EnhancerDB
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Enhancers that regulate ZSWIM4[ENSG00000132003.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 13815020 13821075 enh89928 13906274 85199
Brain (SK-N-MC) Prostate (RWPE1)
chr19 13821572 13825722 enh65175 13906274 80552
Heart
chr19 13825961 13831869 enh69534 13906274 74405
Pancreas (Panc1) Prostate (PC-3) Neural Stem Cells (H9) Brain (SK-N-MC)
chr19 13843685 13848575 enh76110 13906274 57699
Muscle (A673) Lung (PC-9)
chr19 13851600 13855896 enh81490 13906274 50378
Prostate (PC-3) Prostate (RWPE1) Lung (PC-9)
chr19 13855893 13856042 vista28713 13906274 50232
VISTA
chr19 13889645 13898207 enh17933 13906274 8067
Cervix (HeLa-S3) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Stomach
chr19 13907523 13907866 vista28714 13906274 1249
VISTA
chr19 13917794 13918010 vista28715 13906274 11520
VISTA
chr19 13941465 13967615 enh5016 13906274 35191
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr19 13944151 13944331 vista28716 13906274 37877
VISTA
chr19 13944359 13944683 vista28717 13906274 38085
VISTA
chr19 13954357 13954714 vista28718 13906274 48083
VISTA
chr19 13955108 13955589 vista28719 13906274 48834
VISTA
chr19 13957204 13959386 vista28720 13906274 50930
VISTA
chr19 13959901 13960035 vista28721 13906274 53627
VISTA
chr19 13972364 13973309 vista28722 13906274 66090
VISTA
chr19 13975574 13976059 vista28723 13906274 69300
VISTA
chr19 13976745 13977653 vista28724 13906274 70471
VISTA
chr19 13981505 13986466 enh76111 13906274 75231
Muscle (A673) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1)
chr19 13993885 13998035 enh109827 13906274 87611
Stomach
chr19 13995440 13995781 vista28725 13906274 89166
VISTA
chr19 13995889 13996057 vista28726 13906274 89615
VISTA
chr19 13997855 13998026 vista28727 13906274 91581
VISTA
chr19 14006165 14013175 enh92829 13906274 99891
Liver (HepG2) Stomach
Transcript facotrs that regulate ZSWIM4[ENSG00000132003.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 13905136 13907705 ZNF143 GTRD no Epithelial (MCF-7) 13906274 1138 108389937
chr19 13905841 13907668 ZNF143 GTRD no Epithelial (MCF-7) 13906274 433 108389938
chr19 13907161 13907681 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 13906274 887 108389939
chr19 13907422 13907896 CTCF UCSC Txn Factor no Conserved 13906274 1148 108389940
chr19 13907445 13907809 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 13906274 1171 108389941
chr19 13907450 13908046 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 13906274 1176 108389942
chr19 13907468 13908128 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 13906274 1194 108389943
chr19 13907491 13907751 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 13906274 1217 108389944
chr19 13907503 13907813 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 13906274 1229 108389945
chr19 13907513 13907763 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 13906274 1239 108389946
chr19 13907516 13908200 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 13906274 1242 108389947
chr19 13907517 13908047 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 13906274 1243 108389948
chr19 13907524 13907531 PEA3 TRANSFAC yes 13906274 1250 70810111
chr19 13907525 13908041 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 13906274 1251 108389949
chr19 13907531 13907775 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 13906274 1257 108389950
chr19 13907534 13907790 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 13906274 1260 108389951
chr19 13907536 13907752 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 13906274 1262 108389952
chr19 13907537 13908041 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 13906274 1263 108389953
chr19 13907540 13908080 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 13906274 1266 108389954
chr19 13907541 13907546 SP1 TRANSFAC yes 13906274 1267 70810112
chr19 13907541 13907926 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 13906274 1267 108389955
chr19 13907542 13907952 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 13906274 1268 108389956
chr19 13907548 13908068 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 13906274 1274 108389957
chr19 13907561 13907575 PAX6 JASPAR yes 13906274 1287 70810113
chr19 13907561 13908081 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 13906274 1287 108389958
chr19 13907563 13907753 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 13906274 1289 108389959
chr19 13907570 13907582 GLI2 JASPAR yes 13906274 1296 70810114
chr19 13907578 13907589 EBF1 JASPAR yes 13906274 1304 70810115
chr19 13907584 13907589 ETS2 TRANSFAC yes 13906274 1310 70810116
chr19 13907585 13908021 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 13906274 1311 108389960
chr19 13907591 13907975 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 13906274 1317 108389961
chr19 13907608 13907872 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 13906274 1334 108389962
chr19 13907610 13907623 ELF1 JASPAR yes 13906274 1336 70810117
chr19 13907612 13907623 ELF5 JASPAR yes 13906274 1338 70810118
chr19 13907612 13907623 ETV2 JASPAR yes 13906274 1338 70810119
chr19 13907613 13907623 ERF JASPAR yes 13906274 1339 70810120
chr19 13907613 13907623 ETS1 JASPAR yes 13906274 1339 70810121
chr19 13907613 13907624 ELK4 JASPAR yes 13906274 1339 70810122
chr19 13907613 13907624 FLI1 JASPAR yes 13906274 1339 70810123
chr19 13907629 13907650 REST JASPAR yes 13906274 1355 70810124
chr19 13907633 13907637 NFE TRANSFAC yes 13906274 1359 70810125
chr19 13907634 13907639 GATA2 JASPAR yes 13906274 1360 70810126
chr19 13907640 13907644 NFE TRANSFAC yes 13906274 1366 70810127
chr19 13907655 13908011 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 13906274 1381 108389963
chr19 13907657 13907961 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 13906274 1383 108389964
chr19 13907665 13907995 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 13906274 1391 108389965
chr19 13907670 13907990 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 13906274 1396 108389966
chr19 13907671 13907951 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 13906274 1397 108389967
chr19 13907685 13907911 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 13906274 1411 108389968
chr19 13907688 13907695 SPI1 JASPAR yes 13906274 1414 70810128
chr19 13907689 13908009 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 13906274 1415 108389969
chr19 13907697 13907934 SPI1 UCSC Txn Factor no Conserved 13906274 1423 108389970
chr19 13907697 13907934 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 13906274 1423 108389971
chr19 13907701 13907876 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 13906274 1427 108389972
chr19 13907724 13907730 ZNF354C JASPAR yes 13906274 1450 70810129
chr19 13907729 13907740 NRF1 JASPAR yes 13906274 1455 70810130
chr19 13907730 13907734 LFA1 TRANSFAC yes 13906274 1456 70810131
chr19 13907738 13907749 FOS JASPAR yes 13906274 1464 70810132
chr19 13907738 13907749 JUND JASPAR yes 13906274 1464 70810133
chr19 13907750 13907760 NFATC3 JASPAR yes 13906274 1476 70810134
chr19 13907752 13907759 NFATC2 JASPAR yes 13906274 1478 70810135
chr19 13907752 13907763 NFKB1 JASPAR yes 13906274 1478 70810136
chr19 13907753 13907763 NFKB1 JASPAR yes 13906274 1479 70810137
chr19 13907753 13907763 RELA JASPAR yes 13906274 1479 70810138
chr19 13907753 13907763 REL JASPAR yes 13906274 1479 70810139
chr19 13907753 13907764 NFKB1 JASPAR yes 13906274 1479 70810140
chr19 13907764 13907775 FOSL1 JASPAR yes 13906274 1490 70810141
chr19 13907765 13907776 FOSL2 JASPAR yes 13906274 1491 70810142
chr19 13907765 13907776 JUNB JASPAR yes 13906274 1491 70810143
chr19 13907765 13907779 JUN JASPAR yes 13906274 1491 70810144
chr19 13907766 13907777 BATF JASPAR yes 13906274 1492 70810145
chr19 13907771 13907775 YY1 TRANSFAC yes 13906274 1497 70810146
chr19 13907773 13907783 NFIA JASPAR yes 13906274 1499 70810147
chr19 13907775 13907781 NFIC JASPAR yes 13906274 1501 70810148
chr19 13907781 13907785 NFE TRANSFAC yes 13906274 1507 70810149
chr19 13907781 13907796 TFAP2A JASPAR yes 13906274 1507 70810150
chr19 13907783 13907798 TFAP2A JASPAR yes 13906274 1509 70810151
chr19 13907783 13907798 TFAP2C JASPAR yes 13906274 1509 70810152
chr19 13907784 13907795 TFAP2A JASPAR yes 13906274 1510 70810153
chr19 13907801 13907805 ESR1 TRANSFAC yes 13906274 1527 70810154
chr19 13907816 13907826 ETV6 JASPAR yes 13906274 1542 70810155
chr19 13907818 13907837 RFX2 JASPAR yes 13906274 1544 70810156
chr19 13907828 13908272 ZNF274 GTRD no Bone Marrow (K562) 13906274 1554 108389973
chr19 13907831 13907841 FIGLA JASPAR yes 13906274 1557 70810157
chr19 13907835 13907856 ZNF263 JASPAR yes 13906274 1561 70810158
chr19 13907844 13907858 PLAG1 JASPAR yes 13906274 1570 70810159
chr19 13907852 13908242 ZNF274 GTRD no Cervix (HeLa-S3) 13906274 1578 108389974
SNPs associated with ZSWIM4[ENSG00000132003.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr19 13059147 rs11558955 A G 847127 Esophagus 0.208012 5447549
chr19 14478166 rs1422336 T C 535122 Pancreas 0.228765 5455751
chr19 14097734 rs111287773 C A 154690 Spleen 0.0516498 5452999
chr19 13025087 rs181091434 G C 881187 Lung 0.00653176 5447335
Details of ZSWIM4[ENSG00000132003.5]
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Genomic Location chr19:13906274-13943044[+]
TSS 13906274
Gene Name ZSWIM4
Ensembl ID ENSG00000132003.5
ENTREZID 65249
Uniprot
Q9HA55
Q9H7M6
Protein Name
Zinc finger SWIM domain-containing protein 4
Expression levels of ZSWIM4[ENSG00000132003.5]
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