EnhancerDB
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Enhancers that regulate SUPT4H1[ENSG00000213246.2]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 56359005 56359460 vista25282 56430454 70994
VISTA
chr17 56362029 56362418 vista25283 56430454 68036
VISTA
chr17 56391648 56391970 vista25284 56430454 38484
VISTA
chr17 56410599 56410851 vista25285 56430454 19603
VISTA
chr17 56410845 56419415 enh4498 56430454 11039
Liver (HepG2) Epithelial (MCF-7) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
chr17 56411173 56411562 vista25286 56430454 18892
VISTA
chr17 56412418 56413089 vista25287 56430454 17365
VISTA
chr17 56413212 56413667 vista25288 56430454 16787
VISTA
chr17 56415976 56416316 vista25289 56430454 14138
VISTA
chr17 56417498 56417914 vista25290 56430454 12540
VISTA
chr17 56419503 56419633 vista25291 56430454 10821
VISTA
chr17 56421439 56421596 vista25292 56430454 8858
VISTA
chr17 56426877 56426962 vista25293 56430454 3492
VISTA
chr17 56428194 56428499 vista25294 56430454 1955
VISTA
chr17 56439825 56447075 enh17249 56430454 9371
Blood (OCI-LY7) Placenta Peripheral Blood (MM.1S) Thymus Stomach
chr17 56441767 56441894 vista25295 56430454 11313
VISTA
chr17 56450725 56479661 enh4499 56430454 20271
Bone Marrow (K562) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Liver (HepG2)
chr17 56468859 56469318 vista25296 56430454 38405
VISTA
chr17 56480586 56480907 vista25297 56430454 50132
VISTA
chr17 56480885 56485535 enh86257 56430454 50431
Colon (HCT116) Liver (HepG2)
chr17 56486665 56492575 enh62633 56430454 56211
Esophagus Prostate (PC-3) Stomach Colon (HCT116)
chr17 56503287 56507993 enh86258 56430454 72833
Colon (HCT116) Peripheral Blood (MM.1S)
chr17 56521624 56527091 enh69303 56430454 91170
Neural Stem Cells (H9)
Transcript facotrs that regulate SUPT4H1[ENSG00000213246.2]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 56426880 56426886 ETS1 JASPAR yes 56430454 3568 21262665
chr17 56426880 56426886 SPI1 JASPAR yes 56430454 3568 21262666
chr17 56426932 56426944 FOXI1 JASPAR yes 56430454 3510 21262667
chr17 56426934 56426945 FOXC1 JASPAR yes 56430454 3509 21262668
chr17 56426935 56426939 YY1 TRANSFAC yes 56430454 3515 21262669
chr17 56426945 56426949 H1TF2 TRANSFAC yes 56430454 3505 21262670
chr17 56426945 56426949 NFE TRANSFAC yes 56430454 3505 21262671
chr17 56426945 56426949 SRF TRANSFAC yes 56430454 3505 21262672
chr17 56428195 56428210 FOXP1 JASPAR yes 56430454 2244 21262673
chr17 56428196 56428211 FOXP1 JASPAR yes 56430454 2243 21262674
chr17 56428196 56428217 IRF1 JASPAR yes 56430454 2237 21262675
chr17 56428197 56428212 FOXP1 JASPAR yes 56430454 2242 21262676
chr17 56428197 56428218 IRF1 JASPAR yes 56430454 2236 21262677
chr17 56428198 56428213 FOXP1 JASPAR yes 56430454 2241 21262678
chr17 56428198 56428219 IRF1 JASPAR yes 56430454 2235 21262679
chr17 56428199 56428214 FOXP1 JASPAR yes 56430454 2240 21262680
chr17 56428199 56428220 IRF1 JASPAR yes 56430454 2234 21262681
chr17 56428200 56428215 FOXP1 JASPAR yes 56430454 2239 21262682
chr17 56428200 56428221 IRF1 JASPAR yes 56430454 2233 21262683
chr17 56428201 56428216 FOXP1 JASPAR yes 56430454 2238 21262684
chr17 56428201 56428222 IRF1 JASPAR yes 56430454 2232 21262685
chr17 56428202 56428217 FOXP1 JASPAR yes 56430454 2237 21262686
chr17 56428202 56428223 IRF1 JASPAR yes 56430454 2231 21262687
chr17 56428203 56428218 FOXP1 JASPAR yes 56430454 2236 21262688
chr17 56428203 56428224 IRF1 JASPAR yes 56430454 2230 21262689
chr17 56428204 56428219 FOXP1 JASPAR yes 56430454 2235 21262690
chr17 56428207 56428222 STAT2 JASPAR yes 56430454 2232 21262691
chr17 56428214 56428226 IRF1 JASPAR yes 56430454 2228 21262692
chr17 56428216 56428229 SCRT2 JASPAR yes 56430454 2225 21262693
chr17 56428220 56428230 MSC JASPAR yes 56430454 2224 21262694
chr17 56428230 56428234 LFA1 TRANSFAC yes 56430454 2220 21262695
chr17 56428244 56428248 YY1 TRANSFAC yes 56430454 2206 21262696
chr17 56428247 56429151 ZNF274 GTRD no Blood (GM12878) 56430454 1303 108275176
chr17 56428254 56428275 ZNF263 JASPAR yes 56430454 2179 21262697
chr17 56428257 56428275 IRF2 JASPAR yes 56430454 2179 21262698
chr17 56428267 56428271 YY1 TRANSFAC yes 56430454 2183 21262699
chr17 56428278 56428291 POU2F2 JASPAR yes 56430454 2163 21262700
chr17 56428286 56429092 ZNF274 GTRD no Blood (GM12878) 56430454 1362 108275177
chr17 56428290 56428294 YY1 TRANSFAC yes 56430454 2160 21262701
chr17 56428294 56428297 MYB TRANSFAC yes 56430454 2157 21262702
chr17 56428294 56428306 FOXI1 JASPAR yes 56430454 2148 21262703
chr17 56428301 56428305 YY1 TRANSFAC yes 56430454 2149 21262704
chr17 56428313 56428323 TEAD1 JASPAR yes 56430454 2131 21262705
chr17 56428335 56428349 TCF7L2 JASPAR yes 56430454 2105 21262706
chr17 56428355 56428359 YY1 TRANSFAC yes 56430454 2095 21262707
chr17 56428361 56428368 NKX3-1 JASPAR yes 56430454 2086 21262708
chr17 56428367 56428387 TP53 JASPAR yes 56430454 2067 21262709
chr17 56428372 56428390 SRF JASPAR yes 56430454 2064 21262710
chr17 56428374 56428392 SRF JASPAR yes 56430454 2062 21262711
chr17 56428385 56428395 SMAD3 JASPAR yes 56430454 2059 21262712
chr17 56428389 56428832 ZNF274 GTRD no Blood (GM12878) 56430454 1622 108275178
chr17 56428390 56428402 PKNOX1 JASPAR yes 56430454 2052 21262713
chr17 56428390 56428402 TGIF2 JASPAR yes 56430454 2052 21262714
chr17 56428395 56428399 YY1 TRANSFAC yes 56430454 2055 21262715
chr17 56428398 56428407 NKX2-8 JASPAR yes 56430454 2047 21262716
chr17 56428398 56428408 NKX2-3 JASPAR yes 56430454 2046 21262717
chr17 56428415 56428425 CLOCK JASPAR yes 56430454 2029 21262718
chr17 56428417 56428422 MYC TRANSFAC yes 56430454 2032 21262719
chr17 56428417 56428422 USF1 TRANSFAC yes 56430454 2032 21262720
chr17 56428417 56428422 USF2 TRANSFAC yes 56430454 2032 21262721
chr17 56428417 56428424 USF1 JASPAR yes 56430454 2030 21262722
chr17 56428420 56428426 ZNF354C JASPAR yes 56430454 2028 21262723
chr17 56428422 56428427 GATA2 JASPAR yes 56430454 2027 21262724
chr17 56428429 56428433 ESR1 TRANSFAC yes 56430454 2021 21262725
chr17 56428440 56428727 ZNF274 GTRD no Blood (GM12878) 56430454 1727 108275179
chr17 56428459 56428474 MEF2C JASPAR yes 56430454 1980 21262726
chr17 56428460 56428475 MEF2A JASPAR yes 56430454 1979 21262727
chr17 56428469 56428472 MYB TRANSFAC yes 56430454 1982 21262728
chr17 56428480 56428725 ZNF274 GTRD no Blood (GM12878) 56430454 1729 108275180
SNPs associated with SUPT4H1[ENSG00000213246.2], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 56716381 rs12951494 C T 285927 Ovary 0.193697 4956996
chr17 55467677 rs6503811 T C 954862 Uterus 0.359324 4949214
chr17 55598736 rs4793860 G A 823803 Liver 0.39825 4950665
chr17 55522384 rs12945949 A C 900155 Adrenal 0.203606 4949790
Details of SUPT4H1[ENSG00000213246.2]
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Genomic Location chr17:56422539-56430454[-]
TSS 56430454
Gene Name SUPT4H1
Ensembl ID ENSG00000213246.2
ENTREZID 6827
Uniprot
P63272
Protein Name
Suppressor of Ty 4 homolog 1
Transcription elongation factor SPT4
Expression levels of SUPT4H1[ENSG00000213246.2]
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