EnhancerDB
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  3. LEFTY2[ENSG00000143768.7]
Enhancers that regulate LEFTY2[ENSG00000143768.7]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 226033365 226039895 enh107441 226129189 89294
Blood (T-cell)
chr1 226048945 226053095 enh109389 226129189 76094
Stomach
chr1 226057225 226061375 enh79406 226129189 67814
Prostate (PC-3)
chr1 226063445 226067595 enh98611 226129189 61594
Uterus
chr1 226063760 226064118 vista5332 226129189 65071
VISTA
chr1 226072045 226076195 enh79407 226129189 52994
Prostate (PC-3)
chr1 226076945 226081575 enh79408 226129189 47614
Pancreas Prostate (PC-3) Liver (HepG2) Stomach
chr1 226082305 226089228 enh47300 226129189 39961
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Esophagus Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Stomach
chr1 226084943 226085104 vista5333 226129189 44085
VISTA
chr1 226086980 226087330 vista5334 226129189 41859
VISTA
chr1 226100855 226107415 enh79409 226129189 21774
Prostate (PC-3) Brain (SK-N-SH)
chr1 226117105 226123055 enh79410 226129189 6134
Bone Marrow (K562) Prostate (PC-3)
chr1 226151305 226156255 enh98612 226129189 22116
Uterus
chr1 226160165 226169975 enh951 226129189 30976
Prostate (RWPE1) Ovary Placenta Colon (HCT116) Blood (Karpas-422) Pancreas Spleen
chr1 226163769 226163979 vista5335 226129189 34580
VISTA
chr1 226171705 226177455 enh103217 226129189 42516
Peripheral Blood (MM.1S)
chr1 226187385 226199535 enh12727 226129189 58196
Bone Marrow (K562) Placenta
chr1 226187685 226188168 vista5336 226129189 58496
VISTA
chr1 226189681 226190319 vista5337 226129189 60492
VISTA
chr1 226190534 226190731 vista5338 226129189 61345
VISTA
chr1 226207185 226211335 enh50226 226129189 77996
Large Intestine
chr1 226213300 226224732 enh43161 226129189 84111
Bone Marrow (K562) Prostate (PC-3) Large Intestine Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Pancreas Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
chr1 226219862 226220210 vista5339 226129189 90673
VISTA
chr1 226221412 226221630 vista5340 226129189 92223
VISTA
chr1 226222205 226222589 vista5341 226129189 93016
VISTA
Transcript facotrs that regulate LEFTY2[ENSG00000143768.7]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 226120218 226124408 ZNF274 GTRD no Bone Marrow (K562) 226129189 4781 21385975
chr1 226121090 226124516 ZNF274 GTRD no Bone Marrow (K562) 226129189 4673 21385996
SNPs associated with LEFTY2[ENSG00000143768.7], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 226025288 rs10915885 G A 99010 Esophagus 0.16857 987904
chr1 226976075 rs115079631 G C 846886 Esophagus 0.283699 994697
chr1 226174958 rs111810998 T C 45769 Heart 0.241857 989093
chr1 226167998 rs397983053 CGG C 38809 Heart 0.303376 989020
chr1 226080154 rs78185604 C G,T 44144 Pancreas 3.31664e-09 988341
chr1 226154277 rs10458377 A G 25088 Ovary 0.0143726 988860
chr1 226971348 rs835658 A G 842159 Uterus 0.555795 994631
chr1 226116587 rs12746865 C A,T 7711 Lung 3.77789e-06 988611
chr1 227016194 rs397716321 A ATATT 887005 Stomach 0.369904 995193
chr1 225838653 rs77292205 C G 285645 Adrenal 0.238029 986492
Details of LEFTY2[ENSG00000143768.7]
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Genomic Location chr1:226124298-226129189[-]
TSS 226129189
Gene Name LEFTY2
Ensembl ID ENSG00000143768.7
ENTREZID 7044
Uniprot
A0A024R3P5
O00292
Protein Name
isoform CRA_a
Left-right determination factor 2
Left-right determination factor 2
Expression levels of LEFTY2[ENSG00000143768.7]
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