EnhancerDB
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Enhancers that regulate RHO[ENSG00000163914.4]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr3 129161185 129168235 enh70840 129247483 79248
Pancreas Neural Stem Cells (H9)
chr3 129167159 129167354 vista42405 129247483 80129
VISTA
chr3 129180710 129180864 vista42406 129247483 66619
VISTA
chr3 129189985 129194135 enh93205 129247483 53348
Liver (HepG2)
chr3 129198965 129207495 enh20928 129247483 39988
Prostate (RWPE1) Astrocyte Placenta Uterus Neural Stem Cells (H9)
chr3 129204579 129204997 vista42407 129247483 42486
VISTA
chr3 129208027 129224155 enh65753 129247483 23328
Liver (HepG2) Bone (Osteoblast) Epithelial (MCF-7) Heart
chr3 129244298 129244494 vista42408 129247483 2989
VISTA
chr3 129245035 129245230 vista42409 129247483 2253
VISTA
chr3 129245456 129245718 vista42410 129247483 1765
VISTA
chr3 129269905 129274055 enh100094 129247483 22422
Uterus
chr3 129276413 129283857 enh102717 129247483 28930
Bone (Osteoblast)
chr3 129293005 129297155 enh107955 129247483 45522
Blood (T-cell)
chr3 129295610 129296083 vista42411 129247483 48127
VISTA
chr3 129307647 129324343 enh20929 129247483 60164
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
chr3 129311648 129311919 vista42412 129247483 64165
VISTA
chr3 129313710 129313984 vista42413 129247483 66227
VISTA
chr3 129315034 129315445 vista42414 129247483 67551
VISTA
chr3 129315678 129315871 vista42415 129247483 68195
VISTA
chr3 129318465 129318690 vista42416 129247483 70982
VISTA
chr3 129322103 129322311 vista42417 129247483 74620
VISTA
chr3 129325490 129349015 enh7530 129247483 78007
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Placenta Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Uterus Heart
chr3 129335456 129335900 vista42418 129247483 87973
VISTA
chr3 129337923 129338085 vista42419 129247483 90440
VISTA
chr3 129343419 129343754 vista42420 129247483 95936
VISTA
chr3 129344975 129345039 vista42421 129247483 97492
VISTA
chr3 129346331 129346490 vista42422 129247483 98848
VISTA
Transcript facotrs that regulate RHO[ENSG00000163914.4]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr3 129244307 129244326 REST JASPAR yes 129247483 3157 71051165
chr3 129244307 129244328 ZNF263 JASPAR yes 129247483 3155 71051166
chr3 129244308 129244322 PLAG1 JASPAR yes 129247483 3161 71051167
chr3 129244321 129244326 ETS2 TRANSFAC yes 129247483 3157 71051168
chr3 129244323 129244334 FLI1 JASPAR yes 129247483 3149 71051169
chr3 129244324 129244329 ETS2 TRANSFAC yes 129247483 3154 71051170
chr3 129244334 129244350 RFX3 JASPAR yes 129247483 3133 71051171
chr3 129244334 129244350 RFX4 JASPAR yes 129247483 3133 71051172
chr3 129244334 129244350 RFX5 JASPAR yes 129247483 3133 71051173
chr3 129244342 129244353 JUNB JASPAR yes 129247483 3130 71051174
chr3 129244343 129244354 FOSL1 JASPAR yes 129247483 3129 71051175
chr3 129244344 129244351 JUN TRANSFAC yes 129247483 3132 71051176
chr3 129244393 129244399 NFE2 TRANSFAC yes 129247483 3084 71051177
chr3 129244394 129244406 TFAP2A JASPAR yes 129247483 3077 71051178
chr3 129244394 129244408 GLIS2 JASPAR yes 129247483 3075 71051179
chr3 129244400 129244420 ESR1 JASPAR yes 129247483 3063 71051180
chr3 129244404 129244422 ESR1 JASPAR yes 129247483 3061 71051181
chr3 129244405 129244420 ESR2 JASPAR yes 129247483 3063 71051182
chr3 129244408 129244422 JUN JASPAR yes 129247483 3061 71051183
chr3 129244411 129244422 FOSL2 JASPAR yes 129247483 3061 71051184
chr3 129244411 129244422 JUNB JASPAR yes 129247483 3061 71051185
chr3 129244412 129244423 FOS JASPAR yes 129247483 3060 71051186
chr3 129244412 129244423 FOSL1 JASPAR yes 129247483 3060 71051187
chr3 129244412 129244423 JUND JASPAR yes 129247483 3060 71051188
chr3 129244413 129244420 JUN TRANSFAC yes 129247483 3063 71051189
chr3 129244413 129244427 JUN JASPAR yes 129247483 3056 71051190
chr3 129244414 129244425 BATF JASPAR yes 129247483 3058 71051191
chr3 129244426 129244436 REL JASPAR yes 129247483 3047 71051192
chr3 129244426 129244437 NFKB1 JASPAR yes 129247483 3046 71051193
chr3 129244435 129244439 YY1 TRANSFAC yes 129247483 3044 71051194
chr3 129244458 129244469 BATF JASPAR yes 129247483 3014 71051195
chr3 129244463 129244467 YY1 TRANSFAC yes 129247483 3016 71051196
chr3 129244464 129244484 TBX19 JASPAR yes 129247483 2999 71051197
chr3 129244473 129244483 SREBF2 JASPAR yes 129247483 3000 71051198
chr3 129244473 129244483 TBX21 JASPAR yes 129247483 3000 71051199
chr3 129244473 129244484 TBX20 JASPAR yes 129247483 2999 71051200
chr3 129244473 129244484 TBX2 JASPAR yes 129247483 2999 71051201
chr3 129244473 129244486 EOMES JASPAR yes 129247483 2997 71051202
chr3 129244474 129244482 MGA JASPAR yes 129247483 3001 71051203
chr3 129244474 129244484 TBR1 JASPAR yes 129247483 2999 71051204
chr3 129245041 129245062 IRF1 JASPAR yes 129247483 2421 71051205
chr3 129245043 129245058 PRDM1 JASPAR yes 129247483 2425 71051206
chr3 129245043 129245058 STAT2 JASPAR yes 129247483 2425 71051207
chr3 129245046 129245061 FOXP1 JASPAR yes 129247483 2422 71051208
chr3 129245047 129245062 FOXP1 JASPAR yes 129247483 2421 71051209
chr3 129245077 129245095 ESR2 JASPAR yes 129247483 2388 71051210
chr3 129245077 129245097 PPARG JASPAR yes 129247483 2386 71051211
chr3 129245078 129245096 ESR1 JASPAR yes 129247483 2387 71051212
chr3 129245079 129245094 ESR2 JASPAR yes 129247483 2389 71051213
chr3 129245080 129245275 SPI1 UCSC Txn Factor no Conserved 129247483 2208 108530364
chr3 129245085 129245089 NFE TRANSFAC yes 129247483 2394 71051214
chr3 129245087 129245097 SREBF1 JASPAR yes 129247483 2386 71051215
chr3 129245087 129245097 SREBF2 JASPAR yes 129247483 2386 71051216
chr3 129245098 129245104 YY1 JASPAR yes 129247483 2379 71051217
chr3 129245110 129245120 MZF1 JASPAR yes 129247483 2363 71051218
chr3 129245111 129245117 MZF1 JASPAR yes 129247483 2366 71051219
chr3 129245139 129245157 IRF2 JASPAR yes 129247483 2326 71051220
chr3 129245140 129245151 CEBPA JASPAR yes 129247483 2332 71051221
chr3 129245141 129245152 CEBPB JASPAR yes 129247483 2331 71051222
chr3 129245153 129245159 SOX10 JASPAR yes 129247483 2324 71051223
chr3 129245154 129245168 SPI1 JASPAR yes 129247483 2315 71051224
chr3 129245158 129245164 PEA3 TRANSFAC yes 129247483 2319 71051225
chr3 129245158 129245179 ZNF263 JASPAR yes 129247483 2304 71051226
chr3 129245177 129245187 ETV6 JASPAR yes 129247483 2296 71051227
chr3 129245179 129245184 ETS2 TRANSFAC yes 129247483 2299 71051228
chr3 129245186 129245201 JUND JASPAR yes 129247483 2282 71051229
chr3 129245187 129245200 JUN JASPAR yes 129247483 2283 71051230
chr3 129245200 129245204 H4TF2 TRANSFAC yes 129247483 2279 71051231
chr3 129245465 129245480 MAFK JASPAR yes 129247483 2003 71051232
chr3 129245491 129245501 SP1 JASPAR yes 129247483 1982 71051233
chr3 129245493 129245505 INSM1 JASPAR yes 129247483 1978 71051234
chr3 129245516 129245522 MAZ TRANSFAC yes 129247483 1961 71051235
chr3 129245520 129245525 SP1 TRANSFAC yes 129247483 1958 71051236
chr3 129245521 129245534 ZBTB18 JASPAR yes 129247483 1949 71051237
chr3 129245521 129245538 RARA JASPAR yes 129247483 1945 71051238
chr3 129245525 129245530 MYC TRANSFAC yes 129247483 1953 71051239
chr3 129245531 129245537 ESR1 TRANSFAC yes 129247483 1946 71051240
chr3 129245533 129245537 ESR1 TRANSFAC yes 129247483 1946 71051241
chr3 129245576 129245587 GCM1 JASPAR yes 129247483 1896 71051242
chr3 129245581 129245595 XBP1 JASPAR yes 129247483 1888 71051243
chr3 129245582 129245586 H4TF2 TRANSFAC yes 129247483 1897 71051244
chr3 129245582 129245596 CREB3 JASPAR yes 129247483 1887 71051245
chr3 129245582 129245596 CREB3L1 JASPAR yes 129247483 1887 71051246
chr3 129245587 129245592 ATF1 TRANSFAC yes 129247483 1891 71051247
chr3 129245610 129245613 MYB TRANSFAC yes 129247483 1870 71051248
chr3 129245610 129245621 PHOX2A JASPAR yes 129247483 1862 71051249
chr3 129245610 129245621 PROP1 JASPAR yes 129247483 1862 71051250
chr3 129245610 129245621 RUNX1 JASPAR yes 129247483 1862 71051251
chr3 129245612 129245622 POU6F2 JASPAR yes 129247483 1861 71051252
chr3 129245613 129245623 EVX2 JASPAR yes 129247483 1860 71051253
chr3 129245613 129245623 GSX1 JASPAR yes 129247483 1860 71051254
chr3 129245613 129245623 HOXA2 JASPAR yes 129247483 1860 71051255
chr3 129245613 129245623 NOTO JASPAR yes 129247483 1860 71051256
chr3 129245616 129245620 YY1 TRANSFAC yes 129247483 1863 71051257
chr3 129245623 129245632 HIC2 JASPAR yes 129247483 1851 71051258
chr3 129245626 129245630 LFA1 TRANSFAC yes 129247483 1853 71051259
chr3 129245666 129245686 RREB1 JASPAR yes 129247483 1797 71051260
chr3 129245667 129245677 SP1 JASPAR yes 129247483 1806 71051261
chr3 129245677 129245682 SP1 TRANSFAC yes 129247483 1801 71051262
chr3 129245693 129245707 CREB3L1 JASPAR yes 129247483 1776 71051263
chr3 129245694 129245704 MAX JASPAR yes 129247483 1779 71051264
chr3 129245695 129245705 CLOCK JASPAR yes 129247483 1778 71051265
chr3 129245695 129245705 HEY1 JASPAR yes 129247483 1778 71051266
chr3 129245695 129245705 HEY2 JASPAR yes 129247483 1778 71051267
chr3 129245695 129245705 MAX JASPAR yes 129247483 1778 71051268
chr3 129245696 129245703 USF1 JASPAR yes 129247483 1780 71051269
chr3 129245697 129245702 MYC TRANSFAC yes 129247483 1781 71051270
chr3 129245697 129245702 USF1 TRANSFAC yes 129247483 1781 71051271
chr3 129245697 129245702 USF2 TRANSFAC yes 129247483 1781 71051272
chr3 129245701 129245710 NFIX JASPAR yes 129247483 1773 71051273
chr3 129245703 129245709 NFIC JASPAR yes 129247483 1774 71051274
SNPs associated with RHO[ENSG00000163914.4], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr3 129655024 rs150670484 C T 401012 Uterus 0.135399 7029473
Details of RHO[ENSG00000163914.4]
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Genomic Location chr3:129247483-129254012[+]
TSS 129247483
Gene Name RHO
Ensembl ID ENSG00000163914.4
ENTREZID 6010
Uniprot
P08100
Protein Name
Rhodopsin
Expression levels of RHO[ENSG00000163914.4]
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