EnhancerDB
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  3. GLIS1[ENSG00000174332.3]
Enhancers that regulate GLIS1[ENSG00000174332.3]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 54103085 54107315 enh26710 54199877 92562
Astrocyte Prostate (PC-3) Peripheral Blood (MM.1S)
chr1 54117309 54125068 enh26711 54199877 74809
Brain (SK-N-SH) Brain (SK-N-MC) Astrocyte Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Muscle (Myotube)
chr1 54127029 54127330 vista1621 54199877 72547
VISTA
chr1 54133158 54138140 enh115356 54199877 61737
Brain (SK-N-SH)
chr1 54141310 54141636 vista1622 54199877 58241
VISTA
chr1 54142285 54153175 enh26712 54199877 46702
Brain (SK-N-SH) Large Intestine Astrocyte Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas (Panc1) Uterus Stomach
chr1 54144768 54145090 vista1623 54199877 54787
VISTA
chr1 54150852 54151742 vista1624 54199877 48135
VISTA
chr1 54157465 54166575 enh26713 54199877 33302
Astrocyte Prostate (PC-3) Bone (Osteoblast)
chr1 54163740 54163856 vista1625 54199877 36021
VISTA
chr1 54167485 54174264 enh66924 54199877 25613
Neural Stem Cells (H9)
chr1 54168078 54168275 vista1626 54199877 31602
VISTA
chr1 54186706 54187027 vista1627 54199877 12850
VISTA
chr1 54188934 54193336 enh66925 54199877 6541
Neural Stem Cells (H9)
chr1 54200761 54200844 vista1628 54199877 884
VISTA
chr1 54237165 54237506 vista1629 54199877 37288
VISTA
chr1 54245402 54251039 enh102376 54199877 45525
Bone (Osteoblast)
chr1 54260217 54260562 vista1630 54199877 60340
VISTA
chr1 54261078 54261111 vista1631 54199877 61201
VISTA
chr1 54276863 54277244 vista1632 54199877 76986
VISTA
chr1 54286238 54286401 vista1633 54199877 86361
VISTA
chr1 54286705 54293215 enh364 54199877 86828
Blood (Karpas-422) Lung (PC-9)
Transcript facotrs that regulate GLIS1[ENSG00000174332.3]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 54198672 54201939 ZNF274 GTRD no Bone Marrow (K562) 54199877 1205 107804276
chr1 54198699 54202002 ZNF274 GTRD no Bone Marrow (K562) 54199877 1178 107804277
chr1 54198724 54201296 ZNF274 GTRD no Bone Marrow (K562) 54199877 1153 107804278
chr1 54198760 54201499 ZNF274 GTRD no Liver (HepG2) 54199877 1117 107804279
chr1 54198821 54201280 ZNF143 GTRD no Epithelial (MCF-7) 54199877 1056 107804280
chr1 54198831 54201373 ZNF274 GTRD no Bone Marrow (K562) 54199877 1046 107804281
chr1 54198853 54200794 ZNF274 GTRD no Liver (HepG2) 54199877 917 107804282
chr1 54198865 54201719 ZNF274 GTRD no Bone Marrow (K562) 54199877 1012 107804283
chr1 54198878 54200942 ZNF274 GTRD no Bone Marrow (K562) 54199877 999 107804284
chr1 54198913 54200772 ZNF274 GTRD no Bone Marrow (K562) 54199877 895 107804285
chr1 54198919 54201685 ZNF274 GTRD no Blood (GM12878) 54199877 958 107804286
chr1 54199012 54200829 ZNF274 GTRD no Liver (HepG2) 54199877 865 107804287
chr1 54199012 54201026 ZNF274 GTRD no Liver (HepG2) 54199877 865 107804288
chr1 54199012 54201485 ZNF274 GTRD no Cervix (HeLa-S3) 54199877 865 107804289
chr1 54199036 54201435 ZNF274 GTRD no Blood (GM12878) 54199877 841 107804290
chr1 54199054 54201652 ZNF274 GTRD no Bone Marrow (K562) 54199877 823 107804291
chr1 54199084 54201314 ZNF274 GTRD no Cervix (HeLa-S3) 54199877 793 107804292
chr1 54199086 54200970 ZNF274 GTRD no Blood (GM12878) 54199877 791 107804293
chr1 54199112 54201147 ZNF274 GTRD no Bone Marrow (K562) 54199877 765 107804294
chr1 54199127 54201141 ZNF274 GTRD no Blood (GM12878) 54199877 750 107804295
chr1 54199165 54200903 ZNF274 GTRD no Bone Marrow (K562) 54199877 712 107804296
chr1 54199178 54201231 ZNF143 GTRD no Epithelial (MCF-7) 54199877 699 107804297
chr1 54199182 54200980 ZNF143 GTRD no Epithelial (MCF-7) 54199877 695 107804298
chr1 54199198 54201172 ZNF274 GTRD no Blood (GM12878) 54199877 679 107804299
chr1 54199243 54200834 ZNF274 GTRD no Bone Marrow (K562) 54199877 634 107804300
chr1 54199252 54200796 ZNF274 GTRD no Bone Marrow (K562) 54199877 625 107804301
chr1 54199252 54201165 ZNF143 GTRD no Epithelial (MCF-7) 54199877 625 107804302
chr1 54199253 54201013 ZNF274 GTRD no Blood (GM12878) 54199877 624 107804303
chr1 54199292 54200941 ZNF274 GTRD no Liver (HepG2) 54199877 585 107804304
chr1 54199303 54201214 ZNF274 GTRD no Blood (GM12878) 54199877 574 107804305
chr1 54199318 54201497 ZNF274 GTRD no Blood (GM12878) 54199877 559 107804306
chr1 54199331 54201085 ZNF274 GTRD no Bone Marrow (K562) 54199877 546 107804307
chr1 54199356 54200957 ZNF274 GTRD no Bone Marrow (K562) 54199877 521 107804308
chr1 54199359 54201002 ZNF274 GTRD no Bone Marrow (K562) 54199877 518 107804309
chr1 54199366 54201201 ZNF274 GTRD no Bone Marrow (K562) 54199877 511 107804310
chr1 54199376 54201009 ZNF274 GTRD no Cervix (HeLa-S3) 54199877 501 107804311
chr1 54199393 54200816 ZBTB33 GTRD no Lung (A549) 54199877 484 107804312
chr1 54199398 54200986 ZNF274 GTRD no Bone Marrow (K562) 54199877 479 107804313
chr1 54199404 54200811 ZNF274 GTRD no Bone Marrow (K562) 54199877 473 107804314
chr1 54199428 54201015 ZNF274 GTRD no Bone Marrow (K562) 54199877 449 107804315
chr1 54199440 54200977 ZNF274 GTRD no Bone Marrow (K562) 54199877 437 107804316
chr1 54199454 54200808 ZNF274 GTRD no Bone Marrow (K562) 54199877 423 107804317
chr1 54199458 54200889 TCF7L2 GTRD no Colon (HCT116) 54199877 419 107804318
chr1 54199479 54201014 ZBTB33 GTRD no Lung (A549) 54199877 398 107804319
chr1 54199483 54200821 ZNF274 GTRD no Bone Marrow (K562) 54199877 394 107804320
chr1 54199499 54200834 ZBTB33 GTRD no Lung (A549) 54199877 378 107804321
chr1 54199503 54200903 TCF7L2 GTRD no Colon (HCT116) 54199877 374 107804322
chr1 54199508 54200782 ZNF274 GTRD no Bone Marrow (K562) 54199877 369 107804323
chr1 54199532 54201024 TCF7L2 GTRD no Colon (HCT116) 54199877 345 107804324
chr1 54199540 54200986 ZNF274 GTRD no Blood (GM12878) 54199877 337 107804325
chr1 54199540 54201097 ZNF274 GTRD no Bone Marrow (K562) 54199877 337 107804326
chr1 54199582 54201026 ZNF274 GTRD no Bone Marrow (K562) 54199877 295 107804327
chr1 54199597 54200932 ZNF274 GTRD no Bone Marrow (K562) 54199877 280 107804328
chr1 54199607 54200896 ZNF274 GTRD no Bone Marrow (K562) 54199877 270 107804329
chr1 54199611 54201012 ZNF274 GTRD no Liver (HepG2) 54199877 266 107804330
chr1 54199613 54200814 ZNF274 GTRD no Blood (GM12878) 54199877 264 107804331
chr1 54199619 54200848 TCF7L2 GTRD no Colon (HCT116) 54199877 258 107804332
chr1 54199658 54200784 ZNF274 GTRD no Bone Marrow (K562) 54199877 219 107804333
chr1 54199663 54201499 ZNF274 GTRD no Blood (GM12878) 54199877 214 107804334
chr1 54199665 54200793 ZNF274 GTRD no Bone Marrow (K562) 54199877 212 107804335
chr1 54199687 54200773 ZBTB33 GTRD no Lung (A549) 54199877 190 107804336
chr1 54199729 54200908 ZNF274 GTRD no Cervix (HeLa-S3) 54199877 148 107804337
chr1 54199733 54201087 TCF7L2 GTRD no Colon (HCT116) 54199877 144 107804338
chr1 54199739 54200938 ZNF274 GTRD no Blood (GM12878) 54199877 138 107804339
chr1 54199748 54201093 ZNF274 GTRD no Blood (GM12878) 54199877 129 107804340
chr1 54199824 54201082 ZBTB33 GTRD no Brain (SK-N-SH) 54199877 53 107804341
chr1 54199869 54200762 ZNF274 GTRD no Blood (GM12878) 54199877 8 107804342
chr1 54199905 54200957 ZBTB33 GTRD no Brain (SK-N-SH) 54199877 28 107804343
chr1 54200098 54200826 ZNF274 GTRD no Bone Marrow (K562) 54199877 221 107804344
chr1 54200766 54200777 E2F1 JASPAR yes 54199877 889 118291656
chr1 54200767 54200772 SP1 TRANSFAC yes 54199877 890 118291657
chr1 54200782 54200796 RXRB JASPAR yes 54199877 905 118291658
chr1 54200782 54200796 RXRG JASPAR yes 54199877 905 118291659
chr1 54200789 54200801 INSM1 JASPAR yes 54199877 912 118291660
chr1 54200789 54200806 RARA JASPAR yes 54199877 912 118291661
chr1 54200809 54200813 NFE TRANSFAC yes 54199877 932 118291662
chr1 54200820 54200835 RFX5 JASPAR yes 54199877 943 118291663
chr1 54200822 54200826 ESR1 TRANSFAC yes 54199877 945 118291664
chr1 54200828 54200841 ZBTB18 JASPAR yes 54199877 951 118291665
chr1 54200829 54200833 LFA1 TRANSFAC yes 54199877 952 118291666
chr1 54200829 54200841 NHLH1 JASPAR yes 54199877 952 118291667
chr1 54200830 54200840 NHLH1 JASPAR yes 54199877 953 118291668
SNPs associated with GLIS1[ENSG00000174332.3], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 54018849 rs35089544 C CA 0 Esophagus 0.128881 315300
chr1 54204448 rs761489 A C 4571 Heart 0.00621711 316617
chr1 54755091 rs6697414 C A 555214 Spleen 0.00146942 318964
chr1 53978119 rs6588480 A G 0 Uterus 0.078799 315049
chr1 54152593 rs138593437 A C 0 Stomach 0.254372 316250
chr1 53519508 rs59798079 C T 452402 Adrenal 0.316553 311998
Details of GLIS1[ENSG00000174332.3]
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Genomic Location chr1:53971910-54199877[-]
TSS 54199877
Gene Name GLIS1
Ensembl ID ENSG00000174332.3
ENTREZID 148979
Uniprot
A0A0D9SEX9
Q8NBF1
Protein Name
Zinc finger protein GLIS1
Expression levels of GLIS1[ENSG00000174332.3]
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