EnhancerDB
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Enhancers that regulate PHLDA3[ENSG00000174307.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 201348285 201352435 enh108393 201438365 85930
Lung (PC-9)
chr1 201366439 201366550 vista4547 201438365 71815
VISTA
chr1 201391465 201395615 enh874 201438365 42750
Blood (Karpas-422)
chr1 201414985 201433510 enh875 201438365 4855
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 201424936 201425126 vista4548 201438365 13239
VISTA
chr1 201426190 201426373 vista4549 201438365 11992
VISTA
chr1 201431088 201431253 vista4550 201438365 7112
VISTA
chr1 201440605 201452315 enh876 201438365 2240
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Muscle (A673) Placenta Blood (Karpas-422) Pancreas Thymus
chr1 201445401 201445412 vista4551 201438365 7036
VISTA
chr1 201449602 201449822 vista4552 201438365 11237
VISTA
chr1 201463125 201475335 enh12520 201438365 24760
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
chr1 201463619 201463933 vista4553 201438365 25254
VISTA
chr1 201469668 201470038 vista4554 201438365 31303
VISTA
chr1 201472589 201472996 vista4555 201438365 34224
VISTA
chr1 201476865 201492055 enh12521 201438365 38500
Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Muscle (A673) Placenta Lung (PC-9) Epithelial (MCF-7)
chr1 201492445 201517481 enh12522 201438365 54080
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Heart
chr1 201494461 201494578 vista4556 201438365 56096
VISTA
chr1 201500233 201500477 vista4557 201438365 61868
VISTA
chr1 201508517 201509575 vista4558 201438365 70152
VISTA
chr1 201515368 201515617 vista4559 201438365 77003
VISTA
chr1 201518985 201542475 enh27421 201438365 80620
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Heart
chr1 201520953 201521395 vista4560 201438365 82588
VISTA
chr1 201524172 201524339 vista4561 201438365 85807
VISTA
Transcript facotrs that regulate PHLDA3[ENSG00000174307.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 201433186 201433502 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 201438365 4863 21364198
chr1 201433347 201433368 ZNF263 JASPAR yes 201438365 4997 34496666
chr1 201433389 201433393 H1TF2 TRANSFAC yes 201438365 4972 34496668
chr1 201433389 201433393 NFE TRANSFAC yes 201438365 4972 34496669
chr1 201433389 201433393 SRF TRANSFAC yes 201438365 4972 34496670
chr1 201433401 201433413 TEAD1 JASPAR yes 201438365 4952 34496671
chr1 201433411 201433426 HNF4A JASPAR yes 201438365 4939 34496672
chr1 201433412 201433427 HNF4G JASPAR yes 201438365 4938 34496673
chr1 201433412 201433427 LEF1 JASPAR yes 201438365 4938 34496674
chr1 201433422 201433440 MAFF JASPAR yes 201438365 4925 34496675
chr1 201433423 201433438 MAFK JASPAR yes 201438365 4927 34496676
chr1 201433424 201433435 STAT3 JASPAR yes 201438365 4930 34496677
chr1 201433433 201433442 VENTX JASPAR yes 201438365 4923 34496678
chr1 201433443 201433457 FOXF2 JASPAR yes 201438365 4908 34496679
chr1 201433461 201433465 YY1 TRANSFAC yes 201438365 4900 34496680
chr1 201433471 201433476 SP1 TRANSFAC yes 201438365 4889 34496681
chr1 201433473 201433483 GSC2 JASPAR yes 201438365 4882 34496682
chr1 201433473 201433483 GSC JASPAR yes 201438365 4882 34496683
chr1 201433474 201433482 OTX1 JASPAR yes 201438365 4883 34496684
chr1 201433474 201433482 OTX2 JASPAR yes 201438365 4883 34496685
chr1 201433474 201433482 RHOXF1 JASPAR yes 201438365 4883 34496686
chr1 201433474 201433483 PITX3 JASPAR yes 201438365 4882 34496687
chr1 201440920 201441240 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 201438365 2555 21364199
chr1 201440929 201441269 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 201438365 2564 21364200
chr1 201442330 201442334 TEAD2 TRANSFAC yes 201438365 3965 34496688
chr1 201442330 201442335 TBP TRANSFAC yes 201438365 3965 34496689
chr1 201442330 201442336 TMF TRANSFAC yes 201438365 3965 34496690
chr1 201442330 201442344 POU4F1 JASPAR yes 201438365 3965 34496691
chr1 201442331 201442347 POU4F3 JASPAR yes 201438365 3966 34496692
chr1 201442339 201442346 TBP TRANSFAC yes 201438365 3974 34496693
chr1 201442339 201442346 TFIID TRANSFAC yes 201438365 3974 34496694
chr1 201442379 201442394 HNF1A JASPAR yes 201438365 4014 34496695
chr1 201442380 201442393 HNF1B JASPAR yes 201438365 4015 34496696
chr1 201442389 201442392 MYB TRANSFAC yes 201438365 4024 34496697
chr1 201442406 201442410 YY1 TRANSFAC yes 201438365 4041 34496698
chr1 201442409 201442412 MYB TRANSFAC yes 201438365 4044 34496699
chr1 201442410 201442426 SOX8 JASPAR yes 201438365 4045 34496700
chr1 201442433 201442448 JUND JASPAR yes 201438365 4068 34496701
chr1 201442436 201442448 JDP2 JASPAR yes 201438365 4071 34496702
chr1 201442436 201442451 JUND JASPAR yes 201438365 4071 34496703
chr1 201442449 201442455 TCF4 TRANSFAC yes 201438365 4084 34496704
chr1 201442487 201442493 JUN TRANSFAC yes 201438365 4122 34496705
chr1 201442566 201442587 ZNF263 JASPAR yes 201438365 4201 34496706
chr1 201442568 201442575 SPIB JASPAR yes 201438365 4203 34496707
chr1 201442573 201442577 NFE TRANSFAC yes 201438365 4208 34496708
chr1 201442574 201442579 GATA2 JASPAR yes 201438365 4209 34496709
chr1 201442582 201442601 REST JASPAR yes 201438365 4217 34496710
chr1 201442585 201442600 RUNX2 JASPAR yes 201438365 4220 34496711
chr1 201442612 201442622 NFIA JASPAR yes 201438365 4247 34496712
chr1 201442613 201442622 NFIX JASPAR yes 201438365 4248 34496713
chr1 201442614 201442620 NFIC JASPAR yes 201438365 4249 34496714
chr1 201442624 201442639 TFAP2A JASPAR yes 201438365 4259 34496715
chr1 201442624 201442639 TFAP2C JASPAR yes 201438365 4259 34496716
chr1 201442625 201442633 EHF JASPAR yes 201438365 4260 34496717
chr1 201442633 201442648 HNF4A JASPAR yes 201438365 4268 34496718
chr1 201442634 201442648 NR2F1 JASPAR yes 201438365 4269 34496719
chr1 201442634 201442649 HNF4G JASPAR yes 201438365 4269 34496720
chr1 201442641 201442651 ID4 JASPAR yes 201438365 4276 34496721
chr1 201442641 201442651 TCF3 JASPAR yes 201438365 4276 34496722
chr1 201442641 201442651 TCF4 JASPAR yes 201438365 4276 34496723
chr1 201442642 201442651 SNAI2 JASPAR yes 201438365 4277 34496724
chr1 201442643 201442648 USF2 TRANSFAC yes 201438365 4278 34496725
chr1 201442649 201442653 NFE TRANSFAC yes 201438365 4284 34496726
chr1 201442658 201442662 NFE TRANSFAC yes 201438365 4293 34496727
chr1 201442659 201442674 HSF1 JASPAR yes 201438365 4294 34496728
chr1 201442695 201442699 YY1 TRANSFAC yes 201438365 4330 34496729
chr1 201442766 201442781 RUNX2 JASPAR yes 201438365 4401 34496730
chr1 201442774 201442786 INSM1 JASPAR yes 201438365 4409 34496731
chr1 201442807 201442812 GATA2 JASPAR yes 201438365 4442 34496732
chr1 201442813 201442829 SOX8 JASPAR yes 201438365 4448 34496733
chr1 201442841 201442854 POU3F3 JASPAR yes 201438365 4476 34496734
chr1 201442843 201442852 POU5F1B JASPAR yes 201438365 4478 34496735
chr1 201442849 201442855 ZNF354C JASPAR yes 201438365 4484 34496736
chr1 201442852 201442867 SOX21 JASPAR yes 201438365 4487 34496737
chr1 201442860 201442864 YY1 TRANSFAC yes 201438365 4495 34496738
chr1 201442868 201442875 NKX3-1 JASPAR yes 201438365 4503 34496739
chr1 201442875 201442888 SMAD2 JASPAR yes 201438365 4510 34496740
chr1 201442879 201442883 NFE TRANSFAC yes 201438365 4514 34496741
chr1 201442879 201442884 GATA1 TRANSFAC yes 201438365 4514 34496742
chr1 201442879 201442885 GATA3 JASPAR yes 201438365 4514 34496743
chr1 201442895 201442909 TLX1 JASPAR yes 201438365 4530 34496744
chr1 201442911 201442931 RREB1 JASPAR yes 201438365 4546 34496745
chr1 201442915 201442935 RREB1 JASPAR yes 201438365 4550 34496746
chr1 201442916 201442931 FOXP1 JASPAR yes 201438365 4551 34496747
chr1 201442916 201442936 RREB1 JASPAR yes 201438365 4551 34496748
chr1 201442919 201442939 RREB1 JASPAR yes 201438365 4554 34496749
chr1 201442920 201442940 RREB1 JASPAR yes 201438365 4555 34496750
chr1 201442923 201442929 TCF4 TRANSFAC yes 201438365 4558 34496751
chr1 201442923 201442935 FOXI1 JASPAR yes 201438365 4558 34496752
chr1 201442923 201442938 FOXP1 JASPAR yes 201438365 4558 34496753
chr1 201442924 201442944 RREB1 JASPAR yes 201438365 4559 34496754
chr1 201442926 201442941 FOXA1 JASPAR yes 201438365 4561 34496755
chr1 201442927 201442939 FOXI1 JASPAR yes 201438365 4562 34496756
chr1 201442927 201442942 FOXP1 JASPAR yes 201438365 4562 34496757
chr1 201442928 201442940 FOXC2 JASPAR yes 201438365 4563 34496758
chr1 201442930 201442941 FOXA1 JASPAR yes 201438365 4565 34496759
chr1 201442931 201442946 FOXP1 JASPAR yes 201438365 4566 34496760
chr1 201442932 201442943 FOXP2 JASPAR yes 201438365 4567 34496761
chr1 201442951 201442970 PAX5 JASPAR yes 201438365 4586 34496762
chr1 201442959 201442963 NFE TRANSFAC yes 201438365 4594 34496763
chr1 201442991 201443001 SREBF1 JASPAR yes 201438365 4626 34496764
chr1 201443021 201443031 SREBF2 JASPAR yes 201438365 4656 34496765
chr1 201443028 201443049 ZNF263 JASPAR yes 201438365 4663 34496766
chr1 201443077 201443096 PAX5 JASPAR yes 201438365 4712 34496767
chr1 201443080 201443089 HIC2 JASPAR yes 201438365 4715 34496768
chr1 201443089 201443092 MYB TRANSFAC yes 201438365 4724 34496769
chr1 201443095 201443110 MEF2A JASPAR yes 201438365 4730 34496770
chr1 201443096 201443111 MEF2C JASPAR yes 201438365 4731 34496771
chr1 201443097 201443109 MEF2A JASPAR yes 201438365 4732 34496772
chr1 201443097 201443109 MEF2B JASPAR yes 201438365 4732 34496773
chr1 201443097 201443109 MEF2D JASPAR yes 201438365 4732 34496774
chr1 201443099 201443103 YY1 TRANSFAC yes 201438365 4734 34496775
chr1 201443144 201443148 H1TF2 TRANSFAC yes 201438365 4779 34496776
chr1 201443144 201443148 NFE TRANSFAC yes 201438365 4779 34496777
chr1 201443144 201443148 SRF TRANSFAC yes 201438365 4779 34496778
chr1 201443149 201443162 NR2F1 JASPAR yes 201438365 4784 34496779
chr1 201443196 201443208 PKNOX1 JASPAR yes 201438365 4831 34496780
chr1 201443196 201443208 TGIF1 JASPAR yes 201438365 4831 34496781
chr1 201443196 201443208 TGIF2 JASPAR yes 201438365 4831 34496782
chr1 201443223 201443227 NFE TRANSFAC yes 201438365 4858 34496783
chr1 201443223 201443228 GATA1 TRANSFAC yes 201438365 4858 34496784
chr1 201443223 201443229 GATA3 JASPAR yes 201438365 4858 34496785
chr1 201443225 201443240 FOXP1 JASPAR yes 201438365 4860 34496786
chr1 201443226 201443237 FOXP2 JASPAR yes 201438365 4861 34496787
chr1 201443230 201443245 FOXP1 JASPAR yes 201438365 4865 34496788
chr1 201443249 201443270 REST JASPAR yes 201438365 4884 34496789
chr1 201443250 201443269 REST JASPAR yes 201438365 4885 34496790
chr1 201443263 201443274 CEBPB JASPAR yes 201438365 4898 34496791
chr1 201443264 201443275 CEBPA JASPAR yes 201438365 4899 34496792
chr1 201443268 201443279 FOXH1 JASPAR yes 201438365 4903 34496793
chr1 201443281 201443296 AR JASPAR yes 201438365 4916 34496794
chr1 201443286 201443300 POU4F1 JASPAR yes 201438365 4921 34496795
chr1 201443286 201443302 POU4F2 JASPAR yes 201438365 4921 34496796
chr1 201443286 201443302 POU4F3 JASPAR yes 201438365 4921 34496797
chr1 201443289 201443304 HNF1A JASPAR yes 201438365 4924 34496798
chr1 201443290 201443303 HNF1B JASPAR yes 201438365 4925 34496799
chr1 201443290 201443304 POU4F1 JASPAR yes 201438365 4925 34496800
chr1 201443290 201443306 POU4F3 JASPAR yes 201438365 4925 34496801
chr1 201443293 201443303 EVX1 JASPAR yes 201438365 4928 34496802
chr1 201443293 201443303 POU6F1 JASPAR yes 201438365 4928 34496803
chr1 201443298 201443319 IRF1 JASPAR yes 201438365 4933 34496804
chr1 201443304 201443325 IRF1 JASPAR yes 201438365 4939 34496805
chr1 201443307 201443321 IRF7 JASPAR yes 201438365 4942 34496806
chr1 201443343 201443364 ZNF263 JASPAR yes 201438365 4978 34496807
chr1 201443345 201443363 RARA JASPAR yes 201438365 4980 34496808
chr1 201443348 201443355 NFATC2 JASPAR yes 201438365 4983 34496809
chr1 201443352 201443373 ZNF263 JASPAR yes 201438365 4987 34496810
chr1 201443355 201443360 GATA2 JASPAR yes 201438365 4990 34496811
chr1 201443355 201443376 ZNF263 JASPAR yes 201438365 4990 34496812
chr1 201443364 201443374 SP1 JASPAR yes 201438365 4999 34496813
chr1 201443365 201443372 CEBPA TRANSFAC yes 201438365 5000 34496814
SNPs associated with PHLDA3[ENSG00000174307.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 201448351 rs12075479 C A 9986 Esophagus 8.88651e-06 854050
chr1 201675136 rs6427918 T C 236771 Esophagus 0.191392 856819
chr1 201444013 rs5009458 C T 5648 Heart 0.000639659 853998
chr1 201054965 rs111258345 C T 379655 Pancreas 0.323565 850963
chr1 201344586 rs79833614 C T 90034 Ovary 0.465044 853276
chr1 201106373 rs2365288 T C 328247 Liver 0.460481 851154
chr1 202154564 rs60041232 G C 716199 Lung 0.00959528 860677
chr1 201423940 rs3887566 G C 10680 Stomach 0.133529 853754
Details of PHLDA3[ENSG00000174307.5]
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Genomic Location chr1:201434620-201438365[-]
TSS 201438365
Gene Name PHLDA3
Ensembl ID ENSG00000174307.5
ENTREZID 23612
Uniprot
Q9Y5J5
Protein Name
Pleckstrin homology-like domain family A member 3
Expression levels of PHLDA3[ENSG00000174307.5]
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