EnhancerDB
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Enhancers that regulate PLEKHA6[ENSG00000143850.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 204245511 204275535 enh12577 204346793 71258
Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 204254999 204255106 vista4675 204346793 91687
VISTA
chr1 204255998 204256379 vista4676 204346793 90414
VISTA
chr1 204261217 204266185 vista127 204346793 80608
VISTA
chr1 204274077 204274452 vista4677 204346793 72341
VISTA
chr1 204280925 204295275 enh12578 204346793 51518
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Neural Stem Cells (H9) Epithelial (MCF-7)
chr1 204289566 204289863 vista4678 204346793 56930
VISTA
chr1 204298485 204322980 enh12579 204346793 23813
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Ovary Esophagus Stomach Placenta Uterus Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
chr1 204317952 204318184 vista4679 204346793 28609
VISTA
chr1 204329788 204335087 enh12580 204346793 11706
Bone Marrow (K562) Liver (HepG2) Large Intestine Placenta Colon (HCT116) Pancreas (Panc1)
chr1 204330284 204330553 vista4680 204346793 16240
VISTA
chr1 204332438 204332553 vista4681 204346793 14240
VISTA
chr1 204349568 204349875 vista4682 204346793 2775
VISTA
chr1 204350385 204356353 enh87666 204346793 3592
Pancreas Cervix (HeLa-S3) Brain (SK-N-SH) Stomach
chr1 204357985 204362135 enh109374 204346793 11192
Stomach
chr1 204358316 204358342 vista4683 204346793 11523
VISTA
chr1 204363456 204363666 vista4684 204346793 16663
VISTA
chr1 204365519 204372255 enh12581 204346793 18726
Bone Marrow (K562) Cervix (HeLa-S3) Prostate (RWPE1) Large Intestine Blood (T-cell) Stomach Placenta Lung (PC-9) Pancreas Thymus Epithelial (MCF-7)
chr1 204381705 204391743 enh12582 204346793 34912
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Placenta Colon (HCT116) Pancreas Neural Stem Cells (H9)
chr1 204383374 204383435 vista4685 204346793 36581
VISTA
chr1 204386444 204387188 vista4686 204346793 39651
VISTA
chr1 204387566 204387645 vista4687 204346793 40773
VISTA
chr1 204388302 204388627 vista4688 204346793 41509
VISTA
chr1 204389721 204389989 vista4689 204346793 42928
VISTA
chr1 204395183 204395520 vista4690 204346793 48390
VISTA
chr1 204398565 204403135 enh98599 204346793 51772
Cervix (HeLa-S3) Uterus
chr1 204405628 204410234 enh89533 204346793 58835
Prostate (RWPE1)
chr1 204411085 204417893 enh12583 204346793 64292
Placenta Prostate (RWPE1)
chr1 204422279 204422591 vista4691 204346793 75486
VISTA
chr1 204423958 204424935 vista128 204346793 77165
VISTA
chr1 204428545 204433215 enh12584 204346793 81752
Placenta Heart
chr1 204430759 204431008 vista4692 204346793 83966
VISTA
chr1 204432329 204432499 vista4693 204346793 85536
VISTA
chr1 204434923 204435081 vista4694 204346793 88130
VISTA
chr1 204435094 204435487 vista4695 204346793 88301
VISTA
chr1 204440545 204458655 enh12585 204346793 93752
Cervix (HeLa-S3) Epithelial (MCF-7) Esophagus Liver Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Lung (PC-9) Pancreas Thymus Heart
Transcript facotrs that regulate PLEKHA6[ENSG00000143850.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 204349435 204349860 ZNF143 GTRD no Epithelial (MCF-7) 204346793 2642 107859883
chr1 204349458 204349842 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 204346793 2665 107859884
chr1 204349469 204349889 ZNF143 GTRD no Epithelial (MCF-7) 204346793 2676 107859885
chr1 204349513 204350029 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 204346793 2720 107859886
chr1 204349517 204350173 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 204346793 2724 107859887
chr1 204349562 204350132 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 204346793 2769 107859888
chr1 204349562 204350132 ZNF217 UCSC Txn Factor no Conserved 204346793 2769 107859889
chr1 204349582 204349588 NFIC JASPAR yes 204346793 2789 118437993
chr1 204349609 204350079 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 204346793 2816 107859890
chr1 204349609 204350127 GATA3 UCSC Txn Factor no Conserved 204346793 2816 107859891
chr1 204349622 204349630 MEIS3 JASPAR yes 204346793 2829 118437994
chr1 204349623 204349627 NFE TRANSFAC yes 204346793 2830 118437995
chr1 204349624 204349636 PKNOX2 JASPAR yes 204346793 2831 118437996
chr1 204349632 204350128 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 204346793 2839 107859892
chr1 204349640 204349655 SCRT1 JASPAR yes 204346793 2847 118437997
chr1 204349641 204349651 FIGLA JASPAR yes 204346793 2848 118437998
chr1 204349641 204349651 ID4 JASPAR yes 204346793 2848 118437999
chr1 204349641 204349651 MSC JASPAR yes 204346793 2848 118438000
chr1 204349641 204349651 TCF3 JASPAR yes 204346793 2848 118438001
chr1 204349641 204349651 TCF4 JASPAR yes 204346793 2848 118438002
chr1 204349642 204349651 SNAI2 JASPAR yes 204346793 2849 118438003
chr1 204349643 204349648 USF2 TRANSFAC yes 204346793 2850 118438004
chr1 204349643 204349657 PLAG1 JASPAR yes 204346793 2850 118438005
chr1 204349654 204349664 SREBF1 JASPAR yes 204346793 2861 118438006
chr1 204349654 204349664 SREBF2 JASPAR yes 204346793 2861 118438007
chr1 204349663 204349674 NFE2L2 JASPAR yes 204346793 2870 118438008
chr1 204349666 204349672 SOX10 JASPAR yes 204346793 2873 118438009
chr1 204349667 204349948 ESR1 UCSC Txn Factor no Conserved 204346793 2874 107859893
chr1 204349674 204349845 EP300 UCSC Txn Factor no Conserved 204346793 2881 107859894
chr1 204349679 204349688 SNAI2 JASPAR yes 204346793 2886 118438010
chr1 204349680 204349685 USF2 TRANSFAC yes 204346793 2887 118438011
chr1 204349683 204349698 RFX5 JASPAR yes 204346793 2890 118438012
chr1 204349698 204349704 YY1 JASPAR yes 204346793 2905 118438013
chr1 204349710 204349714 TEAD2 TRANSFAC yes 204346793 2917 118438014
chr1 204349710 204349715 TBP TRANSFAC yes 204346793 2917 118438015
chr1 204349727 204349737 NFIA JASPAR yes 204346793 2934 118438016
chr1 204349729 204349735 NFIC JASPAR yes 204346793 2936 118438017
chr1 204349732 204349744 PROX1 JASPAR yes 204346793 2939 118438018
chr1 204349734 204349749 TFAP2A JASPAR yes 204346793 2941 118438019
chr1 204349734 204349750 ZNF143 JASPAR yes 204346793 2941 118438020
chr1 204349737 204349749 TFAP2A JASPAR yes 204346793 2944 118438021
chr1 204349737 204349749 TFAP2B JASPAR yes 204346793 2944 118438022
chr1 204349737 204349749 TFAP2C JASPAR yes 204346793 2944 118438023
chr1 204349738 204349749 EBF1 JASPAR yes 204346793 2945 118438024
chr1 204349745 204349756 NFKB1 JASPAR yes 204346793 2952 118438025
chr1 204349746 204349761 HSF1 JASPAR yes 204346793 2953 118438026
chr1 204349747 204349760 HSF4 JASPAR yes 204346793 2954 118438027
chr1 204349794 204349803 THAP1 JASPAR yes 204346793 3001 118438028
chr1 204349797 204349801 LFA1 TRANSFAC yes 204346793 3004 118438029
chr1 204349797 204349809 NHLH1 JASPAR yes 204346793 3004 118438030
chr1 204349798 204349808 NHLH1 JASPAR yes 204346793 3005 118438031
chr1 204349820 204349824 LFA1 TRANSFAC yes 204346793 3027 118438032
chr1 204349831 204349848 ESR1 JASPAR yes 204346793 3038 118438033
chr1 204349831 204349849 ESR2 JASPAR yes 204346793 3038 118438034
chr1 204349832 204349847 ESR2 JASPAR yes 204346793 3039 118438035
chr1 204349842 204349852 NEUROG2 JASPAR yes 204346793 3049 118438036
chr1 204349848 204349852 YY1 TRANSFAC yes 204346793 3055 118438037
chr1 204349852 204349860 FOXO3 JASPAR yes 204346793 3059 118438038
chr1 204350641 204351247 ZBTB33 GTRD no Brain (SK-N-SH) 204346793 3848 21370420
chr1 204350686 204351257 ZBTB33 GTRD no Brain (SK-N-SH) 204346793 3893 21370421
chr1 204350811 204351392 ZBTB33 GTRD no Brain (SK-N-SH) 204346793 4018 21370422
chr1 204350824 204351333 ZBTB33 GTRD no Brain (SK-N-SH) 204346793 4031 21370423
SNPs associated with PLEKHA6[ENSG00000143850.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 204289393 rs4245729 G A 0 Esophagus 1.66546e-11 875123
chr1 204262031 rs5780225 CTGTTAG C 0 Esophagus 0.000407297 874811
chr1 204262031 rs5780225 CTGTTAG C 0 Spleen 5.50845e-10 874811
chr1 203887585 rs369203824 A AT 300394 Ovary 0.380653 872188
chr1 204250992 rs16853219 T G 0 Thyroid 4.07725e-05 874671
chr1 204254795 rs4617466 C T 0 Liver 0.223828 874723
chr1 204262031 rs5780225 CTGTTAG C 0 Lung 9.3401e-29 874811
chr1 204262031 rs5780225 CTGTTAG C 0 Adrenal 0.00102617 874811
Details of PLEKHA6[ENSG00000143850.8]
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Genomic Location chr1:204187979-204346793[-]
TSS 204346793
Gene Name PLEKHA6
Ensembl ID ENSG00000143850.8
ENTREZID 22874
Uniprot
Q9Y2H5
Protein Name
PLEKHA6 protein
Phosphoinositol 3-phosphate-binding protein 3
Pleckstrin homology domain-containing family A member 6
Truncated phosphoinositol 3-phosphate-binding protein 3
Expression levels of PLEKHA6[ENSG00000143850.8]
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