EnhancerDB
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Enhancers that regulate FARSA[ENSG00000179115.6]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 12947043 12947383 vista28661 13044851 97468
VISTA
chr19 12957682 12957886 vista28662 13044851 86965
VISTA
chr19 12994554 12994766 vista28663 13044851 50085
VISTA
chr19 13006078 13006409 vista28664 13044851 38442
VISTA
chr19 13017585 13022255 enh104516 13044851 22596
Peripheral Blood (MM.1S) Stomach
chr19 13023589 13024232 vista28665 13044851 20619
VISTA
chr19 13024998 13025376 vista28666 13044851 19475
VISTA
chr19 13048278 13048689 vista28667 13044851 3427
VISTA
chr19 13058519 13066495 enh5014 13044851 13668
Muscle (Myoblast) Blood (Karpas-422)
chr19 13086745 13090915 enh88370 13044851 41894
Pancreas Pancreas (Panc1) Ovary
chr19 13092201 13100895 enh32889 13044851 47350
Bone Marrow (K562) Prostate (RWPE1) Astrocyte Stomach Peripheral Blood (MM.1S) Pancreas Heart
chr19 13094405 13094796 vista28668 13044851 49554
VISTA
chr19 13095998 13096573 vista28669 13044851 51147
VISTA
chr19 13107426 13115175 enh32890 13044851 62575
Astrocyte Bone (Osteoblast) Lung Pancreas Stomach
chr19 13113447 13113871 vista28670 13044851 68596
VISTA
chr19 13115737 13122542 enh88371 13044851 70886
Pancreas Thyroid Prostate (RWPE1)
chr19 13123441 13132975 enh17928 13044851 78590
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Esophagus Bone (Osteoblast) Placenta Muscle (Myoblast) Heart
chr19 13123653 13124120 vista28671 13044851 78802
VISTA
chr19 13125867 13126278 vista28672 13044851 81016
VISTA
chr19 13129050 13129163 vista28673 13044851 84199
VISTA
chr19 13133010 13133371 vista28674 13044851 88159
VISTA
chr19 13137197 13137461 vista28675 13044851 92346
VISTA
chr19 13138013 13138252 vista28676 13044851 93162
VISTA
chr19 13138760 13157647 enh17929 13044851 93909
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr19 13140737 13141121 vista28677 13044851 95886
VISTA
chr19 13143095 13143350 vista28678 13044851 98244
VISTA
chr19 13144758 13144905 vista28679 13044851 99907
VISTA
Transcript facotrs that regulate FARSA[ENSG00000179115.6]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 13048111 13048401 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 13044851 3260 108387048
chr19 13048112 13048402 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 13044851 3261 108387049
chr19 13048114 13048394 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 13044851 3263 108387050
chr19 13048123 13048499 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 13044851 3272 108387051
chr19 13048135 13048475 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 13044851 3284 108387052
chr19 13048137 13048527 MAX UCSC Txn Factor no Conserved 13044851 3286 108387053
chr19 13048137 13048527 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 13044851 3286 108387054
chr19 13048155 13048431 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 13044851 3304 108387055
chr19 13048155 13048539 USF1 UCSC Txn Factor no Conserved 13044851 3304 108387056
chr19 13048155 13048539 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 13044851 3304 108387057
chr19 13048165 13048495 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 13044851 3314 108387058
chr19 13048184 13048494 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 13044851 3333 108387059
chr19 13048193 13048523 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 13044851 3342 108387060
chr19 13048196 13048472 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 13044851 3345 108387061
chr19 13048199 13048384 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 13044851 3348 108387062
chr19 13048199 13048475 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 13044851 3348 108387063
chr19 13048217 13048473 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 13044851 3366 108387064
chr19 13048223 13048459 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 13044851 3372 108387065
chr19 13048226 13048476 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 13044851 3375 108387066
chr19 13048240 13048398 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 13044851 3389 108387067
chr19 13048244 13048440 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 13044851 3393 108387068
chr19 13048245 13048436 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 13044851 3394 108387069
chr19 13048278 13048288 NFKB1 JASPAR yes 13044851 3427 70807132
chr19 13048278 13048288 RELA JASPAR yes 13044851 3427 70807133
chr19 13048278 13048288 REL JASPAR yes 13044851 3427 70807134
chr19 13048278 13048289 NFKB1 JASPAR yes 13044851 3427 70807135
chr19 13048279 13048289 REL JASPAR yes 13044851 3428 70807136
chr19 13048283 13048304 ZNF263 JASPAR yes 13044851 3432 70807137
chr19 13048294 13048308 SPI1 JASPAR yes 13044851 3443 70807138
chr19 13048295 13048303 EHF JASPAR yes 13044851 3444 70807139
chr19 13048299 13048603 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 13044851 3448 108387070
chr19 13048316 13048326 SP1 JASPAR yes 13044851 3465 70807140
chr19 13048317 13048327 SP1 JASPAR yes 13044851 3466 70807141
chr19 13048318 13048322 LFA1 TRANSFAC yes 13044851 3467 70807142
chr19 13048329 13048342 SMAD2 JASPAR yes 13044851 3478 70807143
chr19 13048336 13048346 MAX JASPAR yes 13044851 3485 70807144
chr19 13048336 13048347 USF1 JASPAR yes 13044851 3485 70807145
chr19 13048336 13048347 USF2 JASPAR yes 13044851 3485 70807146
chr19 13048336 13048348 HES7 JASPAR yes 13044851 3485 70807147
chr19 13048337 13048347 BHLHE40 JASPAR yes 13044851 3486 70807148
chr19 13048337 13048347 BHLHE41 JASPAR yes 13044851 3486 70807149
chr19 13048337 13048347 HEY1 JASPAR yes 13044851 3486 70807150
chr19 13048337 13048347 HEY2 JASPAR yes 13044851 3486 70807151
chr19 13048337 13048347 MLXIPL JASPAR yes 13044851 3486 70807152
chr19 13048337 13048347 MLX JASPAR yes 13044851 3486 70807153
chr19 13048337 13048347 MNT JASPAR yes 13044851 3486 70807154
chr19 13048337 13048347 TFE3 JASPAR yes 13044851 3486 70807155
chr19 13048337 13048347 TFEB JASPAR yes 13044851 3486 70807156
chr19 13048337 13048347 TFEC JASPAR yes 13044851 3486 70807157
chr19 13048337 13048348 USF2 JASPAR yes 13044851 3486 70807158
chr19 13048338 13048348 MAX JASPAR yes 13044851 3487 70807159
chr19 13048339 13048344 MYC TRANSFAC yes 13044851 3488 70807160
chr19 13048339 13048344 USF1 TRANSFAC yes 13044851 3488 70807161
chr19 13048339 13048344 USF2 TRANSFAC yes 13044851 3488 70807162
chr19 13048343 13048354 TFAP2C JASPAR yes 13044851 3492 70807163
chr19 13048359 13048374 HSF1 JASPAR yes 13044851 3508 70807164
chr19 13048360 13048373 HSF1 JASPAR yes 13044851 3509 70807165
chr19 13048360 13048373 HSF4 JASPAR yes 13044851 3509 70807166
chr19 13048369 13048389 RREB1 JASPAR yes 13044851 3518 70807167
chr19 13048373 13048388 NR2C2 JASPAR yes 13044851 3522 70807168
chr19 13048380 13048390 SP1 JASPAR yes 13044851 3529 70807169
chr19 13048381 13048391 SP1 JASPAR yes 13044851 3530 70807170
chr19 13048384 13048389 SP1 TRANSFAC yes 13044851 3533 70807171
chr19 13048388 13048392 H4TF2 TRANSFAC yes 13044851 3537 70807172
chr19 13048421 13048433 TAL1 JASPAR yes 13044851 3570 70807173
chr19 13048437 13048448 E2F6 JASPAR yes 13044851 3586 70807174
chr19 13048444 13048450 MZF1 JASPAR yes 13044851 3593 70807175
chr19 13048447 13050609 POLR2A UCSC Txn Factor no Conserved 13044851 3596 108387071
chr19 13048455 13048467 INSM1 JASPAR yes 13044851 3604 70807176
chr19 13048455 13048470 NR2C2 JASPAR yes 13044851 3604 70807177
chr19 13048482 13048492 BARHL2 JASPAR yes 13044851 3631 70807178
chr19 13048485 13048495 HOXB13 JASPAR yes 13044851 3634 70807179
chr19 13048485 13048495 HOXD13 JASPAR yes 13044851 3634 70807180
chr19 13048485 13048496 HOXA10 JASPAR yes 13044851 3634 70807181
chr19 13048486 13048496 ALX3 JASPAR yes 13044851 3635 70807182
chr19 13048486 13048496 GSX2 JASPAR yes 13044851 3635 70807183
chr19 13048486 13048496 MNX1 JASPAR yes 13044851 3635 70807184
chr19 13048487 13048495 BARX1 JASPAR yes 13044851 3636 70807185
chr19 13048487 13048495 BSX JASPAR yes 13044851 3636 70807186
chr19 13048487 13048495 ISL2 JASPAR yes 13044851 3636 70807187
chr19 13048487 13048495 LMX1B JASPAR yes 13044851 3636 70807188
chr19 13048487 13048495 MSX1 JASPAR yes 13044851 3636 70807189
chr19 13048487 13048495 MSX2 JASPAR yes 13044851 3636 70807190
chr19 13048490 13048501 CEBPA JASPAR yes 13044851 3639 70807191
chr19 13048507 13048519 E2F8 JASPAR yes 13044851 3656 70807192
chr19 13048512 13048533 REST JASPAR yes 13044851 3661 70807193
chr19 13048513 13048532 REST JASPAR yes 13044851 3662 70807194
chr19 13048515 13048527 ZBTB7C JASPAR yes 13044851 3664 70807195
chr19 13048515 13048530 RUNX2 JASPAR yes 13044851 3664 70807196
chr19 13048516 13048526 RUNX3 JASPAR yes 13044851 3665 70807197
chr19 13048528 13048540 ZBTB7B JASPAR yes 13044851 3677 70807198
chr19 13048528 13048540 ZBTB7C JASPAR yes 13044851 3677 70807199
chr19 13048539 13048543 YY1 TRANSFAC yes 13044851 3688 70807200
chr19 13048547 13048564 RXRA JASPAR yes 13044851 3696 70807201
chr19 13048547 13048568 ZNF263 JASPAR yes 13044851 3696 70807202
chr19 13048553 13048560 CEBPA TRANSFAC yes 13044851 3702 70807203
chr19 13048556 13048570 PLAG1 JASPAR yes 13044851 3705 70807204
chr19 13048556 13048571 NR2C2 JASPAR yes 13044851 3705 70807205
chr19 13048557 13048571 RXRB JASPAR yes 13044851 3706 70807206
chr19 13048566 13048571 SP1 TRANSFAC yes 13044851 3715 70807207
chr19 13048587 13048590 MYB TRANSFAC yes 13044851 3736 70807208
chr19 13048592 13048596 NFE TRANSFAC yes 13044851 3741 70807209
chr19 13048593 13048598 GATA2 JASPAR yes 13044851 3742 70807210
chr19 13048595 13048601 MZF1 JASPAR yes 13044851 3744 70807211
chr19 13048602 13049038 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 13044851 3751 108387072
chr19 13048629 13048637 EHF JASPAR yes 13044851 3778 70807212
chr19 13048635 13049165 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 13044851 3784 108387073
chr19 13048642 13049158 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 13044851 3791 108387074
chr19 13048674 13048678 YY1 TRANSFAC yes 13044851 3823 70807213
SNPs associated with FARSA[ENSG00000179115.6], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr19 13032302 rs397952646 T TG 991 Esophagus 0.00144537 5447405
chr19 13212214 rs1003393 C T 167363 Heart 0.153709 5448803
chr19 13002400 rs1799918 G C 30893 Lung 8.00266e-05 5447224
chr19 13095195 rs56013747 A C 50344 Stomach 0.192508 5447736
Details of FARSA[ENSG00000179115.6]
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Genomic Location chr19:13033293-13044851[-]
TSS 13044851
Gene Name FARSA
Ensembl ID ENSG00000179115.6
ENTREZID 2193
Uniprot
Q9Y285
Q6IBR2
Protein Name
Phenylalanine--tRNA ligase alpha subunit
Expression levels of FARSA[ENSG00000179115.6]
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