EnhancerDB
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Enhancers that regulate RTBDN[ENSG00000132026.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 12869382 12873742 enh65174 12946242 72500
Pancreas Prostate (RWPE1) Heart
chr19 12880762 12907555 enh5013 12946242 38687
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Blood (Karpas-422) Muscle (Myoblast) Uterus Blood (T-cell)
chr19 12888910 12889352 vista28649 12946242 56890
VISTA
chr19 12889371 12889726 vista28650 12946242 56516
VISTA
chr19 12890492 12890682 vista28651 12946242 55560
VISTA
chr19 12892597 12892707 vista28652 12946242 53535
VISTA
chr19 12892961 12894040 vista28653 12946242 52202
VISTA
chr19 12894545 12895330 vista28654 12946242 50912
VISTA
chr19 12895349 12896178 vista28655 12946242 50064
VISTA
chr19 12896372 12896781 vista28656 12946242 49461
VISTA
chr19 12896870 12897372 vista28657 12946242 48870
VISTA
chr19 12899457 12901460 vista28658 12946242 44782
VISTA
chr19 12901644 12901726 vista28659 12946242 44516
VISTA
chr19 12929124 12929310 vista28660 12946242 16932
VISTA
chr19 12947043 12947383 vista28661 12946242 801
VISTA
chr19 12957682 12957886 vista28662 12946242 11440
VISTA
chr19 12994554 12994766 vista28663 12946242 48312
VISTA
chr19 13006078 13006409 vista28664 12946242 59836
VISTA
chr19 13017585 13022255 enh104516 12946242 71343
Peripheral Blood (MM.1S) Stomach
chr19 13023589 13024232 vista28665 12946242 77347
VISTA
chr19 13024998 13025376 vista28666 12946242 78756
VISTA
Transcript facotrs that regulate RTBDN[ENSG00000132026.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 12937184 12948515 ZNF274 GTRD no Bone Marrow (K562) 12946242 2273 108386727
chr19 12943165 12947442 ZNF274 GTRD no Blood (GM12878) 12946242 1200 108386728
chr19 12943220 12948624 ZNF274 GTRD no Blood (GM12878) 12946242 2382 108386729
chr19 12943222 12949035 ZNF274 GTRD no Blood (GM12878) 12946242 2793 108386730
chr19 12944083 12947244 ZNF274 GTRD no Blood (GM12878) 12946242 1002 108386731
chr19 12944139 12949003 ZNF274 GTRD no Blood (GM12878) 12946242 2103 108386732
chr19 12944157 12947210 ZNF274 GTRD no Blood (GM12878) 12946242 968 108386733
chr19 12944171 12947182 ZNF274 GTRD no Blood (GM12878) 12946242 940 108386734
chr19 12944435 12947374 ZNF274 GTRD no Blood (GM12878) 12946242 1132 108386735
chr19 12944587 12947759 ZNF274 GTRD no Bone Marrow (K562) 12946242 1517 108386736
chr19 12944610 12947198 ZNF274 GTRD no Liver (HepG2) 12946242 956 108386737
chr19 12944751 12947111 ZNF274 GTRD no Blood (GM12878) 12946242 869 108386738
chr19 12944757 12948258 ZNF274 GTRD no Bone Marrow (K562) 12946242 1485 108386739
chr19 12944897 12947055 ZNF274 GTRD no Liver (HepG2) 12946242 813 108386740
chr19 12944991 12947176 ZNF274 GTRD no Bone Marrow (K562) 12946242 934 108386741
chr19 12944993 12947524 ZNF143 GTRD no Epithelial (MCF-7) 12946242 1249 108386742
chr19 12945033 12947239 ZNF274 GTRD no Liver (HepG2) 12946242 997 108386743
chr19 12945127 12947434 ZNF274 GTRD no Bone Marrow (K562) 12946242 1115 108386744
chr19 12945200 12947301 ZNF274 GTRD no Liver (HepG2) 12946242 1042 108386745
chr19 12945233 12947208 ZNF274 GTRD no Liver (HepG2) 12946242 966 108386746
chr19 12945308 12947197 ZNF274 GTRD no Bone Marrow (K562) 12946242 934 108386747
chr19 12945323 12947299 ZNF274 GTRD no Liver (HepG2) 12946242 919 108386748
chr19 12945334 12947298 ZNF274 GTRD no Bone Marrow (K562) 12946242 908 108386749
chr19 12945339 12947097 ZBTB33 GTRD no Brain (SK-N-SH) 12946242 855 108386750
chr19 12945356 12947202 ZNF274 GTRD no Cervix (HeLa-S3) 12946242 886 108386751
chr19 12945361 12947211 ZNF274 GTRD no Bone Marrow (K562) 12946242 881 108386752
chr19 12945366 12947202 ZNF274 GTRD no Cervix (HeLa-S3) 12946242 876 108386753
chr19 12945430 12947197 ZNF274 GTRD no Blood (GM12878) 12946242 812 108386754
chr19 12945538 12947080 ZNF274 GTRD no Cervix (HeLa-S3) 12946242 704 108386755
chr19 12945808 12947756 ZNF274 GTRD no Bone Marrow (K562) 12946242 434 108386756
chr19 12946151 12947421 ZNF274 GTRD no Bone Marrow (K562) 12946242 91 108386757
chr19 12946889 12947179 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 12946242 647 108386758
chr19 12946899 12947953 ZNF274 GTRD no Bone Marrow (K562) 12946242 657 108386759
chr19 12946954 12947554 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 12946242 712 108386760
chr19 12946959 12947569 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 12946242 717 108386761
chr19 12946976 12947496 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 12946242 734 108386762
chr19 12946977 12947557 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 12946242 735 108386763
chr19 12947008 12947332 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 12946242 766 108386764
chr19 12947021 12947441 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 12946242 779 108386765
chr19 12947037 12947401 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 12946242 795 108386766
chr19 12947042 12947432 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 12946242 800 108386767
chr19 12947042 12947442 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 12946242 800 108386768
chr19 12947042 12947498 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 12946242 800 108386769
chr19 12947050 12947430 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 12946242 808 108386770
chr19 12947057 12947513 JUND UCSC Txn Factor no Conserved 12946242 815 108386771
chr19 12947057 12947513 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 12946242 815 108386772
chr19 12947060 12947072 TEAD1 JASPAR yes 12946242 818 70806745
chr19 12947060 12947380 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 12946242 818 108386773
chr19 12947060 12947390 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 12946242 818 108386774
chr19 12947063 12947427 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 12946242 821 108386775
chr19 12947065 12947405 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 12946242 823 108386776
chr19 12947067 12947443 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 12946242 825 108386777
chr19 12947068 12947080 INSM1 JASPAR yes 12946242 826 70806746
chr19 12947072 12947388 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 12946242 830 108386778
chr19 12947074 12947088 PLAG1 JASPAR yes 12946242 832 70806747
chr19 12947075 12947411 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 12946242 833 108386779
chr19 12947076 12947386 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 12946242 834 108386780
chr19 12947076 12947516 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 12946242 834 108386781
chr19 12947078 12947438 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 12946242 836 108386782
chr19 12947078 12947468 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 12946242 836 108386783
chr19 12947082 12947386 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 12946242 840 108386784
chr19 12947082 12947452 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 12946242 840 108386785
chr19 12947086 12947091 SP1 TRANSFAC yes 12946242 844 70806748
chr19 12947087 12947417 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 12946242 845 108386786
chr19 12947089 12947099 SP1 JASPAR yes 12946242 847 70806749
chr19 12947089 12947465 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 12946242 847 108386787
chr19 12947091 12947461 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 12946242 849 108386788
chr19 12947093 12947417 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 12946242 851 108386789
chr19 12947094 12947370 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 12946242 852 108386790
chr19 12947095 12947431 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 12946242 853 108386791
chr19 12947103 12947383 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 12946242 861 108386792
chr19 12947107 12947397 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 12946242 865 108386793
chr19 12947108 12947438 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 12946242 866 108386794
chr19 12947112 12947401 SP1 UCSC Txn Factor no Conserved 12946242 870 108386795
chr19 12947112 12947401 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 12946242 870 108386796
chr19 12947119 12947369 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 12946242 877 108386797
chr19 12947121 12947431 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 12946242 879 108386798
chr19 12947123 12947433 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 12946242 881 108386799
chr19 12947127 12947140 TFAP2B JASPAR yes 12946242 885 70806750
chr19 12947128 12947389 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 12946242 886 108386800
chr19 12947128 12947408 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 12946242 886 108386801
chr19 12947129 12947140 EBF1 JASPAR yes 12946242 887 70806751
chr19 12947129 12947419 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 12946242 887 108386802
chr19 12947135 12947148 NFKB1 JASPAR yes 12946242 893 70806752
chr19 12947135 12947148 NFKB2 JASPAR yes 12946242 893 70806753
chr19 12947135 12947379 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 12946242 893 108386803
chr19 12947136 12947146 NFKB1 JASPAR yes 12946242 894 70806754
chr19 12947136 12947146 REL JASPAR yes 12946242 894 70806755
chr19 12947136 12947395 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 12946242 894 108386804
chr19 12947138 12947398 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 12946242 896 108386805
chr19 12947139 12947409 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 12946242 897 108386806
chr19 12947159 12947403 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 12946242 917 108386807
chr19 12947160 12947171 SPDEF JASPAR yes 12946242 918 70806756
chr19 12947161 12947349 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 12946242 919 108386808
chr19 12947163 12947322 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 12946242 921 108386809
chr19 12947174 12947348 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 12946242 932 108386810
chr19 12947178 12947197 REST JASPAR yes 12946242 936 70806757
chr19 12947179 12947194 RUNX2 JASPAR yes 12946242 937 70806758
chr19 12947208 12947213 H4TF1 TRANSFAC yes 12946242 966 70806759
chr19 12947249 12947253 H4TF2 TRANSFAC yes 12946242 1007 70806760
chr19 12947265 12947269 ESR1 TRANSFAC yes 12946242 1023 70806761
chr19 12947267 12947280 POU2F2 JASPAR yes 12946242 1025 70806762
chr19 12947270 12947276 TCF4 TRANSFAC yes 12946242 1028 70806763
chr19 12947296 12947304 RHOXF1 JASPAR yes 12946242 1054 70806764
chr19 12947302 12947319 PAX9 JASPAR yes 12946242 1060 70806765
chr19 12947305 12947309 ESR1 TRANSFAC yes 12946242 1063 70806766
chr19 12947320 12947326 MAZ TRANSFAC yes 12946242 1078 70806767
chr19 12947324 12947328 LFA1 TRANSFAC yes 12946242 1082 70806768
chr19 12947331 12947342 ESRRA JASPAR yes 12946242 1089 70806769
chr19 12947332 12947347 HNF4A JASPAR yes 12946242 1090 70806770
chr19 12947333 12947347 PLAG1 JASPAR yes 12946242 1091 70806771
chr19 12947333 12947347 RXRB JASPAR yes 12946242 1091 70806772
chr19 12947333 12947347 RXRG JASPAR yes 12946242 1091 70806773
chr19 12947333 12947348 HNF4G JASPAR yes 12946242 1091 70806774
chr19 12947343 12947349 SP1 TRANSFAC yes 12946242 1101 70806775
chr19 12947375 12947380 SP1 TRANSFAC yes 12946242 1133 70806776
SNPs associated with RTBDN[ENSG00000132026.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of RTBDN[ENSG00000132026.9]
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Genomic Location chr19:12936292-12946242[-]
TSS 12946242
Gene Name RTBDN
Ensembl ID ENSG00000132026.9
ENTREZID 83546
Uniprot
Q8N210
K7ESG0
Q9BSG5
Protein Name
isoform CRA_c
Retbindin
Retbindin
Expression levels of RTBDN[ENSG00000132026.9]
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