ZNF143 GTRD no Epithelial (MCF-7) 821967 1511 108347043
chr19 823488 824204 TCF7L2 GTRD no Colon (HCT116) 821967 1521 108347044
chr19 823488 824206 ZNF274 GTRD no Bone Marrow (K562) 821967 1521 108347045
chr19 823490 824108 ZNF274 GTRD no Bone Marrow (K562) 821967 1523 108347046
chr19 823493 824165 ZNF274 GTRD no Bone Marrow (K562) 821967 1526 108347047
chr19 823495 824271 TCF7L2 GTRD no Colon (HCT116) 821967 1528 108347048
chr19 823503 824079 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 821967 1536 108347049
chr19 823505 824116 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 821967 1538 108347050
chr19 823524 824513 TCF7L2 GTRD no Colon (HCT116) 821967 1557 108347051
chr19 823530 823889 ZNF274 GTRD no Bone Marrow (K562) 821967 1563 108347052
chr19 823531 824027 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 821967 1564 108347053
chr19 823533 824216 ZNF274 GTRD no Bone Marrow (K562) 821967 1566 108347054
chr19 823538 824045 ZNF274 GTRD no Bone Marrow (K562) 821967 1571 108347055
chr19 823538 824193 ZNF274 GTRD no Bone Marrow (K562) 821967 1571 108347056
chr19 823542 824058 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 821967 1575 108347057
chr19 823542 824146 ZNF274 GTRD no Bone Marrow (K562) 821967 1575 108347058
chr19 823545 824277 TCF7L2 GTRD no Colon (HCT116) 821967 1578 108347059
chr19 823546 823934 ZNF274 GTRD no Liver (HepG2) 821967 1579 108347060
chr19 823557 824081 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 821967 1590 108347061
chr19 823557 824184 ZNF143 GTRD no Epithelial (MCF-7) 821967 1590 108347062
chr19 823566 824218 ZNF274 GTRD no Bone Marrow (K562) 821967 1599 108347063
chr19 823579 823855 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 821967 1612 108347064
chr19 823584 823873 ZNF274 GTRD no Blood (GM12878) 821967 1617 108347065
chr19 823586 824056 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 821967 1619 108347066
chr19 823598 824144 ZNF274 GTRD no Bone Marrow (K562) 821967 1631 108347067
chr19 823614 824063 ZNF274 GTRD no Liver (HepG2) 821967 1647 108347068
chr19 823620 824116 ZNF274 GTRD no Liver (HepG2) 821967 1653 108347069
chr19 823621 824021 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 821967 1654 108347070
chr19 823621 824077 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 821967 1654 108347071
chr19 823622 824116 ZNF274 GTRD no Bone Marrow (K562) 821967 1655 108347072
chr19 823642 824012 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 821967 1675 108347073
chr19 823643 824162 ZNF274 GTRD no Bone Marrow (K562) 821967 1676 108347074
chr19 823645 824110 ZNF274 GTRD no Bone Marrow (K562) 821967 1678 108347075
chr19 823650 824040 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 821967 1683 108347076
chr19 823658 824034 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 821967 1691 108347077
chr19 823660 824044 EP300 UCSC Txn Factor no Conserved 821967 1693 108347078
chr19 823660 824044 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 821967 1693 108347079
chr19 823663 824082 ZNF143 GTRD no Epithelial (MCF-7) 821967 1696 108347080
chr19 823664 824075 ZNF274 GTRD no Liver (HepG2) 821967 1697 108347081
chr19 823668 824124 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 821967 1701 108347082
chr19 823670 823675 TFAP2A TRANSFAC yes 821967 1703 70777400
chr19 823670 823676 MZF1 JASPAR yes 821967 1703 70777401
chr19 823670 823680 SP1 JASPAR yes 821967 1703 70777402
chr19 823672 823678 MAZ TRANSFAC yes 821967 1705 70777403
chr19 823672 824189 ZNF274 GTRD no Bone Marrow (K562) 821967 1705 108347083
chr19 823676 823691 HNF4A JASPAR yes 821967 1709 70777404
chr19 823677 823692 HNF4G JASPAR yes 821967 1710 70777405
chr19 823677 824037 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 821967 1710 108347084
chr19 823678 823997 ZNF274 GTRD no Liver (HepG2) 821967 1711 108347085
chr19 823686 824050 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 821967 1719 108347086
chr19 823687 824311 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 821967 1720 108347087
chr19 823694 823969 ZNF274 GTRD no Liver (HepG2) 821967 1727 108347088
chr19 823696 824059 ZNF274 GTRD no Bone Marrow (K562) 821967 1729 108347089
chr19 823703 823717 PLAG1 JASPAR yes 821967 1736 70777406
chr19 823706 823982 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 821967 1739 108347090
chr19 823712 823723 NFKB1 JASPAR yes 821967 1745 70777407
chr19 823719 823999 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 821967 1752 108347091
chr19 823722 824109 ZNF274 GTRD no Cervix (HeLa-S3) 821967 1755 108347092
chr19 823728 823733 MYC TRANSFAC yes 821967 1761 70777408
chr19 823732 823747 SCRT1 JASPAR yes 821967 1765 70777409
chr19 823733 823737 ESR1 TRANSFAC yes 821967 1766 70777410
chr19 823736 823745 SNAI2 JASPAR yes 821967 1769 70777411
chr19 823736 823746 FIGLA JASPAR yes 821967 1769 70777412
chr19 823736 823746 TCF3 JASPAR yes 821967 1769 70777413
chr19 823736 823746 TCF4 JASPAR yes 821967 1769 70777414
chr19 823738 823747 ZEB1 JASPAR yes 821967 1771 70777415
chr19 823740 823745 SP1 TRANSFAC yes 821967 1773 70777416
chr19 823744 823748 H4TF2 TRANSFAC yes 821967 1777 70777417
chr19 823745 823968 ZNF274 GTRD no Bone Marrow (K562) 821967 1778 108347093
chr19 823753 824022 CEBPB UCSC Txn Factor no Conserved 821967 1786 108347094
chr19 823758 824022 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 821967 1791 108347095
chr19 823770 823776 MZF1 JASPAR yes 821967 1803 70777418
chr19 823778 823793 TFAP2C JASPAR yes 821967 1811 70777419
chr19 823779 823790 EBF1 JASPAR yes 821967 1812 70777420
chr19 823783 823931 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 821967 1816 108347096
chr19 823784 823794 SP1 JASPAR yes 821967 1817 70777421
chr19 823789 823801 HINFP JASPAR yes 821967 1822 70777422
chr19 823804 824048 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 821967 1837 108347097
chr19 823811 823895 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 821967 1844 108347098
chr19 823816 823827 FOXP2 JASPAR yes 821967 1849 70777423
chr19 823818 823826 FOXO3 JASPAR yes 821967 1851 70777424
chr19 823835 823845 SP1 JASPAR yes 821967 1868 70777425
chr19 823837 823842 SP1 TRANSFAC yes 821967 1870 70777426
chr19 823838 823843 SP1 TRANSFAC yes 821967 1871 70777427
chr19 823838 823844 SP1 TRANSFAC yes 821967 1871 70777428
chr19 823841 823846 SP1 TRANSFAC yes 821967 1874 70777429
chr19 823842 823862 ESR1 JASPAR yes 821967 1875 70777430
chr19 823879 823894 RUNX2 JASPAR yes 821967 1912 70777431
chr19 823880 823890 RUNX3 JASPAR yes 821967 1913 70777432
chr19 823880 823891 RUNX1 JASPAR yes 821967 1913 70777433
chr19 823888 823898 MSC JASPAR yes 821967 1921 70777434
chr19 823894 823905 EBF1 JASPAR yes 821967 1927 70777435
chr19 823899 823909 SP1 JASPAR yes 821967 1932 70777436
chr19 823899 823920 ZNF263 JASPAR yes 821967 1932 70777437
chr19 823902 823912 SP1 JASPAR yes 821967 1935 70777438
chr19 823905 823926 ZNF263 JASPAR yes 821967 1938 70777439
chr19 823908 823914 PEA3 TRANSFAC yes 821967 1941 70777440
chr19 823910 823924 IRF7 JASPAR yes 821967 1943 70777441
chr19 823912 823927 SOX21 JASPAR yes 821967 1945 70777442
chr19 823912 823928 SOX4 JASPAR yes 821967 1945 70777443
chr19 823918 823932 ONECUT1 JASPAR yes 821967 1951 70777444
chr19 823918 823932 ONECUT2 JASPAR yes 821967 1951 70777445
chr19 823918 823932 ONECUT3 JASPAR yes 821967 1951 70777446
chr19 823919 823929 PAX3 JASPAR yes 821967 1952 70777447
chr19 823919 823929 PAX7 JASPAR yes 821967 1952 70777448
chr19 823927 823942 HSF1 JASPAR yes 821967 1960 70777449
chr19 823940 823953 NR2F1 JASPAR yes 821967 1973 70777450
chr19 823941 823949 CREB1 JASPAR yes 821967 1974 70777451
chr19 823941 823956 NR2C2 JASPAR yes 821967 1974 70777452
chr19 823944 823948 ESR1 TRANSFAC yes 821967 1977 70777453
SNPs associated with LPPR3[ENSG00000129951.14], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr19 1272974 rs111547108 C G,T 451007 Esophagus 0.208968 5374128
chr19 1124748 rs111675643 G A 302781 Heart 0.381694 5372021
chr19 1451414 rs148981174 C T 629447 Breast 0.36398 5375683
chr19 485006 rs77460296 T C 327512 Ovary 0.349067 5364187
chr19 917097 rs116938043 C G 95130 Lung 0.272277 5369295
chr19 553140 rs35764810 G C 259378 Stomach 0.348394 5365046
Details of LPPR3[ENSG00000129951.14]
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Genomic Location chr19:812518-821967[-]
TSS 821967
Gene Name LPPR3
Ensembl ID ENSG00000129951.14
ENTREZID
Uniprot
Protein Name
Phospholipid phosphatase-related protein type 3
Expression levels of LPPR3[ENSG00000129951.14]
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