EnhancerDB
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  3. RANBP3[ENSG00000031823.10]
Enhancers that regulate RANBP3[ENSG00000031823.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 5873385 5885719 enh52839 5978153 92434
Liver (HepG2) Large Intestine Esophagus Heart Stomach
chr19 5880679 5880918 vista28401 5978153 97235
VISTA
chr19 5890213 5894363 enh65169 5978153 83790
Heart
chr19 5898990 5899031 vista28402 5978153 79122
VISTA
chr19 5940860 5941142 vista28403 5978153 37011
VISTA
chr19 5941853 5970935 enh4982 5978153 7218
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr19 5953003 5953253 vista28404 5978153 24900
VISTA
chr19 5966194 5966581 vista28405 5978153 11572
VISTA
chr19 5968077 5968307 vista28406 5978153 9846
VISTA
chr19 5968660 5968756 vista28407 5978153 9397
VISTA
chr19 5983365 5992702 enh32880 5978153 5212
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Thymus Stomach
chr19 5989815 5989915 vista28408 5978153 11662
VISTA
chr19 6016985 6022895 enh48158 5978153 38832
Pancreas Thymus Stomach Epithelial (MCF-7)
chr19 6023211 6023679 vista28409 5978153 45058
VISTA
chr19 6028225 6033776 enh17884 5978153 50072
Astrocyte Placenta Bone (Osteoblast) Lung (PC-9)
chr19 6055365 6071655 enh17885 5978153 77212
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr19 6056849 6057757 vista28410 5978153 78696
VISTA
chr19 6058680 6058810 vista28411 5978153 80527
VISTA
chr19 6060958 6061480 vista28412 5978153 82805
VISTA
chr19 6062045 6062746 vista28413 5978153 83892
VISTA
chr19 6063576 6063994 vista28414 5978153 85423
VISTA
chr19 6066698 6067208 vista28415 5978153 88545
VISTA
chr19 6067299 6067617 vista28416 5978153 89146
VISTA
chr19 6071128 6071397 vista28417 5978153 92975
VISTA
chr19 6076501 6076965 vista28418 5978153 98348
VISTA
Transcript facotrs that regulate RANBP3[ENSG00000031823.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 5982859 5984385 ZNF274 GTRD no Bone Marrow (K562) 5978153 4706 21843891
chr19 5982919 5984315 ZNF274 GTRD no Bone Marrow (K562) 5978153 4766 21843892
chr19 5982932 5984018 ZNF274 GTRD no Bone Marrow (K562) 5978153 4779 21843893
chr19 5982944 5986376 ZNF274 GTRD no Bone Marrow (K562) 5978153 4791 21843894
chr19 5982984 5983849 ZNF274 GTRD no Bone Marrow (K562) 5978153 4831 21843895
chr19 5982989 5983944 TEF1 GTRD no Bone (Osteoblast) 5978153 4836 21843896
chr19 5983104 5984321 ZNF274 GTRD no Bone Marrow (K562) 5978153 4951 21843897
SNPs associated with RANBP3[ENSG00000031823.10], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr19 6629422 rs28781354 C T 651269 Heart 0.160356 5416128
chr19 6267827 rs1560694 A G 289674 Stomach 0.370087 5413824
Details of RANBP3[ENSG00000031823.10]
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Genomic Location chr19:5916150-5978153[-]
TSS 5978153
Gene Name RANBP3
Ensembl ID ENSG00000031823.10
ENTREZID 8498
Uniprot
Q53GE1
Q9H6Z4
B7Z7F3
Protein Name
isoform CRA_c
RAN binding protein 3
Ran-binding protein 3
Ranbp3 protein
Expression levels of RANBP3[ENSG00000031823.10]
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