EnhancerDB
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Enhancers that regulate FAM76A[ENSG00000009780.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 27947965 27960295 enh177 28052490 92195
Blood (OCI-LY7) Blood (Karpas-422) Uterus Blood (T-cell) Heart
chr1 27957478 27958684 vista939 28052490 93806
VISTA
chr1 27959091 27959724 vista940 28052490 92766
VISTA
chr1 27959966 27960344 vista941 28052490 92146
VISTA
chr1 27963400 27963974 vista942 28052490 88516
VISTA
chr1 27968485 27992074 enh178 28052490 60416
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 27971483 27971662 vista943 28052490 80828
VISTA
chr1 27973679 27973995 vista944 28052490 78495
VISTA
chr1 27976905 27977430 vista945 28052490 75060
VISTA
chr1 27979244 27979520 vista946 28052490 72970
VISTA
chr1 27982664 27982914 vista947 28052490 69576
VISTA
chr1 27985480 27985709 vista948 28052490 66781
VISTA
chr1 27985869 27985982 vista949 28052490 66508
VISTA
chr1 27986111 27986384 vista950 28052490 66106
VISTA
chr1 28006925 28018534 enh11669 28052490 33956
Liver (HepG2) Prostate (RWPE1) Large Intestine Bone (Osteoblast) Stomach Placenta Muscle (Myotube) Epithelial (MCF-7)
chr1 28011929 28012287 vista951 28052490 40203
VISTA
chr1 28020425 28025555 enh11670 28052490 26935
Placenta
chr1 28037005 28044315 enh11671 28052490 8175
Placenta Peripheral Blood (MM.1S) Stomach
chr1 28050414 28050762 vista952 28052490 1728
VISTA
chr1 28077005 28081155 enh103008 28052490 24515
Peripheral Blood (MM.1S)
chr1 28098635 28098880 vista953 28052490 46145
VISTA
chr1 28102645 28115035 enh11672 28052490 50155
Cervix (HeLa-S3) Large Intestine Esophagus Thyroid Placenta Lung (PC-9) Pancreas Stomach
chr1 28120225 28124375 enh78985 28052490 67735
Prostate (PC-3)
chr1 28143878 28144081 vista954 28052490 91388
VISTA
Transcript facotrs that regulate FAM76A[ENSG00000009780.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 28050428 28050432 NFE TRANSFAC yes 28052490 2058 118260193
chr1 28050428 28050433 GATA1 TRANSFAC yes 28052490 2057 118260194
chr1 28050428 28050434 GATA3 JASPAR yes 28052490 2056 118260195
chr1 28050444 28050448 YY1 TRANSFAC yes 28052490 2042 118260196
chr1 28050470 28050479 VENTX JASPAR yes 28052490 2011 118260197
chr1 28050470 28050480 GSX2 JASPAR yes 28052490 2010 118260198
chr1 28050471 28050479 BSX JASPAR yes 28052490 2011 118260199
chr1 28050471 28050481 HOXB13 JASPAR yes 28052490 2009 118260200
chr1 28050471 28050481 HOXD13 JASPAR yes 28052490 2009 118260201
chr1 28050473 28050477 YY1 TRANSFAC yes 28052490 2013 118260202
chr1 28050475 28050484 SRY JASPAR yes 28052490 2006 118260203
chr1 28050484 28050505 ZNF263 JASPAR yes 28052490 1985 118260204
chr1 28050485 28050491 MZF1 JASPAR yes 28052490 1999 118260205
chr1 28050491 28050495 YY1 TRANSFAC yes 28052490 1995 118260206
chr1 28050505 28050520 FOXP1 JASPAR yes 28052490 1970 118260207
chr1 28050507 28050522 FOXP1 JASPAR yes 28052490 1968 118260208
chr1 28050510 28050520 HOXB13 JASPAR yes 28052490 1970 118260209
chr1 28050511 28050523 FOXI1 JASPAR yes 28052490 1967 118260210
chr1 28050512 28050524 FOXC2 JASPAR yes 28052490 1966 118260211
chr1 28050512 28050525 POU2F2 JASPAR yes 28052490 1965 118260212
chr1 28050514 28050518 YY1 TRANSFAC yes 28052490 1972 118260213
chr1 28050516 28050531 FOXA1 JASPAR yes 28052490 1959 118260214
chr1 28050518 28050531 POU2F2 JASPAR yes 28052490 1959 118260215
chr1 28050518 28050532 POU1F1 JASPAR yes 28052490 1958 118260216
chr1 28050519 28050531 POU3F1 JASPAR yes 28052490 1959 118260217
chr1 28050519 28050531 POU3F2 JASPAR yes 28052490 1959 118260218
chr1 28050519 28050532 POU3F3 JASPAR yes 28052490 1958 118260219
chr1 28050520 28050524 YY1 TRANSFAC yes 28052490 1966 118260220
chr1 28050520 28050531 FOXA1 JASPAR yes 28052490 1959 118260221
chr1 28050520 28050532 POU2F1 JASPAR yes 28052490 1958 118260222
chr1 28050521 28050528 POU2F1 TRANSFAC yes 28052490 1962 118260223
chr1 28050521 28050528 POU2F2C TRANSFAC yes 28052490 1962 118260224
chr1 28050521 28050528 POU2F2 TRANSFAC yes 28052490 1962 118260225
chr1 28050521 28050529 POU2F1 TRANSFAC yes 28052490 1961 118260226
chr1 28050521 28050530 POU3F4 JASPAR yes 28052490 1960 118260227
chr1 28050521 28050530 POU5F1B JASPAR yes 28052490 1960 118260228
chr1 28050528 28050543 MEF2A JASPAR yes 28052490 1947 118260229
chr1 28050529 28050544 MEF2C JASPAR yes 28052490 1946 118260230
chr1 28050532 28050536 YY1 TRANSFAC yes 28052490 1954 118260231
chr1 28050550 28050563 SMAD2 JASPAR yes 28052490 1927 118260232
chr1 28050554 28050558 NFE TRANSFAC yes 28052490 1932 118260233
chr1 28050588 28050600 TFAP2A JASPAR yes 28052490 1890 118260234
chr1 28050588 28050600 TFAP2B JASPAR yes 28052490 1890 118260235
chr1 28050588 28050600 TFAP2C JASPAR yes 28052490 1890 118260236
chr1 28050592 28050601 THAP1 JASPAR yes 28052490 1889 118260237
chr1 28050595 28050599 LFA1 TRANSFAC yes 28052490 1891 118260238
chr1 28050607 28050611 NFE TRANSFAC yes 28052490 1879 118260239
chr1 28050614 28050625 EBF1 JASPAR yes 28052490 1865 118260240
chr1 28050625 28050636 E2F4 JASPAR yes 28052490 1854 118260241
chr1 28050625 28050636 E2F6 JASPAR yes 28052490 1854 118260242
chr1 28050626 28050637 E2F1 JASPAR yes 28052490 1853 118260243
chr1 28050635 28051546 TEF1 GTRD no Bone (Osteoblast) 28052490 944 107802616
chr1 28050661 28050673 HES7 JASPAR yes 28052490 1817 118260244
chr1 28050681 28050696 HNF1A JASPAR yes 28052490 1794 118260245
chr1 28050682 28050695 HNF1B JASPAR yes 28052490 1795 118260246
chr1 28050691 28050697 TBP TRANSFAC yes 28052490 1793 118260247
chr1 28050708 28050714 HiNF-A TRANSFAC yes 28052490 1776 118260248
chr1 28050716 28050720 H4TF2 TRANSFAC yes 28052490 1770 118260249
chr1 28050735 28050756 IRF1 JASPAR yes 28052490 1734 118260250
chr1 28050737 28050758 IRF1 JASPAR yes 28052490 1732 118260251
chr1 28050738 28050759 IRF1 JASPAR yes 28052490 1731 118260252
chr1 28050739 28050760 IRF1 JASPAR yes 28052490 1730 118260253
chr1 28050740 28050755 FOXP1 JASPAR yes 28052490 1735 118260254
chr1 28050742 28050757 FOXP1 JASPAR yes 28052490 1733 118260255
chr1 28050743 28050758 FOXP1 JASPAR yes 28052490 1732 118260256
chr1 28050744 28050759 FOXP1 JASPAR yes 28052490 1731 118260257
chr1 28050745 28050760 FOXP1 JASPAR yes 28052490 1730 118260258
chr1 28050746 28050761 FOXP1 JASPAR yes 28052490 1729 118260259
chr1 28050747 28050762 FOXP1 JASPAR yes 28052490 1728 118260260
SNPs associated with FAM76A[ENSG00000009780.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 28912397 rs139411730 T C 822764 Esophagus 0.130647 193354
chr1 27833875 rs145032500 G A 218615 Heart 0.32393 186444
chr1 27990938 rs75951091 G A 61552 Heart 0.180263 187932
chr1 27676289 rs145411679 G C,T 376201 Breast 0.239262 185317
chr1 28214376 rs6686096 C T 124743 Spleen 0.251366 188901
chr1 27897911 rs149711187 C T 154579 Uterus 0.826481 187007
chr1 27936445 rs370001189 CGGA C 116045 Stomach 0.23642 187381
chr1 27295022 rs71636802 T C 757468 Adrenal 0.0858861 182986
Details of FAM76A[ENSG00000009780.11]
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Genomic Location chr1:28052490-28089633[+]
TSS 28052490
Gene Name FAM76A
Ensembl ID ENSG00000009780.11
ENTREZID 199870
Uniprot
Q8TAV0
Protein Name
Protein FAM76A
Expression levels of FAM76A[ENSG00000009780.11]
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