EnhancerDB
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Enhancers that regulate SRSF1[ENSG00000136450.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 55982093 56031480 enh4496 56084707 53227
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 55992933 55993227 vista25265 56084707 91480
VISTA
chr17 55993641 55993992 vista25266 56084707 90715
VISTA
chr17 56012688 56013140 vista25267 56084707 71567
VISTA
chr17 56013342 56013699 vista25268 56084707 71008
VISTA
chr17 56014018 56014160 vista25269 56084707 70547
VISTA
chr17 56015325 56015755 vista25270 56084707 68952
VISTA
chr17 56020686 56021039 vista25271 56084707 63668
VISTA
chr17 56023350 56023692 vista25272 56084707 61015
VISTA
chr17 56025910 56026308 vista25273 56084707 58399
VISTA
chr17 56064193 56064677 vista25274 56084707 20030
VISTA
chr17 56068785 56080363 enh4497 56084707 4344
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr17 56097085 56104635 enh17246 56084707 12378
Skin (Keratinocyte) Prostate (PC-3) Esophagus Placenta Lung (PC-9) Epithelial (MCF-7)
chr17 56110025 56110231 vista25275 56084707 25318
VISTA
chr17 56122194 56129435 enh17247 56084707 37487
Placenta Heart
chr17 56131605 56140215 enh17248 56084707 46898
Esophagus Thyroid Placenta Lung (PC-9) Uterus
chr17 56138078 56138257 vista25276 56084707 53371
VISTA
chr17 56141885 56146035 enh101508 56084707 57178
Thyroid
chr17 56161643 56161969 vista25277 56084707 76936
VISTA
Transcript facotrs that regulate SRSF1[ENSG00000136450.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 56079703 56079707 YY1 TRANSFAC yes 56084707 5000 55005962
chr17 56079721 56079726 H4TF1 TRANSFAC yes 56084707 4981 55005963
chr17 56079732 56079737 ETS2 TRANSFAC yes 56084707 4970 55005964
chr17 56079742 56079753 HOXA10 JASPAR yes 56084707 4954 55005965
chr17 56079743 56079753 MNX1 JASPAR yes 56084707 4954 55005966
chr17 56079744 56079752 BARX1 JASPAR yes 56084707 4955 55005967
chr17 56079763 56079780 RARA JASPAR yes 56084707 4927 55005968
chr17 56079784 56079796 MEF2B JASPAR yes 56084707 4911 55005969
chr17 56079794 56079808 EBF1 JASPAR yes 56084707 4899 55005970
chr17 56079815 56079827 FOXI1 JASPAR yes 56084707 4880 55005971
chr17 56079816 56079828 FOXC2 JASPAR yes 56084707 4879 55005972
chr17 56079818 56079822 YY1 TRANSFAC yes 56084707 4885 55005973
chr17 56079818 56079833 MEF2A JASPAR yes 56084707 4874 55005974
chr17 56079819 56079834 MEF2C JASPAR yes 56084707 4873 55005975
chr17 56079822 56079826 YY1 TRANSFAC yes 56084707 4881 55005976
chr17 56079829 56079833 H4TF2 TRANSFAC yes 56084707 4874 55005977
chr17 56079832 56079838 SP1 TRANSFAC yes 56084707 4869 55005978
chr17 56079832 56079842 SP1 JASPAR yes 56084707 4865 55005979
chr17 56079851 56079865 EBF1 JASPAR yes 56084707 4842 55005980
chr17 56079863 56079867 NFE TRANSFAC yes 56084707 4840 55005981
chr17 56079875 56079889 SPI1 JASPAR yes 56084707 4818 55005982
chr17 56079905 56079908 MYB TRANSFAC yes 56084707 4799 55005983
chr17 56079964 56079980 SRF JASPAR yes 56084707 4727 55005984
chr17 56079965 56079977 SRF JASPAR yes 56084707 4730 55005985
chr17 56079967 56079979 SRF JASPAR yes 56084707 4728 55005986
chr17 56079970 56079974 TEAD2 TRANSFAC yes 56084707 4733 55005987
chr17 56079988 56079997 HIC2 JASPAR yes 56084707 4710 55005988
chr17 56079997 56080007 HOXD13 JASPAR yes 56084707 4700 55005989
chr17 56079997 56080008 HOXA10 JASPAR yes 56084707 4699 55005990
chr17 56080002 56080011 SRY JASPAR yes 56084707 4696 55005991
chr17 56080004 56080007 MYB TRANSFAC yes 56084707 4700 55005992
chr17 56080004 56080018 JUN JASPAR yes 56084707 4689 55005993
chr17 56080007 56080018 FOSL2 JASPAR yes 56084707 4689 55005994
chr17 56080007 56080018 JUNB JASPAR yes 56084707 4689 55005995
chr17 56080008 56080019 FOS JASPAR yes 56084707 4688 55005996
chr17 56080008 56080019 JUND JASPAR yes 56084707 4688 55005997
chr17 56080008 56080019 NFE2 JASPAR yes 56084707 4688 55005998
chr17 56080009 56080018 JDP2 JASPAR yes 56084707 4689 55005999
chr17 56080009 56080023 JUN JASPAR yes 56084707 4684 55006000
chr17 56080010 56080021 BATF JASPAR yes 56084707 4686 55006001
chr17 56080037 56080051 MTF1 JASPAR yes 56084707 4656 55006002
chr17 56080039 56080054 NR2C2 JASPAR yes 56084707 4653 55006003
chr17 56080055 56080076 IRF1 JASPAR yes 56084707 4631 55006004
chr17 56080059 56080073 STAT1 JASPAR yes 56084707 4634 55006005
chr17 56080060 56080066 HiNF-A TRANSFAC yes 56084707 4641 55006006
chr17 56080065 56080072 JUN TRANSFAC yes 56084707 4635 55006007
chr17 56080065 56080072 SP1 TRANSFAC yes 56084707 4635 55006008
chr17 56080073 56080087 RXRB JASPAR yes 56084707 4620 55006009
chr17 56080092 56080108 ZNF143 JASPAR yes 56084707 4599 55006010
chr17 56080099 56080110 FOSL2 JASPAR yes 56084707 4597 55006011
chr17 56080101 56080114 SMAD2 JASPAR yes 56084707 4593 55006012
chr17 56080104 56080114 TBR1 JASPAR yes 56084707 4593 55006013
chr17 56080105 56080115 TBX21 JASPAR yes 56084707 4592 55006014
chr17 56080106 56080114 MGA JASPAR yes 56084707 4593 55006015
chr17 56080106 56080114 TBX15 JASPAR yes 56084707 4593 55006016
chr17 56080106 56080114 TBX1 JASPAR yes 56084707 4593 55006017
chr17 56080106 56080114 TBX4 JASPAR yes 56084707 4593 55006018
chr17 56080106 56080114 TBX5 JASPAR yes 56084707 4593 55006019
chr17 56080106 56080115 ZEB1 JASPAR yes 56084707 4592 55006020
chr17 56080106 56080118 PKNOX1 JASPAR yes 56084707 4589 55006021
chr17 56080106 56080118 TGIF1 JASPAR yes 56084707 4589 55006022
chr17 56080106 56080119 ZBTB18 JASPAR yes 56084707 4588 55006023
chr17 56080107 56080117 FIGLA JASPAR yes 56084707 4590 55006024
chr17 56080107 56080117 ID4 JASPAR yes 56084707 4590 55006025
chr17 56080107 56080117 TCF3 JASPAR yes 56084707 4590 55006026
chr17 56080107 56080117 TCF4 JASPAR yes 56084707 4590 55006027
chr17 56080108 56080117 SNAI2 JASPAR yes 56084707 4590 55006028
chr17 56080109 56080114 USF2 TRANSFAC yes 56084707 4593 55006029
chr17 56080121 56080124 MYB TRANSFAC yes 56084707 4583 55006030
chr17 56080185 56080188 MYB TRANSFAC yes 56084707 4519 55006031
chr17 56080194 56080209 RUNX2 JASPAR yes 56084707 4498 55006032
chr17 56080206 56080221 MEF2C JASPAR yes 56084707 4486 55006033
chr17 56080207 56080222 MEF2A JASPAR yes 56084707 4485 55006034
chr17 56080208 56080220 MEF2A JASPAR yes 56084707 4487 55006035
chr17 56080208 56080220 MEF2B JASPAR yes 56084707 4487 55006036
chr17 56080208 56080220 MEF2D JASPAR yes 56084707 4487 55006037
chr17 56080214 56080229 MEF2C JASPAR yes 56084707 4478 55006038
chr17 56080215 56080230 MEF2A JASPAR yes 56084707 4477 55006039
chr17 56080229 56080233 LFA1 TRANSFAC yes 56084707 4474 55006040
chr17 56080305 56080322 ESR1 JASPAR yes 56084707 4385 55006041
chr17 56080305 56080323 ESR2 JASPAR yes 56084707 4384 55006042
chr17 56080324 56080334 SREBF1 JASPAR yes 56084707 4373 55006043
chr17 56080324 56080334 SREBF2 JASPAR yes 56084707 4373 55006044
chr17 56080325 56080333 MGA JASPAR yes 56084707 4374 55006045
SNPs associated with SRSF1[ENSG00000136450.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 55965322 rs192393347 C T 115399 Esophagus 0.124606 4954007
chr17 56155594 rs72839937 T C 70887 Esophagus 0.269674 4955347
chr17 55718427 rs4793557 T G 362294 Heart 0.23581 4952044
chr17 55261105 rs77034523 C T 819616 Heart 0.271421 4947457
chr17 56410615 rs76911125 G A 325908 Pancreas 0.391954 4955947
chr17 55681673 rs117104479 G A 399048 Breast 0.364732 4951625
chr17 55699384 rs8072276 A C,G 381337 Uterus 0.186453 4951801
chr17 56411460 rs7212018 G A 326753 Thyroid 0.210664 4955954
chr17 55618697 rs17834557 T C 462024 Liver 0.410124 4950933
chr17 55502492 rs74417062 G A 578229 Adrenal 0.238405 4949680
Details of SRSF1[ENSG00000136450.8]
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Genomic Location chr17:56080721-56084707[-]
TSS 56084707
Gene Name SRSF1
Ensembl ID ENSG00000136450.8
ENTREZID 6426
Uniprot
Q59FA2
Q07955
Protein Name
Serine/arginine-rich splicing factor 1
Serine/arginine-rich-splicing factor 1
Expression levels of SRSF1[ENSG00000136450.8]
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