EnhancerDB
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Enhancers that regulate LRRC8D[ENSG00000171492.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 90183345 90192875 enh26947 90286573 93698
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Muscle (Myoblast) Muscle (Myotube) Blood (T-cell) Heart
chr1 90187003 90187162 vista2392 90286573 99411
VISTA
chr1 90189523 90189798 vista2393 90286573 96775
VISTA
chr1 90190139 90190909 vista2394 90286573 95664
VISTA
chr1 90194653 90194783 vista2395 90286573 91790
VISTA
chr1 90200969 90207655 enh58122 90286573 78918
Esophagus Skin (Keratinocyte) Blood (T-cell)
chr1 90204490 90205244 vista2396 90286573 81329
VISTA
chr1 90207182 90207538 vista2397 90286573 79035
VISTA
chr1 90218145 90222735 enh12025 90286573 63838
Placenta Blood (T-cell)
chr1 90221284 90221408 vista2398 90286573 65165
VISTA
chr1 90223174 90223447 vista2399 90286573 63126
VISTA
chr1 90226145 90226360 vista2400 90286573 60213
VISTA
chr1 90226973 90227143 vista2401 90286573 59430
VISTA
chr1 90244345 90249575 enh47207 90286573 36998
Thymus
chr1 90250265 90254415 enh90701 90286573 32158
Bone Marrow (K562)
chr1 90263165 90267315 enh79133 90286573 19258
Prostate (PC-3)
chr1 90272025 90280755 enh79134 90286573 5818
Prostate (PC-3) Cervix (HeLa-S3) Lung (PC-9) Uterus Epithelial (MCF-7)
chr1 90274070 90274340 vista2402 90286573 12233
VISTA
chr1 90290224 90294598 enh79135 90286573 3651
Prostate (PC-3) Prostate (RWPE1) Lung (PC-9)
chr1 90295055 90306935 enh67045 90286573 8482
Liver (HepG2) Neural Stem Cells (H9) Embryonic Stem Cell Line (H1-hESC) Stomach
chr1 90307405 90311555 enh482 90286573 20832
Blood (Karpas-422)
chr1 90309838 90310280 vista2403 90286573 23265
VISTA
chr1 90317805 90323555 enh26948 90286573 31232
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell)
chr1 90319744 90319959 vista2404 90286573 33171
VISTA
chr1 90321378 90321621 vista2405 90286573 34805
VISTA
chr1 90326658 90341655 enh483 90286573 40085
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Liver Astrocyte Lung (PC-9) Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Thymus Heart
chr1 90342565 90346935 enh74299 90286573 55992
Bone Marrow (K562) Muscle (A673)
chr1 90347765 90388035 enh484 90286573 61192
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 90372321 90372729 vista2406 90286573 85748
VISTA
chr1 90374317 90375036 vista2407 90286573 87744
VISTA
chr1 90376424 90376756 vista2408 90286573 89851
VISTA
Transcript facotrs that regulate LRRC8D[ENSG00000171492.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 90290239 90290244 MYC TRANSFAC yes 90286573 3666 30622658
chr1 90290246 90290252 TCF4 TRANSFAC yes 90286573 3673 30622659
chr1 90290251 90290265 POU1F1 JASPAR yes 90286573 3678 30622660
chr1 90290252 90290264 POU3F1 JASPAR yes 90286573 3679 30622661
chr1 90290267 90290271 H1TF2 TRANSFAC yes 90286573 3694 30622662
chr1 90290267 90290271 NFE TRANSFAC yes 90286573 3694 30622663
chr1 90290267 90290271 SRF TRANSFAC yes 90286573 3694 30622664
chr1 90290284 90290294 HOXA13 JASPAR yes 90286573 3711 30622665
chr1 90290284 90290294 HOXB13 JASPAR yes 90286573 3711 30622666
chr1 90290284 90290294 HOXD13 JASPAR yes 90286573 3711 30622667
chr1 90290285 90290294 CDX1 JASPAR yes 90286573 3712 30622668
chr1 90290290 90290305 RUNX2 JASPAR yes 90286573 3717 30622669
chr1 90290318 90290335 RXRA JASPAR yes 90286573 3745 30622670
chr1 90290350 90290355 MYB TRANSFAC yes 90286573 3777 30622671
chr1 90290351 90290365 POU4F1 JASPAR yes 90286573 3778 30622672
chr1 90290351 90290367 POU4F2 JASPAR yes 90286573 3778 30622673
chr1 90290351 90290367 POU4F3 JASPAR yes 90286573 3778 30622674
chr1 90290354 90290368 POU1F1 JASPAR yes 90286573 3781 30622675
chr1 90290376 90290395 CTCF JASPAR yes 90286573 3803 30622676
chr1 90290396 90290408 TAL1 JASPAR yes 90286573 3823 30622677
chr1 90290396 90290409 ZBTB18 JASPAR yes 90286573 3823 30622678
chr1 90290398 90290408 FIGLA JASPAR yes 90286573 3825 30622679
chr1 90290398 90290408 MSC JASPAR yes 90286573 3825 30622680
chr1 90290398 90290408 MYF6 JASPAR yes 90286573 3825 30622681
chr1 90290398 90290408 TFAP4 JASPAR yes 90286573 3825 30622682
chr1 90290398 90290410 TAL1 JASPAR yes 90286573 3825 30622683
chr1 90290400 90290415 FOXA1 JASPAR yes 90286573 3827 30622684
chr1 90290404 90290415 FOXA1 JASPAR yes 90286573 3831 30622685
chr1 90290404 90290419 MAFK JASPAR yes 90286573 3831 30622686
chr1 90290495 90290505 HOXA13 JASPAR yes 90286573 3922 30622687
chr1 90290495 90290505 HOXD13 JASPAR yes 90286573 3922 30622688
chr1 90290518 90290523 GATA2 JASPAR yes 90286573 3945 30622689
chr1 90290534 90290549 FOXA1 JASPAR yes 90286573 3961 30622690
chr1 90290538 90290542 YY1 TRANSFAC yes 90286573 3965 30622691
chr1 90290538 90290549 FOXA1 JASPAR yes 90286573 3965 30622692
chr1 90290541 90290560 REST JASPAR yes 90286573 3968 30622693
chr1 90290566 90290570 YY1 TRANSFAC yes 90286573 3993 30622694
chr1 90290574 90290578 LFA1 TRANSFAC yes 90286573 4001 30622695
chr1 90290595 90290615 RREB1 JASPAR yes 90286573 4022 30622696
chr1 90290599 90290605 TCF4 TRANSFAC yes 90286573 4026 30622697
chr1 90290613 90290618 ETS2 TRANSFAC yes 90286573 4040 30622698
chr1 90290627 90290632 GATA2 JASPAR yes 90286573 4054 30622699
chr1 90290628 90290643 FOXA1 JASPAR yes 90286573 4055 30622700
chr1 90290629 90290641 FOXI1 JASPAR yes 90286573 4056 30622701
chr1 90290632 90290636 YY1 TRANSFAC yes 90286573 4059 30622702
chr1 90290632 90290643 FOXA1 JASPAR yes 90286573 4059 30622703
chr1 90290633 90290648 MEF2C JASPAR yes 90286573 4060 30622704
chr1 90290636 90290640 YY1 TRANSFAC yes 90286573 4063 30622705
chr1 90290653 90290668 HNF4A JASPAR yes 90286573 4080 30622706
chr1 90290654 90290668 NR2F1 JASPAR yes 90286573 4081 30622707
chr1 90290654 90290668 RXRG JASPAR yes 90286573 4081 30622708
chr1 90290654 90290669 HNF4G JASPAR yes 90286573 4081 30622709
chr1 90290654 90290669 NR2C2 JASPAR yes 90286573 4081 30622710
chr1 90290664 90290668 YY1 TRANSFAC yes 90286573 4091 30622711
chr1 90290681 90290696 MEF2A JASPAR yes 90286573 4108 30622712
chr1 90290683 90290693 ALX3 JASPAR yes 90286573 4110 30622713
chr1 90290683 90290693 MEOX2 JASPAR yes 90286573 4110 30622714
chr1 90290683 90290693 MNX1 JASPAR yes 90286573 4110 30622715
chr1 90290683 90290695 MEF2A JASPAR yes 90286573 4110 30622716
chr1 90290683 90290695 MEF2B JASPAR yes 90286573 4110 30622717
chr1 90290683 90290695 MEF2D JASPAR yes 90286573 4110 30622718
chr1 90290684 90290692 LBX1 JASPAR yes 90286573 4111 30622719
chr1 90290684 90290692 PDX1 JASPAR yes 90286573 4111 30622720
chr1 90290684 90290692 VAX1 JASPAR yes 90286573 4111 30622721
chr1 90290684 90290692 VAX2 JASPAR yes 90286573 4111 30622722
chr1 90290684 90290692 VSX1 JASPAR yes 90286573 4111 30622723
chr1 90290684 90290692 VSX2 JASPAR yes 90286573 4111 30622724
chr1 90290684 90290694 MEF2A JASPAR yes 90286573 4111 30622725
chr1 90290685 90290696 PHOX2A JASPAR yes 90286573 4112 30622726
chr1 90290685 90290696 PROP1 JASPAR yes 90286573 4112 30622727
chr1 90290697 90290704 SPIB JASPAR yes 90286573 4124 30622728
chr1 90290714 90290720 LEF1 TRANSFAC yes 90286573 4141 30622729
chr1 90290714 90290720 SOX10 JASPAR yes 90286573 4141 30622730
chr1 90290739 90290747 FOXL1 JASPAR yes 90286573 4166 30622731
chr1 90290739 90290748 POU5F1B JASPAR yes 90286573 4166 30622732
chr1 90290771 90290775 H4TF2 TRANSFAC yes 90286573 4198 30622733
chr1 90290792 90290804 HNF1B JASPAR yes 90286573 4219 30622734
chr1 90290820 90290830 ALX3 JASPAR yes 90286573 4247 30622735
chr1 90290820 90290830 EMX1 JASPAR yes 90286573 4247 30622736
chr1 90290820 90290830 EMX2 JASPAR yes 90286573 4247 30622737
chr1 90290820 90290830 EN2 JASPAR yes 90286573 4247 30622738
chr1 90290820 90290830 ESX1 JASPAR yes 90286573 4247 30622739
chr1 90290820 90290830 EVX1 JASPAR yes 90286573 4247 30622740
chr1 90290820 90290830 EVX2 JASPAR yes 90286573 4247 30622741
chr1 90290820 90290830 GBX1 JASPAR yes 90286573 4247 30622742
chr1 90290820 90290830 GBX2 JASPAR yes 90286573 4247 30622743
chr1 90290820 90290830 GSX1 JASPAR yes 90286573 4247 30622744
chr1 90290820 90290830 HESX1 JASPAR yes 90286573 4247 30622745
chr1 90290820 90290830 HOXA2 JASPAR yes 90286573 4247 30622746
chr1 90290820 90290830 HOXB2 JASPAR yes 90286573 4247 30622747
chr1 90290820 90290830 HOXB3 JASPAR yes 90286573 4247 30622748
chr1 90290820 90290830 LBX2 JASPAR yes 90286573 4247 30622749
chr1 90290820 90290830 LHX2 JASPAR yes 90286573 4247 30622750
chr1 90290820 90290830 LHX6 JASPAR yes 90286573 4247 30622751
chr1 90290820 90290830 MEOX1 JASPAR yes 90286573 4247 30622752
chr1 90290820 90290830 MEOX2 JASPAR yes 90286573 4247 30622753
chr1 90290820 90290830 MIXL1 JASPAR yes 90286573 4247 30622754
chr1 90290820 90290830 NOTO JASPAR yes 90286573 4247 30622755
chr1 90290820 90290830 POU6F1 JASPAR yes 90286573 4247 30622756
chr1 90290820 90290830 RAX JASPAR yes 90286573 4247 30622757
chr1 90290821 90290829 EN1 JASPAR yes 90286573 4248 30622758
chr1 90290821 90290829 ISX JASPAR yes 90286573 4248 30622759
chr1 90290821 90290829 LBX1 JASPAR yes 90286573 4248 30622760
chr1 90290821 90290829 LHX9 JASPAR yes 90286573 4248 30622761
chr1 90290821 90290829 PAX4 JASPAR yes 90286573 4248 30622762
chr1 90290821 90290829 PDX1 JASPAR yes 90286573 4248 30622763
chr1 90290821 90290829 PRRX1 JASPAR yes 90286573 4248 30622764
chr1 90290821 90290829 RAX2 JASPAR yes 90286573 4248 30622765
chr1 90290821 90290829 SHOX JASPAR yes 90286573 4248 30622766
chr1 90290821 90290829 UNCX JASPAR yes 90286573 4248 30622767
chr1 90290821 90290829 VAX1 JASPAR yes 90286573 4248 30622768
chr1 90290821 90290829 VAX2 JASPAR yes 90286573 4248 30622769
chr1 90290821 90290829 VSX1 JASPAR yes 90286573 4248 30622770
chr1 90290821 90290829 VSX2 JASPAR yes 90286573 4248 30622771
chr1 90290833 90290837 YY1 TRANSFAC yes 90286573 4260 30622772
chr1 90290842 90290857 STAT1 JASPAR yes 90286573 4269 30622773
chr1 90290844 90290855 STAT1 JASPAR yes 90286573 4271 30622774
chr1 90290844 90290855 STAT3 JASPAR yes 90286573 4271 30622775
chr1 90290866 90290876 MAX JASPAR yes 90286573 4293 30622776
chr1 90290866 90290877 USF1 JASPAR yes 90286573 4293 30622777
chr1 90290866 90290877 USF2 JASPAR yes 90286573 4293 30622778
chr1 90290867 90290877 NEUROD2 JASPAR yes 90286573 4294 30622779
chr1 90290876 90290880 YY1 TRANSFAC yes 90286573 4303 30622780
chr1 90290896 90290906 ID4 JASPAR yes 90286573 4323 30622781
chr1 90290896 90290906 TCF3 JASPAR yes 90286573 4323 30622782
chr1 90290896 90290906 TCF4 JASPAR yes 90286573 4323 30622783
chr1 90290898 90290903 USF2 TRANSFAC yes 90286573 4325 30622784
chr1 90290905 90290917 YY1 JASPAR yes 90286573 4332 30622785
chr1 90290910 90290914 YY1 TRANSFAC yes 90286573 4337 30622786
chr1 90290910 90290921 CEBPA JASPAR yes 90286573 4337 30622787
chr1 90290911 90290922 CEBPB JASPAR yes 90286573 4338 30622788
chr1 90290955 90290960 ETS2 TRANSFAC yes 90286573 4382 30622789
chr1 90290957 90290965 EHF JASPAR yes 90286573 4384 30622790
chr1 90290959 90290966 SPIB JASPAR yes 90286573 4386 30622791
chr1 90290970 90290976 LEF1 TRANSFAC yes 90286573 4397 30622792
chr1 90290970 90290976 SOX10 JASPAR yes 90286573 4397 30622793
chr1 90290978 90290990 FOXI1 JASPAR yes 90286573 4405 30622794
chr1 90290978 90290993 FOXP1 JASPAR yes 90286573 4405 30622795
chr1 90290979 90290991 FOXC2 JASPAR yes 90286573 4406 30622796
chr1 90290979 90290993 FOXF2 JASPAR yes 90286573 4406 30622797
chr1 90290988 90290993 GATA1 TRANSFAC yes 90286573 4415 30622798
chr1 90291047 90291058 CEBPA JASPAR yes 90286573 4474 30622799
chr1 90291055 90291063 HOXA5 JASPAR yes 90286573 4482 30622800
chr1 90291066 90291072 GATA3 JASPAR yes 90286573 4493 30622801
chr1 90291071 90291076 GATA2 JASPAR yes 90286573 4498 30622802
chr1 90291074 90291077 MYB TRANSFAC yes 90286573 4501 30622803
chr1 90291081 90291095 ONECUT2 JASPAR yes 90286573 4508 30622804
chr1 90291086 90291098 HNF1B JASPAR yes 90286573 4513 30622805
chr1 90291087 90291107 TP53 JASPAR yes 90286573 4514 30622806
chr1 90291089 90291104 SOX21 JASPAR yes 90286573 4516 30622807
chr1 90291089 90291105 SOX4 JASPAR yes 90286573 4516 30622808
chr1 90291116 90291131 STAT2 JASPAR yes 90286573 4543 30622809
chr1 90291120 90291126 LEF1 TRANSFAC yes 90286573 4547 30622810
chr1 90291120 90291126 SOX10 JASPAR yes 90286573 4547 30622811
chr1 90291120 90291135 FOXP1 JASPAR yes 90286573 4547 30622812
chr1 90291120 90291141 IRF1 JASPAR yes 90286573 4547 30622813
chr1 90291121 90291130 SRY JASPAR yes 90286573 4548 30622814
chr1 90291121 90291132 FOXP2 JASPAR yes 90286573 4548 30622815
chr1 90291121 90291133 FOXC2 JASPAR yes 90286573 4548 30622816
chr1 90291121 90291136 STAT2 JASPAR yes 90286573 4548 30622817
chr1 90291122 90291133 FOXC1 JASPAR yes 90286573 4549 30622818
chr1 90291123 90291134 FOXA1 JASPAR yes 90286573 4550 30622819
chr1 90291131 90291144 POU3F3 JASPAR yes 90286573 4558 30622820
chr1 90291152 90291156 YY1 TRANSFAC yes 90286573 4579 30622821
chr1 90291158 90291166 MEIS2 JASPAR yes 90286573 4585 30622822
chr1 90291158 90291166 MEIS3 JASPAR yes 90286573 4585 30622823
chr1 90291166 90291178 MEF2A JASPAR yes 90286573 4593 30622824
chr1 90291166 90291178 MEF2B JASPAR yes 90286573 4593 30622825
chr1 90291166 90291178 MEF2D JASPAR yes 90286573 4593 30622826
chr1 90291167 90291177 MEF2A JASPAR yes 90286573 4594 30622827
chr1 90291170 90291174 YY1 TRANSFAC yes 90286573 4597 30622828
chr1 90291175 90291196 ZNF263 JASPAR yes 90286573 4602 30622829
chr1 90291222 90291240 IRF2 JASPAR yes 90286573 4649 30622830
chr1 90291231 90291234 MYB TRANSFAC yes 90286573 4658 30622831
chr1 90291242 90291253 NFIL3 JASPAR yes 90286573 4669 30622832
chr1 90291251 90291263 HNF1B JASPAR yes 90286573 4678 30622833
chr1 90291254 90291261 NKX3-1 JASPAR yes 90286573 4681 30622834
chr1 90291259 90291262 MYB TRANSFAC yes 90286573 4686 30622835
chr1 90291284 90291290 SOX10 JASPAR yes 90286573 4711 30622836
chr1 90291291 90291295 YY1 TRANSFAC yes 90286573 4718 30622837
chr1 90291293 90291311 NR3C1 JASPAR yes 90286573 4720 30622838
chr1 90291294 90291302 FEV JASPAR yes 90286573 4721 30622839
chr1 90291295 90291306 NFKB1 JASPAR yes 90286573 4722 30622840
chr1 90291306 90291317 STAT3 JASPAR yes 90286573 4733 30622841
chr1 90291307 90291320 ZBTB18 JASPAR yes 90286573 4734 30622842
chr1 90291355 90291364 NFIX JASPAR yes 90286573 4782 30622843
chr1 90291355 90291365 NFIA JASPAR yes 90286573 4782 30622844
chr1 90291357 90291363 NFIC JASPAR yes 90286573 4784 30622845
chr1 90291383 90291387 NFE TRANSFAC yes 90286573 4810 30622846
chr1 90291384 90291389 GATA2 JASPAR yes 90286573 4811 30622847
chr1 90291385 90291392 POU2F1 TRANSFAC yes 90286573 4812 30622848
chr1 90291390 90291404 RORA JASPAR yes 90286573 4817 30622849
chr1 90291399 90291414 HNF1A JASPAR yes 90286573 4826 30622850
chr1 90291400 90291413 HNF1B JASPAR yes 90286573 4827 30622851
chr1 90291402 90291412 PAX7 JASPAR yes 90286573 4829 30622852
chr1 90291418 90291430 GLI2 JASPAR yes 90286573 4845 30622853
chr1 90291418 90291430 ZBTB7B JASPAR yes 90286573 4845 30622854
chr1 90291418 90291430 ZBTB7C JASPAR yes 90286573 4845 30622855
chr1 90291423 90291435 PKNOX1 JASPAR yes 90286573 4850 30622856
chr1 90291423 90291435 PKNOX2 JASPAR yes 90286573 4850 30622857
chr1 90291429 90291433 NFE TRANSFAC yes 90286573 4856 30622858
chr1 90291444 90291465 ZNF263 JASPAR yes 90286573 4871 30622859
chr1 90291455 90291462 SPIB JASPAR yes 90286573 4882 30622860
chr1 90291485 90291499 JUN JASPAR yes 90286573 4912 30622861
chr1 90291486 90291506 TBX19 JASPAR yes 90286573 4913 30622862
chr1 90291488 90291504 T JASPAR yes 90286573 4915 30622863
chr1 90291496 90291502 SOX10 JASPAR yes 90286573 4923 30622864
chr1 90291511 90291520 SOX9 JASPAR yes 90286573 4938 30622865
chr1 90291521 90291525 H1TF2 TRANSFAC yes 90286573 4948 30622866
chr1 90291521 90291525 NFE TRANSFAC yes 90286573 4948 30622867
chr1 90291521 90291525 SRF TRANSFAC yes 90286573 4948 30622868
chr1 90291527 90291533 LEF1 TRANSFAC yes 90286573 4954 30622869
chr1 90291527 90291533 SOX10 JASPAR yes 90286573 4954 30622870
chr1 90291544 90291548 NFE TRANSFAC yes 90286573 4971 30622871
chr1 90291545 90291558 ZBTB18 JASPAR yes 90286573 4972 30622872
chr1 90291547 90291559 TAL1 JASPAR yes 90286573 4974 30622873
chr1 90291566 90291581 PRDM1 JASPAR yes 90286573 4993 30622874
chr1 90291566 90291581 STAT2 JASPAR yes 90286573 4993 30622875
chr1 90291567 90291581 STAT1 JASPAR yes 90286573 4994 30622876
SNPs associated with LRRC8D[ENSG00000171492.10], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 90512795 rs537800917 CGTTGA C 110625 Esophagus 0.314155 473101
chr1 89517727 rs7515973 C T 768846 Esophagus 0.154338 467673
chr1 90251752 rs10922718 C T 34821 Uterus 0.159314 471069
chr1 90836488 rs79899716 A C 434318 Liver 0.265714 474573
chr1 91276903 rs114331471 C T 874733 Stomach 0.261246 475793
chr1 90309079 rs150448650 G A 0 Adrenal 0.412403 471589
Details of LRRC8D[ENSG00000171492.10]
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Genomic Location chr1:90286573-90402170[+]
TSS 90286573
Gene Name LRRC8D
Ensembl ID ENSG00000171492.10
ENTREZID 55144
Uniprot
Q96GG5
Q7L1W4
B3KRU1
Protein Name
LRRC8D protein
Volume-regulated anion channel subunit LRRC8D
Expression levels of LRRC8D[ENSG00000171492.10]
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