EnhancerDB
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Enhancers that regulate RPN1[ENSG00000163902.7]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr3 128298525 128313135 enh20917 128399918 86783
Cervix (HeLa-S3) Muscle (A673) Placenta Lung (PC-9) Pancreas Pancreas (Panc1) Blood (T-cell)
chr3 128304030 128304455 vista42364 128399918 95463
VISTA
chr3 128310952 128311168 vista42365 128399918 88750
VISTA
chr3 128312973 128313336 vista42366 128399918 86582
VISTA
chr3 128314045 128319029 enh45499 128399918 80889
Muscle (Myoblast) Muscle (A673) Muscle (Myotube)
chr3 128317710 128318049 vista42367 128399918 81869
VISTA
chr3 128321805 128329435 enh54340 128399918 70483
Liver (HepG2) Uterus Large Intestine
chr3 128325000 128325227 vista42368 128399918 74691
VISTA
chr3 128327283 128327483 vista42369 128399918 72435
VISTA
chr3 128329972 128330294 vista42370 128399918 69624
VISTA
chr3 128332689 128338780 enh7523 128399918 61138
Pancreas (Panc1) Colon (HCT116) Uterus Blood (Karpas-422)
chr3 128335495 128335812 vista42371 128399918 64106
VISTA
chr3 128336521 128336831 vista42372 128399918 63087
VISTA
chr3 128337505 128337705 vista42373 128399918 62213
VISTA
chr3 128338287 128338590 vista42374 128399918 61328
VISTA
chr3 128366732 128367045 vista42375 128399918 32873
VISTA
chr3 128382285 128387155 enh20918 128399918 12763
Placenta
chr3 128390113 128390338 vista42376 128399918 9580
VISTA
chr3 128391476 128396044 enh61084 128399918 3874
Blood (OCI-LY7)
chr3 128414279 128422915 enh100093 128399918 14361
Uterus Bone (Osteoblast) Stomach
chr3 128417695 128417825 vista42377 128399918 17777
VISTA
chr3 128423085 128431975 enh20919 128399918 23167
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Esophagus Placenta Lung (PC-9) Epithelial (MCF-7)
chr3 128432065 128436235 enh48742 128399918 32147
Thymus Blood (T-cell)
chr3 128446542 128446927 vista42378 128399918 46624
VISTA
chr3 128446744 128452495 enh65749 128399918 46826
Blood (GM12878) Heart
chr3 128453477 128457805 enh59234 128399918 53559
Skin (Keratinocyte) Prostate (RWPE1) Stomach
chr3 128475165 128489555 enh20920 128399918 75247
Bone Marrow (K562) Brain (SK-N-MC) Large Intestine Esophagus Placenta Thyroid Lung (PC-9) Blood (T-cell) Stomach
chr3 128475272 128475670 vista42379 128399918 75354
VISTA
chr3 128492768 128510615 enh7524 128399918 92850
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript facotrs that regulate RPN1[ENSG00000163902.7]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr3 128394914 128394928 GATA2 JASPAR yes 128399918 4990 5617593
chr3 128394916 128394923 GATA3 TRANSFAC yes 128399918 4995 5617594
chr3 128394916 128394924 GATA5 JASPAR yes 128399918 4994 5617595
chr3 128394919 128394922 MYB TRANSFAC yes 128399918 4996 5617596
chr3 128394942 128394946 NFE TRANSFAC yes 128399918 4972 5617597
chr3 128394952 128394966 GLIS3 JASPAR yes 128399918 4952 5617598
chr3 128394960 128394971 PHOX2A JASPAR yes 128399918 4947 5617599
chr3 128394960 128394971 PROP1 JASPAR yes 128399918 4947 5617600
chr3 128394962 128394972 POU6F2 JASPAR yes 128399918 4946 5617601
chr3 128394963 128394973 ALX3 JASPAR yes 128399918 4945 5617602
chr3 128394963 128394973 MEOX2 JASPAR yes 128399918 4945 5617603
chr3 128394963 128394973 MNX1 JASPAR yes 128399918 4945 5617604
chr3 128394963 128394975 MEF2A JASPAR yes 128399918 4943 5617605
chr3 128394963 128394975 MEF2B JASPAR yes 128399918 4943 5617606
chr3 128394963 128394975 MEF2D JASPAR yes 128399918 4943 5617607
chr3 128394964 128394972 LBX1 JASPAR yes 128399918 4946 5617608
chr3 128394964 128394972 PDX1 JASPAR yes 128399918 4946 5617609
chr3 128394964 128394972 VAX1 JASPAR yes 128399918 4946 5617610
chr3 128394964 128394972 VAX2 JASPAR yes 128399918 4946 5617611
chr3 128394964 128394972 VSX1 JASPAR yes 128399918 4946 5617612
chr3 128394964 128394972 VSX2 JASPAR yes 128399918 4946 5617613
chr3 128394964 128394974 MEF2A JASPAR yes 128399918 4944 5617614
chr3 128394964 128394978 POU1F1 JASPAR yes 128399918 4940 5617615
chr3 128394965 128394977 POU3F2 JASPAR yes 128399918 4941 5617616
chr3 128394969 128394973 TEAD2 TRANSFAC yes 128399918 4945 5617617
chr3 128394990 128395000 ID4 JASPAR yes 128399918 4918 5617618
chr3 128394990 128395000 TCF3 JASPAR yes 128399918 4918 5617619
chr3 128394990 128395000 TCF4 JASPAR yes 128399918 4918 5617620
chr3 128394992 128394997 USF2 TRANSFAC yes 128399918 4921 5617621
chr3 128395016 128395019 MYB TRANSFAC yes 128399918 4899 5617622
chr3 128395020 128395024 YY1 TRANSFAC yes 128399918 4894 5617623
chr3 128395033 128395047 GATA2 JASPAR yes 128399918 4871 5617624
chr3 128395033 128395048 FOXP1 JASPAR yes 128399918 4870 5617625
chr3 128395034 128395043 SRY JASPAR yes 128399918 4875 5617626
chr3 128395034 128395045 FOXP2 JASPAR yes 128399918 4873 5617627
chr3 128395034 128395048 FOXF2 JASPAR yes 128399918 4870 5617628
chr3 128395035 128395043 FOXG1 JASPAR yes 128399918 4875 5617629
chr3 128395035 128395043 FOXO3 JASPAR yes 128399918 4875 5617630
chr3 128395037 128395045 GATA3 JASPAR yes 128399918 4873 5617631
chr3 128395045 128395051 LEF1 TRANSFAC yes 128399918 4867 5617632
chr3 128395045 128395051 SOX10 JASPAR yes 128399918 4867 5617633
chr3 128395049 128395061 YY1 JASPAR yes 128399918 4857 5617634
chr3 128395050 128395053 MYB TRANSFAC yes 128399918 4865 5617635
chr3 128395054 128395058 YY1 TRANSFAC yes 128399918 4860 5617636
chr3 128395056 128395071 FOXP1 JASPAR yes 128399918 4847 5617637
chr3 128395058 128395073 FOXP1 JASPAR yes 128399918 4845 5617638
chr3 128395074 128395089 FOXP1 JASPAR yes 128399918 4829 5617639
chr3 128395100 128395104 YY1 TRANSFAC yes 128399918 4814 5617640
chr3 128395102 128395122 PPARG JASPAR yes 128399918 4796 5617641
chr3 128395108 128395129 ZNF263 JASPAR yes 128399918 4789 5617642
chr3 128395110 128395116 SP1 TRANSFAC yes 128399918 4802 5617643
chr3 128395110 128395120 SP1 JASPAR yes 128399918 4798 5617644
chr3 128395117 128395125 EHF JASPAR yes 128399918 4793 5617645
chr3 128395133 128395137 TEAD2 TRANSFAC yes 128399918 4781 5617646
chr3 128395133 128395138 TBP TRANSFAC yes 128399918 4780 5617647
chr3 128395133 128395139 TFIID TRANSFAC yes 128399918 4779 5617648
chr3 128395136 128395149 DUXA JASPAR yes 128399918 4769 5617649
chr3 128395137 128395148 DUX4 JASPAR yes 128399918 4770 5617650
chr3 128395150 128395160 SP1 JASPAR yes 128399918 4758 5617651
chr3 128395152 128395160 EHF JASPAR yes 128399918 4758 5617652
chr3 128395160 128395165 SP1 TRANSFAC yes 128399918 4753 5617653
chr3 128395250 128395253 MYB TRANSFAC yes 128399918 4665 5617654
chr3 128395260 128395264 LFA1 TRANSFAC yes 128399918 4654 5617655
chr3 128395270 128395285 RUNX2 JASPAR yes 128399918 4633 5617656
chr3 128395285 128395296 ESRRA JASPAR yes 128399918 4622 5617657
chr3 128395285 128395296 ESRRB JASPAR yes 128399918 4622 5617658
chr3 128395287 128395295 NR4A2 JASPAR yes 128399918 4623 5617659
chr3 128395289 128395293 ESR1 TRANSFAC yes 128399918 4625 5617660
chr3 128395290 128395300 SREBF1 JASPAR yes 128399918 4618 5617661
chr3 128395290 128395300 SREBF2 JASPAR yes 128399918 4618 5617662
chr3 128395311 128395330 PAX5 JASPAR yes 128399918 4588 5617663
chr3 128395313 128395317 LFA1 TRANSFAC yes 128399918 4601 5617664
chr3 128395331 128395335 NFE TRANSFAC yes 128399918 4583 5617665
chr3 128395333 128395348 MEF2C JASPAR yes 128399918 4570 5617666
chr3 128395334 128395349 MEF2A JASPAR yes 128399918 4569 5617667
chr3 128395337 128395351 FOXF2 JASPAR yes 128399918 4567 5617668
chr3 128395337 128395351 ONECUT2 JASPAR yes 128399918 4567 5617669
chr3 128395337 128395351 ONECUT3 JASPAR yes 128399918 4567 5617670
chr3 128395337 128395352 FOXP1 JASPAR yes 128399918 4566 5617671
chr3 128395338 128395353 FOXA1 JASPAR yes 128399918 4565 5617672
chr3 128395339 128395350 FOXB1 JASPAR yes 128399918 4568 5617673
chr3 128395339 128395350 FOXC1 JASPAR yes 128399918 4568 5617674
chr3 128395339 128395351 FOXC2 JASPAR yes 128399918 4567 5617675
chr3 128395340 128395352 FOXI1 JASPAR yes 128399918 4566 5617676
chr3 128395341 128395355 FOXF2 JASPAR yes 128399918 4563 5617677
chr3 128395341 128395356 FOXP1 JASPAR yes 128399918 4562 5617678
chr3 128395342 128395353 FOXA1 JASPAR yes 128399918 4565 5617679
chr3 128395342 128395357 FOXA1 JASPAR yes 128399918 4561 5617680
chr3 128395343 128395354 FOXB1 JASPAR yes 128399918 4564 5617681
chr3 128395343 128395354 FOXC1 JASPAR yes 128399918 4564 5617682
chr3 128395343 128395355 FOXC2 JASPAR yes 128399918 4563 5617683
chr3 128395344 128395355 FOXP2 JASPAR yes 128399918 4563 5617684
chr3 128395344 128395356 FOXI1 JASPAR yes 128399918 4562 5617685
chr3 128395346 128395354 FOXG1 JASPAR yes 128399918 4564 5617686
chr3 128395346 128395354 FOXO3 JASPAR yes 128399918 4564 5617687
chr3 128395347 128395359 FOXC2 JASPAR yes 128399918 4559 5617688
chr3 128395348 128395360 FOXI1 JASPAR yes 128399918 4558 5617689
chr3 128395349 128395363 ONECUT3 JASPAR yes 128399918 4555 5617690
chr3 128395349 128395364 FOXP1 JASPAR yes 128399918 4554 5617691
chr3 128395351 128395363 FOXC2 JASPAR yes 128399918 4555 5617692
chr3 128395352 128395364 FOXI1 JASPAR yes 128399918 4554 5617693
chr3 128395353 128395367 FOXF2 JASPAR yes 128399918 4551 5617694
chr3 128395354 128395365 FOXA1 JASPAR yes 128399918 4553 5617695
chr3 128395354 128395369 FOXA1 JASPAR yes 128399918 4549 5617696
chr3 128395355 128395366 FOXB1 JASPAR yes 128399918 4552 5617697
chr3 128395355 128395366 FOXC1 JASPAR yes 128399918 4552 5617698
chr3 128395355 128395367 FOXC2 JASPAR yes 128399918 4551 5617699
chr3 128395356 128395368 FOXI1 JASPAR yes 128399918 4550 5617700
chr3 128395358 128395366 FOXG1 JASPAR yes 128399918 4552 5617701
chr3 128395363 128395367 YY1 TRANSFAC yes 128399918 4551 5617702
chr3 128395367 128395373 TBP TRANSFAC yes 128399918 4545 5617703
chr3 128395374 128395389 TFAP2C JASPAR yes 128399918 4529 5617704
chr3 128395375 128395389 GLIS3 JASPAR yes 128399918 4529 5617705
chr3 128395376 128395391 TFAP2A JASPAR yes 128399918 4527 5617706
chr3 128395377 128395388 EBF1 JASPAR yes 128399918 4530 5617707
chr3 128395383 128395396 NFKB2 JASPAR yes 128399918 4522 5617708
chr3 128395405 128395410 GATA2 JASPAR yes 128399918 4508 5617709
chr3 128395410 128395415 GATA2 JASPAR yes 128399918 4503 5617710
chr3 128395443 128395449 NFIC JASPAR yes 128399918 4469 5617711
chr3 128395455 128395470 LEF1 JASPAR yes 128399918 4448 5617712
chr3 128395456 128395470 TCF7L2 JASPAR yes 128399918 4448 5617713
chr3 128395459 128395465 LEF1 TRANSFAC yes 128399918 4453 5617714
chr3 128395459 128395465 TCF4 TRANSFAC yes 128399918 4453 5617715
chr3 128395488 128395509 ZNF263 JASPAR yes 128399918 4409 5617716
chr3 128395511 128395526 RFX5 JASPAR yes 128399918 4392 5617717
chr3 128395518 128395530 TAL1 JASPAR yes 128399918 4388 5617718
chr3 128395519 128395531 NHLH1 JASPAR yes 128399918 4387 5617719
chr3 128395520 128395530 TFAP4 JASPAR yes 128399918 4388 5617720
chr3 128395528 128395532 LFA1 TRANSFAC yes 128399918 4386 5617721
chr3 128395536 128395551 TFAP2C JASPAR yes 128399918 4367 5617722
chr3 128395539 128395550 EBF1 JASPAR yes 128399918 4368 5617723
chr3 128395559 128395564 MYC TRANSFAC yes 128399918 4354 5617724
chr3 128395585 128395600 TFAP2C JASPAR yes 128399918 4318 5617725
chr3 128395587 128395599 TFAP2A JASPAR yes 128399918 4319 5617726
chr3 128395587 128395599 TFAP2B JASPAR yes 128399918 4319 5617727
chr3 128395587 128395599 TFAP2C JASPAR yes 128399918 4319 5617728
chr3 128395587 128395602 TFAP2A JASPAR yes 128399918 4316 5617729
chr3 128395587 128395602 TFAP2C JASPAR yes 128399918 4316 5617730
chr3 128395614 128395626 TFAP2A JASPAR yes 128399918 4292 5617731
chr3 128395614 128395626 TFAP2B JASPAR yes 128399918 4292 5617732
chr3 128395614 128395626 TFAP2C JASPAR yes 128399918 4292 5617733
chr3 128395621 128395625 LFA1 TRANSFAC yes 128399918 4293 5617734
chr3 128395678 128395693 ZIC3 JASPAR yes 128399918 4225 5617735
chr3 128395678 128395693 ZIC4 JASPAR yes 128399918 4225 5617736
chr3 128395685 128395699 PLAG1 JASPAR yes 128399918 4219 5617737
chr3 128395688 128395692 LFA1 TRANSFAC yes 128399918 4226 5617738
chr3 128395707 128395727 TP53 JASPAR yes 128399918 4191 5617739
chr3 128395736 128395740 H1TF2 TRANSFAC yes 128399918 4178 5617740
chr3 128395736 128395740 NFE TRANSFAC yes 128399918 4178 5617741
chr3 128395736 128395740 SRF TRANSFAC yes 128399918 4178 5617742
chr3 128395768 128395779 E2F4 JASPAR yes 128399918 4139 5617743
chr3 128395768 128395779 E2F6 JASPAR yes 128399918 4139 5617744
chr3 128395769 128395780 E2F1 JASPAR yes 128399918 4138 5617745
chr3 128395770 128395789 PAX5 JASPAR yes 128399918 4129 5617746
chr3 128395771 128395788 RXRA JASPAR yes 128399918 4130 5617747
chr3 128395772 128395779 SP1 TRANSFAC yes 128399918 4139 5617748
chr3 128395773 128395778 SP1 TRANSFAC yes 128399918 4140 5617749
chr3 128395773 128395779 SP1 TRANSFAC yes 128399918 4139 5617750
chr3 128395782 128395796 RXRB JASPAR yes 128399918 4122 5617751
chr3 128395782 128395796 RXRG JASPAR yes 128399918 4122 5617752
chr3 128395787 128395791 YY1 TRANSFAC yes 128399918 4127 5617753
chr3 128395790 128395809 CTCF JASPAR yes 128399918 4109 5617754
chr3 128395797 128395807 FIGLA JASPAR yes 128399918 4111 5617755
chr3 128395797 128395807 TCF3 JASPAR yes 128399918 4111 5617756
chr3 128395799 128395804 USF2 TRANSFAC yes 128399918 4114 5617757
chr3 128395803 128395815 INSM1 JASPAR yes 128399918 4103 5617758
chr3 128395809 128395813 LFA1 TRANSFAC yes 128399918 4105 5617759
chr3 128395821 128395833 IRF1 JASPAR yes 128399918 4085 5617760
chr3 128395831 128395841 ID4 JASPAR yes 128399918 4077 5617761
chr3 128395847 128395852 TFAP2A TRANSFAC yes 128399918 4066 5617762
chr3 128395847 128395853 MZF1 JASPAR yes 128399918 4065 5617763
chr3 128395849 128395854 ETS2 TRANSFAC yes 128399918 4064 5617764
chr3 128395852 128395857 ETS2 TRANSFAC yes 128399918 4061 5617765
chr3 128395852 128395860 EHF JASPAR yes 128399918 4058 5617766
chr3 128395861 128395867 MZF1 JASPAR yes 128399918 4051 5617767
chr3 128395876 128395887 CEBPA JASPAR yes 128399918 4031 5617768
chr3 128395905 128395920 MEF2C JASPAR yes 128399918 3998 5617769
chr3 128395909 128395915 TBP TRANSFAC yes 128399918 4003 5617770
chr3 128395925 128395931 HiNF-A TRANSFAC yes 128399918 3987 5617771
chr3 128395968 128395988 TP53 JASPAR yes 128399918 3930 5617772
chr3 128395985 128395996 NFE2 JASPAR yes 128399918 3922 5617773
chr3 128395988 128395998 POU6F2 JASPAR yes 128399918 3920 5617774
chr3 128395992 128395996 YY1 TRANSFAC yes 128399918 3922 5617775
SNPs associated with RPN1[ENSG00000163902.7], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr3 128383097 rs2001703 A G 0 Esophagus 2.16019e-12 7021640
chr3 128383539 rs2335234 T G 0 Esophagus 4.03542e-05 7021647
chr3 128416440 rs528300276 TTTC T 16522 Esophagus 0.00181971 7021808
chr3 128383406 rs35535737 G A 0 Heart 0.00624354 7021643
chr3 128131844 rs77843217 G T 206973 Spleen 0.394582 7019520
chr3 129116419 rs17325066 T C 716501 Uterus 0.133928 7025929
chr3 128420557 rs6439142 G A 20639 Thyroid 3.50176e-07 7021858
chr3 128399623 rs9813845 G C 0 Lung 1.5349e-08 7021772
chr3 128998117 rs62266887 G C 598199 Stomach 0.0284417 7024832
Details of RPN1[ENSG00000163902.7]
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Genomic Location chr3:128338817-128399918[-]
TSS 128399918
Gene Name RPN1
Ensembl ID ENSG00000163902.7
ENTREZID 6184
Uniprot
P04843
Protein Name
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
Expression levels of RPN1[ENSG00000163902.7]
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