EnhancerDB
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Enhancers that regulate GTF2H4[ENSG00000213780.6]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr6 30740965 30818275 enh23149 30875961 57686
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 30785034 30785335 vista51548 30875961 90626
VISTA
chr6 30785907 30786494 vista51549 30875961 89467
VISTA
chr6 30787859 30788252 vista51550 30875961 87709
VISTA
chr6 30789955 30790218 vista51551 30875961 85743
VISTA
chr6 30796195 30796565 vista51552 30875961 79396
VISTA
chr6 30804295 30804603 vista51553 30875961 71358
VISTA
chr6 30811913 30812084 vista51554 30875961 63877
VISTA
chr6 30820545 30831775 enh23150 30875961 44186
Thyroid Placenta Large Intestine
chr6 30834965 30839195 enh23151 30875961 36766
Placenta Brain (SK-N-MC)
chr6 30840574 30840974 vista51555 30875961 34987
VISTA
chr6 30841885 30846735 enh91685 30875961 29226
Bone Marrow (K562) Uterus Stomach
chr6 30845366 30845734 vista51556 30875961 30227
VISTA
chr6 30847125 30851955 enh100493 30875961 24006
Uterus
chr6 30897391 30897411 vista51557 30875961 21430
VISTA
chr6 30901201 30901293 vista51558 30875961 25240
VISTA
chr6 30910531 30910726 vista51559 30875961 34570
VISTA
chr6 30923441 30923743 vista51560 30875961 47480
VISTA
chr6 30926785 30933735 enh106192 30875961 50824
Peripheral Blood (MM.1S) Brain (SK-N-MC)
chr6 30926851 30926868 vista51561 30875961 50890
VISTA
chr6 30936805 30941130 enh77846 30875961 60844
Muscle (A673)
chr6 30964580 30972435 enh84145 30875961 88619
Prostate (PC-3) Lung (PC-9) Epithelial (MCF-7)
Transcript facotrs that regulate GTF2H4[ENSG00000213780.6]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with GTF2H4[ENSG00000213780.6], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr6 30938265 rs116160890 G A 56382 Esophagus 1.78929e-08 8950991
chr6 30938265 rs116160890 G A 56382 Esophagus 2.98534e-05 8950991
chr6 30755066 rs13197409 G A 120895 Esophagus 1.98904e-06 8948983
chr6 30938265 rs116160890 G A 56382 Heart 1.05705e-07 8950991
chr6 30938265 rs116160890 G A 56382 Heart 2.43184e-08 8950991
chr6 30779842 rs112572402 A G 96119 Pancreas 0.0737932 8949607
chr6 30755066 rs13197409 G A 120895 Ovary 0.187185 8948983
chr6 30938265 rs116160890 G A 56382 Uterus 0.0116749 8950991
chr6 30938265 rs116160890 G A 56382 Thyroid 7.55981e-10 8950991
chr6 30767202 rs61177273 G A 108759 Liver 0.284729 8949239
chr6 30938265 rs116160890 G A 56382 Lung 3.1494e-05 8950991
chr6 30774478 rs117909052 T C 101483 Stomach 0.164102 8949445
chr6 30938265 rs116160890 G A 56382 Adrenal 0.000834838 8950991
Details of GTF2H4[ENSG00000213780.6]
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Genomic Location chr6:30875961-30881883[+]
TSS 30875961
Gene Name GTF2H4
Ensembl ID ENSG00000213780.6
ENTREZID 2968
Uniprot
Q92759
Protein Name
General transcription factor IIH subunit 4
Expression levels of GTF2H4[ENSG00000213780.6]
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