EnhancerDB
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Enhancers that regulate GGPS1[ENSG00000152904.7]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 235390754 235391125 vista5698 235490665 99540
VISTA
chr1 235398405 235402635 enh92167 235490665 88030
Liver (HepG2)
chr1 235411865 235416015 enh92168 235490665 74650
Liver (HepG2) Stomach
chr1 235419605 235423755 enh103233 235490665 66910
Peripheral Blood (MM.1S)
chr1 235427705 235431855 enh107444 235490665 58810
Blood (T-cell)
chr1 235432005 235446995 enh999 235490665 43670
Large Intestine Blood (T-cell) Astrocyte Blood (GM12878) Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Neural Stem Cells (H9) Thymus Stomach
chr1 235448657 235464435 enh12801 235490665 26230
Prostate (PC-3) Liver (HepG2) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Lung (PC-9) Pancreas Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
chr1 235460869 235461278 vista5699 235490665 29387
VISTA
chr1 235465925 235473035 enh1000 235490665 17630
Bone (Osteoblast) Blood (Karpas-422) Pancreas Blood (T-cell) Stomach
chr1 235468267 235468477 vista5700 235490665 22188
VISTA
chr1 235468552 235468724 vista5701 235490665 21941
VISTA
chr1 235474702 235486776 enh58233 235490665 3889
Skin (Keratinocyte) Liver (HepG2) Prostate (RWPE1) Neural Stem Cells (H9) Blood (T-cell) Stomach
chr1 235484403 235484795 vista5702 235490665 5870
VISTA
chr1 235486836 235487237 vista5703 235490665 3428
VISTA
chr1 235558909 235574575 enh12802 235490665 68244
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Pancreas (Panc1)
Transcript facotrs that regulate GGPS1[ENSG00000152904.7]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 235485651 235485669 MAFF JASPAR yes 235490665 4996 36365705
chr1 235485724 235485732 MGA JASPAR yes 235490665 4933 36365706
chr1 235485731 235485749 IRF2 JASPAR yes 235490665 4916 36365707
chr1 235485734 235485741 NKX3-1 JASPAR yes 235490665 4924 36365708
chr1 235485734 235485749 STAT2 JASPAR yes 235490665 4916 36365709
chr1 235485735 235485749 STAT1 JASPAR yes 235490665 4916 36365710
chr1 235485744 235485759 HSF1 JASPAR yes 235490665 4906 36365711
chr1 235485745 235485758 HSF1 JASPAR yes 235490665 4907 36365712
chr1 235485745 235485758 HSF2 JASPAR yes 235490665 4907 36365713
chr1 235485745 235485758 HSF4 JASPAR yes 235490665 4907 36365714
chr1 235485750 235485766 SOX8 JASPAR yes 235490665 4899 36365715
chr1 235485752 235485766 SPIC JASPAR yes 235490665 4899 36365716
chr1 235485771 235485775 YY1 TRANSFAC yes 235490665 4890 36365717
chr1 235485772 235485782 NFATC3 JASPAR yes 235490665 4883 36365718
chr1 235485773 235485780 NFATC2 JASPAR yes 235490665 4885 36365719
chr1 235485786 235485791 GATA2 JASPAR yes 235490665 4874 36365720
chr1 235485792 235485796 NFE TRANSFAC yes 235490665 4869 36365721
chr1 235485792 235485797 GATA1 TRANSFAC yes 235490665 4868 36365722
chr1 235485792 235485798 GATA3 JASPAR yes 235490665 4867 36365723
chr1 235485870 235485880 NFATC3 JASPAR yes 235490665 4785 36365724
chr1 235485892 235485911 CTCF JASPAR yes 235490665 4754 36365725
chr1 235485894 235485898 NFE TRANSFAC yes 235490665 4767 36365726
chr1 235485904 235485908 NFE TRANSFAC yes 235490665 4757 36365727
chr1 235485918 235485922 YY1 TRANSFAC yes 235490665 4743 36365728
chr1 235485918 235485933 STAT1 JASPAR yes 235490665 4732 36365729
chr1 235485919 235485927 FEV JASPAR yes 235490665 4738 36365730
chr1 235485931 235485935 YY1 TRANSFAC yes 235490665 4730 36365731
chr1 235485946 235485961 MEF2C JASPAR yes 235490665 4704 36365732
chr1 235485947 235485958 HOXC13 JASPAR yes 235490665 4707 36365733
chr1 235485947 235485958 HOXD12 JASPAR yes 235490665 4707 36365734
chr1 235485947 235485962 MEF2A JASPAR yes 235490665 4703 36365735
chr1 235485948 235485958 HOXC10 JASPAR yes 235490665 4707 36365736
chr1 235485949 235485959 MEF2A JASPAR yes 235490665 4706 36365737
chr1 235485965 235485986 IRF1 JASPAR yes 235490665 4679 36365738
chr1 235485969 235485983 IRF7 JASPAR yes 235490665 4682 36365739
chr1 235485969 235485984 IRF9 JASPAR yes 235490665 4681 36365740
chr1 235485973 235485987 POU4F1 JASPAR yes 235490665 4678 36365741
chr1 235485973 235485989 POU4F3 JASPAR yes 235490665 4676 36365742
chr1 235485977 235485991 FOXF2 JASPAR yes 235490665 4674 36365743
chr1 235485979 235485983 YY1 TRANSFAC yes 235490665 4682 36365744
chr1 235486015 235486029 RORA JASPAR yes 235490665 4636 36365745
chr1 235486018 235486028 RORA JASPAR yes 235490665 4637 36365746
chr1 235486023 235486027 ESR1 TRANSFAC yes 235490665 4638 36365747
chr1 235486023 235486034 USF1 JASPAR yes 235490665 4631 36365748
chr1 235486028 235486039 NFE2 JASPAR yes 235490665 4626 36365749
chr1 235486085 235486099 POU4F1 JASPAR yes 235490665 4566 36365750
chr1 235486085 235486101 POU4F2 JASPAR yes 235490665 4564 36365751
chr1 235486085 235486101 POU4F3 JASPAR yes 235490665 4564 36365752
chr1 235486088 235486099 NFE2 JASPAR yes 235490665 4566 36365753
chr1 235486089 235486098 JDP2 JASPAR yes 235490665 4567 36365754
chr1 235486096 235486102 TCF4 TRANSFAC yes 235490665 4563 36365755
chr1 235486101 235486114 SMAD2 JASPAR yes 235490665 4551 36365756
chr1 235486101 235486122 ZNF263 JASPAR yes 235490665 4543 36365757
chr1 235486103 235486124 ZNF263 JASPAR yes 235490665 4541 36365758
chr1 235486107 235486128 ZNF263 JASPAR yes 235490665 4537 36365759
chr1 235486113 235486134 ZNF263 JASPAR yes 235490665 4531 36365760
chr1 235486114 235486119 ETS2 TRANSFAC yes 235490665 4546 36365761
chr1 235486114 235486135 ZNF263 JASPAR yes 235490665 4530 36365762
chr1 235486116 235486126 SP1 JASPAR yes 235490665 4539 36365763
chr1 235486116 235486137 ZNF263 JASPAR yes 235490665 4528 36365764
chr1 235486119 235486129 MZF1 JASPAR yes 235490665 4536 36365765
chr1 235486124 235486129 ETS2 TRANSFAC yes 235490665 4536 36365766
chr1 235486126 235486147 ZNF263 JASPAR yes 235490665 4518 36365767
chr1 235486127 235486132 ETS2 TRANSFAC yes 235490665 4533 36365768
chr1 235486129 235486150 ZNF263 JASPAR yes 235490665 4515 36365769
chr1 235486164 235486170 ZNF354C JASPAR yes 235490665 4495 36365770
chr1 235486166 235486171 GATA2 JASPAR yes 235490665 4494 36365771
chr1 235486180 235486186 SOX10 JASPAR yes 235490665 4479 36365772
chr1 235486182 235486203 ZNF263 JASPAR yes 235490665 4462 36365773
chr1 235486185 235486206 ZNF263 JASPAR yes 235490665 4459 36365774
chr1 235486188 235486209 ZNF263 JASPAR yes 235490665 4456 36365775
chr1 235486189 235486210 ZNF263 JASPAR yes 235490665 4455 36365776
chr1 235486192 235486202 MZF1 JASPAR yes 235490665 4463 36365777
chr1 235486195 235486216 ZNF263 JASPAR yes 235490665 4449 36365778
chr1 235486230 235486234 LFA1 TRANSFAC yes 235490665 4431 36365779
chr1 235486232 235486242 HOXA13 JASPAR yes 235490665 4423 36365780
chr1 235486233 235486237 YY1 TRANSFAC yes 235490665 4428 36365781
chr1 235486236 235486242 TBP TRANSFAC yes 235490665 4423 36365782
chr1 235486237 235486251 SPI1 JASPAR yes 235490665 4414 36365783
chr1 235486252 235486262 CUX1 JASPAR yes 235490665 4403 36365784
chr1 235486252 235486262 CUX2 JASPAR yes 235490665 4403 36365785
chr1 235486252 235486264 PBX1 JASPAR yes 235490665 4401 36365786
chr1 235486259 235486275 POU4F3 JASPAR yes 235490665 4390 36365787
chr1 235486261 235486265 YY1 TRANSFAC yes 235490665 4400 36365788
chr1 235486261 235486275 POU4F1 JASPAR yes 235490665 4390 36365789
chr1 235486264 235486268 YY1 TRANSFAC yes 235490665 4397 36365790
chr1 235486264 235486277 POU2F2 JASPAR yes 235490665 4388 36365791
chr1 235486270 235486281 USF2 JASPAR yes 235490665 4384 36365792
chr1 235486278 235486293 NFYB JASPAR yes 235490665 4372 36365793
chr1 235486280 235486293 DUXA JASPAR yes 235490665 4372 36365794
chr1 235486280 235486296 NFYA JASPAR yes 235490665 4369 36365795
chr1 235486281 235486292 DUX4 JASPAR yes 235490665 4373 36365796
chr1 235486285 235486289 H1TF2 TRANSFAC yes 235490665 4376 36365797
chr1 235486285 235486289 NFE TRANSFAC yes 235490665 4376 36365798
chr1 235486285 235486289 SRF TRANSFAC yes 235490665 4376 36365799
chr1 235486309 235486322 ZBTB18 JASPAR yes 235490665 4343 36365800
chr1 235486312 235486327 HSF1 JASPAR yes 235490665 4338 36365801
chr1 235486313 235486326 HSF1 JASPAR yes 235490665 4339 36365802
chr1 235486313 235486326 HSF2 JASPAR yes 235490665 4339 36365803
chr1 235486313 235486326 HSF4 JASPAR yes 235490665 4339 36365804
chr1 235486314 235486324 NFATC3 JASPAR yes 235490665 4341 36365805
chr1 235486316 235486323 NFATC2 JASPAR yes 235490665 4342 36365806
chr1 235486319 235486332 DUXA JASPAR yes 235490665 4333 36365807
chr1 235486320 235486331 DUX4 JASPAR yes 235490665 4334 36365808
chr1 235486333 235486339 ZNF354C JASPAR yes 235490665 4326 36365809
chr1 235486337 235486352 MEF2C JASPAR yes 235490665 4313 36365810
chr1 235486338 235486353 MEF2A JASPAR yes 235490665 4312 36365811
chr1 235486339 235486351 MEF2A JASPAR yes 235490665 4314 36365812
chr1 235486339 235486351 MEF2B JASPAR yes 235490665 4314 36365813
chr1 235486339 235486351 MEF2D JASPAR yes 235490665 4314 36365814
chr1 235486340 235486350 MEF2A JASPAR yes 235490665 4315 36365815
chr1 235486345 235486349 TEAD2 TRANSFAC yes 235490665 4316 36365816
chr1 235486347 235486350 MYB TRANSFAC yes 235490665 4315 36365817
chr1 235486349 235486370 IRF1 JASPAR yes 235490665 4295 36365818
chr1 235486351 235486372 IRF1 JASPAR yes 235490665 4293 36365819
chr1 235486352 235486373 IRF1 JASPAR yes 235490665 4292 36365820
chr1 235486353 235486368 FOXP1 JASPAR yes 235490665 4297 36365821
chr1 235486354 235486369 FOXP1 JASPAR yes 235490665 4296 36365822
chr1 235486355 235486370 FOXP1 JASPAR yes 235490665 4295 36365823
chr1 235486356 235486371 FOXP1 JASPAR yes 235490665 4294 36365824
chr1 235486357 235486372 FOXP1 JASPAR yes 235490665 4293 36365825
chr1 235486358 235486373 FOXP1 JASPAR yes 235490665 4292 36365826
chr1 235486359 235486374 FOXP1 JASPAR yes 235490665 4291 36365827
chr1 235486363 235486378 FOXP1 JASPAR yes 235490665 4287 36365828
chr1 235486369 235486380 STAT3 JASPAR yes 235490665 4285 36365829
chr1 235486379 235486390 NFKB1 JASPAR yes 235490665 4275 36365830
chr1 235486388 235486396 MEIS3 JASPAR yes 235490665 4269 36365831
chr1 235486389 235486393 NFE TRANSFAC yes 235490665 4272 36365832
chr1 235486413 235486425 YY1 JASPAR yes 235490665 4240 36365833
chr1 235486416 235486422 YY1 JASPAR yes 235490665 4243 36365834
chr1 235486426 235486447 ZNF263 JASPAR yes 235490665 4218 36365835
chr1 235486493 235486513 TP63 JASPAR yes 235490665 4152 36365836
chr1 235486494 235486512 TP53 JASPAR yes 235490665 4153 36365837
chr1 235486494 235486512 TP73 JASPAR yes 235490665 4153 36365838
chr1 235486498 235486519 REST JASPAR yes 235490665 4146 36365839
chr1 235486504 235486514 SP1 JASPAR yes 235490665 4151 36365840
chr1 235486507 235486516 HIC2 JASPAR yes 235490665 4149 36365841
chr1 235486516 235486527 PROP1 JASPAR yes 235490665 4138 36365842
chr1 235486518 235486533 FOXP1 JASPAR yes 235490665 4132 36365843
chr1 235486574 235486589 NR2C2 JASPAR yes 235490665 4076 36365844
chr1 235486594 235486600 ZNF354C JASPAR yes 235490665 4065 36365845
chr1 235486631 235486651 TP63 JASPAR yes 235490665 4014 36365846
chr1 235486634 235486645 NFE2 JASPAR yes 235490665 4020 36365847
chr1 235486635 235486646 FOSL2 JASPAR yes 235490665 4019 36365848
chr1 235486644 235486658 E2F7 JASPAR yes 235490665 4007 36365849
chr1 235486645 235486654 HIC2 JASPAR yes 235490665 4011 36365850
chr1 235486645 235486657 E2F8 JASPAR yes 235490665 4008 36365851
chr1 235486649 235486657 E2F1 JASPAR yes 235490665 4008 36365852
chr1 235486658 235486662 TEAD2 TRANSFAC yes 235490665 4003 36365853
chr1 235486698 235486703 GATA2 JASPAR yes 235490665 3962 36365854
chr1 235486716 235486720 YY1 TRANSFAC yes 235490665 3945 36365855
chr1 235486719 235486729 ALX3 JASPAR yes 235490665 3936 36365856
chr1 235486719 235486729 GSX2 JASPAR yes 235490665 3936 36365857
chr1 235486719 235486729 MIXL1 JASPAR yes 235490665 3936 36365858
chr1 235486719 235486729 MNX1 JASPAR yes 235490665 3936 36365859
chr1 235486720 235486728 ISX JASPAR yes 235490665 3937 36365860
chr1 235486720 235486728 LHX9 JASPAR yes 235490665 3937 36365861
chr1 235486720 235486728 LMX1B JASPAR yes 235490665 3937 36365862
chr1 235486720 235486728 PRRX1 JASPAR yes 235490665 3937 36365863
chr1 235486720 235486728 RAX2 JASPAR yes 235490665 3937 36365864
chr1 235486720 235486728 SHOX JASPAR yes 235490665 3937 36365865
chr1 235486720 235486728 UNCX JASPAR yes 235490665 3937 36365866
chr1 235486722 235486737 HNF1A JASPAR yes 235490665 3928 36365867
chr1 235486723 235486728 MYB TRANSFAC yes 235490665 3937 36365868
chr1 235486735 235486749 CREB3 JASPAR yes 235490665 3916 36365869
chr1 235486735 235486749 CREB3L1 JASPAR yes 235490665 3916 36365870
chr1 235486736 235486748 TEF JASPAR yes 235490665 3917 36365871
chr1 235486738 235486746 GMEB2 JASPAR yes 235490665 3919 36365872
chr1 235486741 235486752 HOXA10 JASPAR yes 235490665 3913 36365873
chr1 235486742 235486751 CDX1 JASPAR yes 235490665 3914 36365874
chr1 235486742 235486752 HOXA13 JASPAR yes 235490665 3913 36365875
chr1 235486742 235486752 HOXD13 JASPAR yes 235490665 3913 36365876
chr1 235486759 235486762 MYB TRANSFAC yes 235490665 3903 36365877
chr1 235486842 235486863 LUN1 TRANSFAC yes 235490665 3802 118488269
chr1 235486859 235486873 PLAG1 JASPAR yes 235490665 3792 118488270
chr1 235486866 235486871 SP1 TRANSFAC yes 235490665 3794 118488271
chr1 235486867 235486872 SP1 TRANSFAC yes 235490665 3793 118488272
chr1 235486867 235486876 THAP1 JASPAR yes 235490665 3789 118488273
chr1 235486870 235486874 LFA1 TRANSFAC yes 235490665 3791 118488274
chr1 235486875 235486886 USF1 JASPAR yes 235490665 3779 118488275
chr1 235486875 235486886 USF2 JASPAR yes 235490665 3779 118488276
chr1 235486876 235486886 SREBF2 JASPAR yes 235490665 3779 118488277
chr1 235486878 235486883 USF2 TRANSFAC yes 235490665 3782 118488278
chr1 235486881 235486894 NR2F1 JASPAR yes 235490665 3771 118488279
chr1 235486882 235486890 CREB1 JASPAR yes 235490665 3775 118488280
chr1 235486883 235486901 RARA JASPAR yes 235490665 3764 118488281
chr1 235486885 235486889 ESR1 TRANSFAC yes 235490665 3776 118488282
chr1 235486893 235486913 ESR1 JASPAR yes 235490665 3752 118488283
chr1 235486897 235486915 NR3C1 JASPAR yes 235490665 3750 118488284
chr1 235486910 235486914 H1TF2 TRANSFAC yes 235490665 3751 118488285
chr1 235486910 235486914 NFE TRANSFAC yes 235490665 3751 118488286
chr1 235486910 235486914 SRF TRANSFAC yes 235490665 3751 118488287
chr1 235486955 235486975 TP63 JASPAR yes 235490665 3690 118488288
chr1 235486956 235486974 TP53 JASPAR yes 235490665 3691 118488289
chr1 235486956 235486974 TP63 JASPAR yes 235490665 3691 118488290
chr1 235486956 235486974 TP73 JASPAR yes 235490665 3691 118488291
chr1 235486958 235486973 TP53 JASPAR yes 235490665 3692 118488292
chr1 235486974 235486978 TEAD2 TRANSFAC yes 235490665 3687 118488293
chr1 235486984 235486996 HNF1B JASPAR yes 235490665 3669 118488294
chr1 235487031 235487048 ESR1 JASPAR yes 235490665 3617 118488295
chr1 235487073 235487077 LFA1 TRANSFAC yes 235490665 3588 118488296
chr1 235487095 235487116 IRF1 JASPAR yes 235490665 3549 118488297
chr1 235487096 235487111 FOXP1 JASPAR yes 235490665 3554 118488298
chr1 235487098 235487104 TBP TRANSFAC yes 235490665 3561 118488299
chr1 235487099 235487114 PRDM1 JASPAR yes 235490665 3551 118488300
chr1 235487099 235487114 STAT2 JASPAR yes 235490665 3551 118488301
chr1 235487101 235487122 IRF1 JASPAR yes 235490665 3543 118488302
chr1 235487104 235487118 IRF7 JASPAR yes 235490665 3547 118488303
chr1 235487105 235487120 PRDM1 JASPAR yes 235490665 3545 118488304
chr1 235487106 235487118 IRF1 JASPAR yes 235490665 3547 118488305
chr1 235487109 235487129 ESR1 JASPAR yes 235490665 3536 118488306
chr1 235487113 235487131 ESR2 JASPAR yes 235490665 3534 118488307
chr1 235487121 235487133 HLF JASPAR yes 235490665 3532 118488308
chr1 235487126 235487137 HOXA10 JASPAR yes 235490665 3528 118488309
chr1 235487127 235487136 CDX1 JASPAR yes 235490665 3529 118488310
chr1 235487127 235487137 HOXA13 JASPAR yes 235490665 3528 118488311
chr1 235487127 235487137 HOXB13 JASPAR yes 235490665 3528 118488312
chr1 235487127 235487137 HOXD13 JASPAR yes 235490665 3528 118488313
chr1 235487127 235487142 MEF2C JASPAR yes 235490665 3523 118488314
chr1 235487128 235487143 MEF2A JASPAR yes 235490665 3522 118488315
chr1 235487129 235487141 MEF2A JASPAR yes 235490665 3524 118488316
chr1 235487130 235487140 MEF2A JASPAR yes 235490665 3525 118488317
chr1 235487148 235487160 FOXC2 JASPAR yes 235490665 3505 118488318
chr1 235487149 235487160 FOXB1 JASPAR yes 235490665 3505 118488319
chr1 235487149 235487160 FOXC1 JASPAR yes 235490665 3505 118488320
chr1 235487150 235487154 YY1 TRANSFAC yes 235490665 3511 118488321
chr1 235487179 235487191 SRF JASPAR yes 235490665 3474 118488322
chr1 235487182 235487186 TEAD2 TRANSFAC yes 235490665 3479 118488323
chr1 235487189 235487207 MAFF JASPAR yes 235490665 3458 118488324
chr1 235487191 235487202 NRL JASPAR yes 235490665 3463 118488325
chr1 235487191 235487206 MAFK JASPAR yes 235490665 3459 118488326
chr1 235487200 235487214 IRF7 JASPAR yes 235490665 3451 118488327
chr1 235487205 235487209 YY1 TRANSFAC yes 235490665 3456 118488328
chr1 235487210 235487214 YY1 TRANSFAC yes 235490665 3451 118488329
chr1 235487212 235487224 FOXI1 JASPAR yes 235490665 3441 118488330
chr1 235487212 235487227 FOXP1 JASPAR yes 235490665 3438 118488331
chr1 235487215 235487219 YY1 TRANSFAC yes 235490665 3446 118488332
chr1 235487216 235487237 IRF1 JASPAR yes 235490665 3428 118488333
chr1 235487218 235487233 STAT2 JASPAR yes 235490665 3432 118488334
chr1 235487221 235487236 FOXP1 JASPAR yes 235490665 3429 118488335
chr1 235487222 235487237 FOXP1 JASPAR yes 235490665 3428 118488336
SNPs associated with GGPS1[ENSG00000152904.7], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 234620576 rs144199543 C T 870089 Esophagus 0.288953 1042199
chr1 234931575 rs2786010 C T 559090 Esophagus 0.183306 1046274
chr1 236162592 rs4660141 A G 654745 Pancreas 0.245745 1054110
chr1 236056689 rs143876081 G T 548842 Uterus 0.0156056 1052868
chr1 234844262 rs112441777 C T 646403 Liver 0.378022 1045298
chr1 234637789 rs16843362 T C 852876 Stomach 0.392648 1042492
Details of GGPS1[ENSG00000152904.7]
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Genomic Location chr1:235490665-235507847[+]
TSS 235490665
Gene Name GGPS1
Ensembl ID ENSG00000152904.7
ENTREZID 9453
Uniprot
O95749
A0A024R3W4
Protein Name
isoform CRA_a
Geranylgeranyl diphosphate synthase 1
Geranylgeranyl pyrophosphate synthase
Expression levels of GGPS1[ENSG00000152904.7]
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