EnhancerDB
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Enhancers that regulate KRT17[ENSG00000128422.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 39682585 39682843 vista24777 39781094 98251
VISTA
chr17 39683248 39683750 vista24778 39781094 97344
VISTA
chr17 39685394 39685532 vista24779 39781094 95562
VISTA
chr17 39686458 39686891 vista24780 39781094 94203
VISTA
chr17 39688905 39708275 enh17150 39781094 72819
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
chr17 39692337 39692600 vista24781 39781094 88494
VISTA
chr17 39695431 39695775 vista24782 39781094 85319
VISTA
chr17 39703664 39703881 vista24783 39781094 77213
VISTA
chr17 39703962 39704520 vista24784 39781094 76574
VISTA
chr17 39705098 39705383 vista24785 39781094 75711
VISTA
chr17 39709405 39718015 enh108667 39781094 63079
Cervix (HeLa-S3) Lung (PC-9)
chr17 39713397 39713795 vista24786 39781094 67299
VISTA
chr17 39731035 39738439 enh17151 39781094 42655
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Placenta Pancreas (Panc1) Epithelial (MCF-7)
chr17 39735892 39736012 vista24787 39781094 45082
VISTA
chr17 39749784 39750088 vista24788 39781094 31006
VISTA
chr17 39782029 39782271 vista24789 39781094 935
VISTA
chr17 39787972 39794055 enh69273 39781094 6878
Cervix (HeLa-S3) Brain (SK-N-SH) Ovary Muscle (A673) Neural Stem Cells (H9)
chr17 39800139 39815735 enh17152 39781094 19045
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Lung (A549) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
chr17 39802138 39802335 vista24790 39781094 21044
VISTA
chr17 39807728 39808143 vista24791 39781094 26634
VISTA
chr17 39810156 39810822 vista24792 39781094 29062
VISTA
chr17 39811785 39812247 vista24793 39781094 30691
VISTA
chr17 39816776 39838995 enh4409 39781094 35682
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
chr17 39822130 39822941 vista24794 39781094 41036
VISTA
chr17 39823354 39823685 vista24795 39781094 42260
VISTA
chr17 39824125 39824441 vista24796 39781094 43031
VISTA
chr17 39828583 39828768 vista24797 39781094 47489
VISTA
chr17 39829419 39829739 vista24798 39781094 48325
VISTA
chr17 39832714 39833014 vista24799 39781094 51620
VISTA
chr17 39835188 39835696 vista24800 39781094 54094
VISTA
chr17 39847049 39856155 enh17153 39781094 65955
Bone Marrow (K562) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Adrenal Pancreas Spleen Uterus Heart
chr17 39861814 39861964 vista24801 39781094 80720
VISTA
Transcript facotrs that regulate KRT17[ENSG00000128422.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 39780561 39783418 ZNF274 GTRD no Blood (GM12878) 39781094 533 108259157
chr17 39780704 39782824 ZNF274 GTRD no Blood (GM12878) 39781094 390 108259158
chr17 39780829 39782052 ZNF274 GTRD no Blood (GM12878) 39781094 265 108259159
chr17 39781307 39782118 ZNF143 GTRD no Epithelial (MCF-7) 39781094 213 108259160
chr17 39781335 39782083 ZNF143 GTRD no Epithelial (MCF-7) 39781094 241 108259161
chr17 39781455 39782082 ZNF143 GTRD no Epithelial (MCF-7) 39781094 361 108259162
chr17 39781526 39782036 ZNF143 GTRD no Epithelial (MCF-7) 39781094 432 108259163
chr17 39781587 39782044 ZNF143 GTRD no Epithelial (MCF-7) 39781094 493 108259164
chr17 39781816 39782280 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 39781094 722 108259165
chr17 39781836 39782232 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 39781094 742 108259166
chr17 39781907 39782165 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 39781094 813 108259167
chr17 39782007 39783355 ZNF274 GTRD no Bone Marrow (K562) 39781094 913 108259168
chr17 39782016 39783643 P63 GTRD no Skin (Keratinocyte) 39781094 922 108259169
chr17 39782021 39783503 P63 GTRD no Skin (Keratinocyte) 39781094 927 108259170
chr17 39782041 39782047 NFIC JASPAR yes 39781094 947 21238679
chr17 39782044 39783049 P63 GTRD no Skin (Keratinocyte) 39781094 950 108259171
chr17 39782044 39783286 AR GTRD no Prostate (PC-3) 39781094 950 108259172
chr17 39782052 39782063 FOXA1 JASPAR yes 39781094 958 21238680
chr17 39782052 39782067 FOXA1 JASPAR yes 39781094 958 21238681
chr17 39782059 39782070 SPDEF JASPAR yes 39781094 965 21238682
chr17 39782095 39782103 SP1 TRANSFAC yes 39781094 1001 21238683
chr17 39782095 39782105 SP1 JASPAR yes 39781094 1001 21238684
chr17 39782096 39782102 SP1 TRANSFAC yes 39781094 1002 21238685
chr17 39782096 39782106 SP1 JASPAR yes 39781094 1002 21238686
chr17 39782096 39782116 RREB1 JASPAR yes 39781094 1002 21238687
chr17 39782097 39782104 SP1 TRANSFAC yes 39781094 1003 21238688
chr17 39782098 39782103 SP1 TRANSFAC yes 39781094 1004 21238689
chr17 39782098 39782104 SP1 TRANSFAC yes 39781094 1004 21238690
chr17 39782098 39782118 RREB1 JASPAR yes 39781094 1004 21238691
chr17 39782100 39782120 RREB1 JASPAR yes 39781094 1006 21238692
chr17 39782101 39782115 PLAG1 JASPAR yes 39781094 1007 21238693
chr17 39782122 39782126 LFA1 TRANSFAC yes 39781094 1028 21238694
chr17 39782150 39782161 NFE2L2 JASPAR yes 39781094 1056 21238695
chr17 39782153 39782159 ATF1 TRANSFAC yes 39781094 1059 21238696
chr17 39782172 39782186 PAX6 JASPAR yes 39781094 1078 21238697
chr17 39782207 39782217 SP1 TRANSFAC yes 39781094 1113 21238698
chr17 39782208 39782214 SP1 TRANSFAC yes 39781094 1114 21238699
chr17 39782208 39782218 SP1 JASPAR yes 39781094 1114 21238700
chr17 39782208 39782228 RREB1 JASPAR yes 39781094 1114 21238701
chr17 39782209 39782219 ZNF740 JASPAR yes 39781094 1115 21238702
chr17 39782212 39782218 MZF1 JASPAR yes 39781094 1118 21238703
chr17 39782214 39782235 ZNF263 JASPAR yes 39781094 1120 21238704
chr17 39782217 39782227 SP1 JASPAR yes 39781094 1123 21238705
chr17 39782226 39782247 ZNF263 JASPAR yes 39781094 1132 21238706
chr17 39782246 39782251 SP1 TRANSFAC yes 39781094 1152 21238707
chr17 39782248 39782257 TFAP2A JASPAR yes 39781094 1154 21238708
chr17 39782252 39783128 P63 GTRD no Skin (Keratinocyte) 39781094 1158 108259173
chr17 39782265 39782972 ZNF274 GTRD no Bone Marrow (K562) 39781094 1171 108259174
SNPs associated with KRT17[ENSG00000128422.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 39815461 rs7222590 G A 34367 Esophagus 0.115689 4874242
chr17 39820095 rs76666366 T C 39001 Esophagus 0.382023 4874297
chr17 39792796 rs761465925 TC T 11702 Heart 0.337835 4874001
chr17 40565916 rs72823055 G T 784822 Pancreas 0.355566 4878549
chr17 40606073 rs111966005 G A 824979 Spleen 0.0645213 4878966
chr17 39833952 rs147585569 G A 52858 Uterus 0.148274 4874569
chr17 40202189 rs796304886 GAAC G 421095 Thyroid 0.130138 4876251
Details of KRT17[ENSG00000128422.11]
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Genomic Location chr17:39775689-39781094[-]
TSS 39781094
Gene Name KRT17
Ensembl ID ENSG00000128422.11
ENTREZID 3872
Uniprot
Q14666
Q04695
Protein Name
type I cytoskeletal 17
Keratin
Expression levels of KRT17[ENSG00000128422.11]
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