EnhancerDB
  1. Home
  2. Gene
  3. C1orf172[ENSG00000175707.7]
Enhancers that regulate C1orf172[ENSG00000175707.7]
Back to top
Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 27191386 27191927 vista893 27286897 94970
VISTA
chr1 27192234 27201210 enh168 27286897 85687
Skin (Keratinocyte) Prostate (PC-3) Esophagus Lung Colon (HCT116) Blood (Karpas-422) Lung (PC-9)
chr1 27206205 27210355 enh92038 27286897 76542
Liver (HepG2)
chr1 27231968 27236534 enh49692 27286897 50363
Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Large Intestine Colon (HCT116) Lung (PC-9) Pancreas Epithelial (MCF-7)
chr1 27244420 27244792 vista894 27286897 42105
VISTA
chr1 27262605 27267375 enh92039 27286897 19522
Spleen Liver (HepG2)
chr1 27289282 27289295 vista895 27286897 2385
VISTA
chr1 27294965 27301275 enh61818 27286897 8068
Esophagus Liver (HepG2) Stomach
chr1 27301385 27305535 enh109300 27286897 14488
Stomach
chr1 27317684 27338176 enh11657 27286897 30787
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Bone (Osteoblast) Stomach Placenta Colon (HCT116) Thyroid Lung (PC-9) Neural Stem Cells (H9) Heart
chr1 27321452 27321840 vista896 27286897 34555
VISTA
chr1 27336678 27336931 vista897 27286897 49781
VISTA
chr1 27337570 27337809 vista898 27286897 50673
VISTA
chr1 27346200 27350474 enh90661 27286897 59303
Bone Marrow (K562) Bone (Osteoblast)
chr1 27351515 27365695 enh11658 27286897 64618
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Muscle (A673) Placenta Colon (HCT116) Uterus Spleen Neural Stem Cells (H9) Stomach
chr1 27353661 27353962 vista899 27286897 66764
VISTA
chr1 27368866 27378392 enh11659 27286897 81969
Brain (SK-N-MC) Prostate (RWPE1) Muscle (A673) Placenta Colon (HCT116) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell)
chr1 27381992 27389660 enh42914 27286897 95095
Muscle (Myotube) Neural Stem Cells (H9) Stomach
chr1 27383957 27384315 vista900 27286897 97060
VISTA
Transcript facotrs that regulate C1orf172[ENSG00000175707.7]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 27289100 27289426 TCF7L2 GTRD no Colon (HCT116) 27286897 2203 107802561
SNPs associated with C1orf172[ENSG00000175707.7], confirmed by eQTL
Back to top
Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 27322152 rs1890052 G A 35255 Esophagus 0.19687 183157
chr1 27297312 rs3010108 G A 10415 Esophagus 7.51308e-11 183004
chr1 27901368 rs78542455 C T 614471 Heart 0.0272784 187054
chr1 28191585 rs398102600 C CCA 904688 Pancreas 0.274515 188672
chr1 26847384 rs141970240 G A 428669 Breast 0.139058 180701
chr1 26640492 rs4370757 C T 635561 Ovary 0.357146 179394
chr1 27979460 rs78578543 T C 692563 Liver 0.467339 187764
chr1 27123140 rs76388446 G T 152913 Stomach 0.130683 182179
Details of C1orf172[ENSG00000175707.7]
Back to top
Genomic Location chr1:27276053-27286897[-]
TSS 27286897
Gene Name C1orf172
Ensembl ID ENSG00000175707.7
ENTREZID
Uniprot
Protein Name
Keratinocyte differentiation factor 1
Expression levels of C1orf172[ENSG00000175707.7]
Back to top