EnhancerDB
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Enhancers that regulate SMAD3[ENSG00000166949.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr15 67284425 67291960 enh81016 67356101 64141
Prostate (PC-3) Liver (HepG2) Bone (Osteoblast) Lung (PC-9) Muscle (Myoblast)
chr15 67287183 67287436 vista20405 67356101 68665
VISTA
chr15 67293960 67298838 enh81017 67356101 57263
Muscle (Myoblast) Prostate (PC-3) Blood (GM12878)
chr15 67301672 67310015 enh62484 67356101 46086
Esophagus Bone (Osteoblast) Stomach Muscle (Myoblast) Neural Stem Cells (H9) Heart
chr15 67310482 67310534 vista20406 67356101 45567
VISTA
chr15 67311945 67345195 enh3670 67356101 10906
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr15 67325888 67326210 vista20407 67356101 29891
VISTA
chr15 67341124 67341334 vista20408 67356101 14767
VISTA
chr15 67346705 67350875 enh3671 67356101 5226
Blood (T-cell) Blood (Karpas-422)
chr15 67348530 67348587 vista20409 67356101 7514
VISTA
chr15 67359902 67360303 vista20410 67356101 3801
VISTA
chr15 67361222 67430135 enh3672 67356101 5121
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr15 67366599 67366961 vista20411 67356101 10498
VISTA
chr15 67373443 67373710 vista20412 67356101 17342
VISTA
chr15 67378105 67378547 vista20413 67356101 22004
VISTA
chr15 67383217 67384219 vista20414 67356101 27116
VISTA
chr15 67385827 67386130 vista20415 67356101 29726
VISTA
chr15 67393197 67393867 vista20416 67356101 37096
VISTA
chr15 67394592 67394967 vista20417 67356101 38491
VISTA
chr15 67399103 67399775 vista20418 67356101 43002
VISTA
chr15 67401891 67402640 vista20419 67356101 45790
VISTA
chr15 67409139 67409556 vista20420 67356101 53038
VISTA
chr15 67413336 67413759 vista20421 67356101 57235
VISTA
chr15 67423316 67423661 vista20422 67356101 67215
VISTA
chr15 67426476 67426864 vista20423 67356101 70375
VISTA
chr15 67433127 67437427 enh62485 67356101 77026
Esophagus Prostate (PC-3) Prostate (RWPE1)
chr15 67436996 67437215 vista20424 67356101 80895
VISTA
chr15 67440032 67440420 vista20425 67356101 83931
VISTA
chr15 67440675 67441024 vista20426 67356101 84574
VISTA
chr15 67442347 67443164 vista20427 67356101 86246
VISTA
chr15 67444701 67456459 enh16259 67356101 88600
Prostate (PC-3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Uterus Heart
Transcript facotrs that regulate SMAD3[ENSG00000166949.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr15 67356231 67360838 POLR2A UCSC Txn Factor no Conserved 67356101 130 108148929
chr15 67358576 67360307 ZNF143 GTRD no Epithelial (MCF-7) 67356101 2475 108148930
chr15 67358600 67360158 ZNF143 GTRD no Epithelial (MCF-7) 67356101 2499 108148931
chr15 67358853 67360090 ZNF143 GTRD no Epithelial (MCF-7) 67356101 2752 108148932
chr15 67359020 67360309 ZNF143 GTRD no Epithelial (MCF-7) 67356101 2919 108148933
chr15 67359185 67360260 ZNF143 GTRD no Epithelial (MCF-7) 67356101 3084 108148934
chr15 67359283 67359939 ZNF274 GTRD no Liver (HepG2) 67356101 3182 108148935
chr15 67359386 67359986 ZNF274 GTRD no Liver (HepG2) 67356101 3285 108148936
chr15 67359412 67360000 ZBTB33 GTRD no Lung (A549) 67356101 3311 108148937
chr15 67359435 67359931 ZNF143 GTRD no Epithelial (MCF-7) 67356101 3334 108148938
chr15 67359435 67360219 ZNF143 GTRD no Epithelial (MCF-7) 67356101 3334 108148939
chr15 67359448 67360031 ZNF143 GTRD no Epithelial (MCF-7) 67356101 3347 108148940
chr15 67359499 67360180 ZNF143 GTRD no Epithelial (MCF-7) 67356101 3398 108148941
chr15 67359530 67360059 ZNF143 GTRD no Epithelial (MCF-7) 67356101 3429 108148942
chr15 67359561 67360376 ZNF143 GTRD no Epithelial (MCF-7) 67356101 3460 108148943
chr15 67359599 67360239 ZNF143 GTRD no Epithelial (MCF-7) 67356101 3498 108148944
chr15 67359624 67360099 ZNF143 GTRD no Epithelial (MCF-7) 67356101 3523 108148945
chr15 67359718 67360218 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 67356101 3617 108148946
chr15 67359867 67360035 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 67356101 3766 108148947
chr15 67359894 67360330 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 67356101 3793 108148948
chr15 67359911 67359920 SNAI2 JASPAR yes 67356101 3810 70545467
chr15 67359912 67359917 USF2 TRANSFAC yes 67356101 3811 70545468
chr15 67359916 67359927 TFAP2A JASPAR yes 67356101 3815 70545469
chr15 67359916 67359927 TFAP2C JASPAR yes 67356101 3815 70545470
chr15 67359916 67359928 INSM1 JASPAR yes 67356101 3815 70545471
chr15 67359922 67359926 LFA1 TRANSFAC yes 67356101 3821 70545472
chr15 67359925 67359930 MYC TRANSFAC yes 67356101 3824 70545473
chr15 67359934 67359953 PAX5 JASPAR yes 67356101 3833 70545474
chr15 67359961 67359967 SOX10 JASPAR yes 67356101 3860 70545475
chr15 67359966 67359978 TAL1 JASPAR yes 67356101 3865 70545476
chr15 67359967 67359980 ZBTB18 JASPAR yes 67356101 3866 70545477
chr15 67359968 67359978 MYF6 JASPAR yes 67356101 3867 70545478
chr15 67359968 67359978 NEUROG2 JASPAR yes 67356101 3867 70545479
chr15 67359968 67359980 TAL1 JASPAR yes 67356101 3867 70545480
chr15 67359973 67359977 NFE TRANSFAC yes 67356101 3872 70545481
chr15 67359975 67359990 RFX5 JASPAR yes 67356101 3874 70545482
chr15 67359990 67359994 LFA1 TRANSFAC yes 67356101 3889 70545483
chr15 67360013 67360031 SRF JASPAR yes 67356101 3912 70545484
chr15 67360014 67360026 SRF JASPAR yes 67356101 3913 70545485
chr15 67360016 67360028 BHLHE23 JASPAR yes 67356101 3915 70545486
chr15 67360017 67360027 BHLHE22 JASPAR yes 67356101 3916 70545487
chr15 67360017 67360027 NEUROD2 JASPAR yes 67356101 3916 70545488
chr15 67360017 67360027 OLIG1 JASPAR yes 67356101 3916 70545489
chr15 67360017 67360027 OLIG2 JASPAR yes 67356101 3916 70545490
chr15 67360017 67360027 OLIG3 JASPAR yes 67356101 3916 70545491
chr15 67360017 67360029 TAL1 JASPAR yes 67356101 3916 70545492
chr15 67360020 67360034 E2F7 JASPAR yes 67356101 3919 70545493
chr15 67360024 67360029 SP1 TRANSFAC yes 67356101 3923 70545494
chr15 67360033 67360043 HINFP JASPAR yes 67356101 3932 70545495
chr15 67360051 67360054 MYB TRANSFAC yes 67356101 3950 70545496
chr15 67360058 67360064 ZNF354C JASPAR yes 67356101 3957 70545497
chr15 67360076 67360086 SP1 JASPAR yes 67356101 3975 70545498
chr15 67360076 67360097 ZNF263 JASPAR yes 67356101 3975 70545499
chr15 67360078 67360084 MAZ TRANSFAC yes 67356101 3977 70545500
chr15 67360078 67360089 E2F6 JASPAR yes 67356101 3977 70545501
chr15 67360082 67360087 ETS2 TRANSFAC yes 67356101 3981 70545502
chr15 67360086 67360091 SP1 TRANSFAC yes 67356101 3985 70545503
chr15 67360096 67360100 NFE TRANSFAC yes 67356101 3995 70545504
chr15 67360101 67360106 TFAP2A TRANSFAC yes 67356101 4000 70545505
chr15 67360101 67360107 MZF1 JASPAR yes 67356101 4000 70545506
chr15 67360101 67360537 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 67356101 4000 108148949
chr15 67360103 67360108 ETS2 TRANSFAC yes 67356101 4002 70545507
chr15 67360103 67360539 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 67356101 4002 108148950
chr15 67360120 67360364 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 67356101 4019 108148951
chr15 67360142 67360552 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 67356101 4041 108148952
chr15 67360148 67360168 RREB1 JASPAR yes 67356101 4047 70545508
chr15 67360152 67360162 SREBF1 JASPAR yes 67356101 4051 70545509
chr15 67360152 67360162 SREBF2 JASPAR yes 67356101 4051 70545510
chr15 67360152 67360163 TBX20 JASPAR yes 67356101 4051 70545511
chr15 67360153 67360161 MGA JASPAR yes 67356101 4052 70545512
chr15 67360153 67360170 ZNF410 JASPAR yes 67356101 4052 70545513
chr15 67360157 67360167 SREBF1 JASPAR yes 67356101 4056 70545514
chr15 67360157 67360167 SREBF2 JASPAR yes 67356101 4056 70545515
chr15 67360161 67360181 ESR1 JASPAR yes 67356101 4060 70545516
chr15 67360164 67360182 ESR2 JASPAR yes 67356101 4063 70545517
chr15 67360165 67360183 ESR1 JASPAR yes 67356101 4064 70545518
chr15 67360165 67360183 ESR2 JASPAR yes 67356101 4064 70545519
chr15 67360166 67360181 ESR2 JASPAR yes 67356101 4065 70545520
chr15 67360166 67360186 ESR1 JASPAR yes 67356101 4065 70545521
chr15 67360167 67360171 ESR1 TRANSFAC yes 67356101 4066 70545522
chr15 67360209 67360479 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 67356101 4108 108148953
chr15 67360219 67360224 ETS2 TRANSFAC yes 67356101 4118 70545523
chr15 67360222 67360228 ETS1 JASPAR yes 67356101 4121 70545524
chr15 67360222 67360228 SPI1 JASPAR yes 67356101 4121 70545525
chr15 67360227 67360237 ZNF740 JASPAR yes 67356101 4126 70545526
chr15 67360230 67360245 RFX5 JASPAR yes 67356101 4129 70545527
chr15 67360231 67360245 PLAG1 JASPAR yes 67356101 4130 70545528
chr15 67360250 67360258 FOXC1 JASPAR yes 67356101 4149 70545529
chr15 67360263 67360879 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 67356101 4162 108148954
chr15 67360273 67360278 TFAP2A TRANSFAC yes 67356101 4172 70545530
chr15 67360273 67360279 MZF1 JASPAR yes 67356101 4172 70545531
chr15 67360273 67360283 SP1 JASPAR yes 67356101 4172 70545532
chr15 67360275 67360281 MAZ TRANSFAC yes 67356101 4174 70545533
chr15 67360285 67360291 NFIC JASPAR yes 67356101 4184 70545534
SNPs associated with SMAD3[ENSG00000166949.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr15 67218328 rs16950350 C T 137773 Esophagus 0.277383 4042025
chr15 68195035 rs8032153 T C 707502 Heart 0.276578 4047614
chr15 66363280 rs72744409 G A 992821 Breast 0.0967631 4034792
chr15 66587041 rs7164875 G C 769060 Spleen 0.286649 4036347
chr15 67485667 rs3743342 C T 0 Ovary 0.280266 4044805
chr15 67466599 rs72743482 A G 0 Thyroid 9.76739e-17 4044580
chr15 67249155 rs266288 T C 106946 Liver 0.175881 4042477
chr15 67402508 rs189924557 G T 0 Lung 0.189015 4043966
chr15 66963967 rs12904808 A G 392134 Stomach 0.296704 4038825
chr15 67468659 rs117009032 G A 0 Adrenal 0.408162 4044615
Details of SMAD3[ENSG00000166949.11]
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Genomic Location chr15:67356101-67487533[+]
TSS 67356101
Gene Name SMAD3
Ensembl ID ENSG00000166949.11
ENTREZID 4088
Uniprot
Q9P0T0
A0A024R5Z3
P84022
Protein Name
Mothers against decapentaplegic homolog
Mothers against decapentaplegic homolog 3
Expression levels of SMAD3[ENSG00000166949.11]
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