EnhancerDB
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Enhancers that regulate PTRH2[ENSG00000141378.13]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 57698412 57698732 vista25338 57784987 86255
VISTA
chr17 57699645 57721455 enh4504 57784987 63532
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Esophagus Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
chr17 57787983 57788139 vista25339 57784987 2996
VISTA
chr17 57798345 57805319 enh52542 57784987 13358
Liver (HepG2) Large Intestine Esophagus Lung Stomach Lung (PC-9) Breast Uterus Epithelial (MCF-7)
chr17 57820705 57849586 enh4505 57784987 35718
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr17 57829892 57830070 vista25340 57784987 44905
VISTA
chr17 57830594 57831044 vista25341 57784987 45607
VISTA
chr17 57831888 57832338 vista25342 57784987 46901
VISTA
chr17 57833423 57834077 vista25343 57784987 48436
VISTA
chr17 57837481 57837783 vista25344 57784987 52494
VISTA
chr17 57839956 57840355 vista25345 57784987 54969
VISTA
chr17 57841314 57841767 vista25346 57784987 56327
VISTA
chr17 57844650 57844791 vista25347 57784987 59663
VISTA
chr17 57847286 57847866 vista25348 57784987 62299
VISTA
chr17 57852005 57856155 enh96757 57784987 67018
Epithelial (MCF-7)
chr17 57853705 57854627 vista25349 57784987 68718
VISTA
chr17 57857985 57884695 enh4506 57784987 72998
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr17 57860256 57860659 vista25350 57784987 75269
VISTA
chr17 57861698 57862055 vista25351 57784987 76711
VISTA
chr17 57862470 57862813 vista25352 57784987 77483
VISTA
chr17 57863149 57864776 vista706 57784987 78162
VISTA
chr17 57863159 57864676 vista25353 57784987 78172
VISTA
chr17 57866887 57867071 vista25354 57784987 81900
VISTA
chr17 57869540 57869779 vista25355 57784987 84553
VISTA
chr17 57877929 57878135 vista25356 57784987 92942
VISTA
chr17 57881973 57882438 vista25357 57784987 96986
VISTA
chr17 57882537 57882682 vista25358 57784987 97550
VISTA
chr17 57884074 57884248 vista25359 57784987 99087
VISTA
Transcript facotrs that regulate PTRH2[ENSG00000141378.13]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 57787983 57787993 PAX3 JASPAR yes 57784987 2996 21264734
chr17 57787983 57787993 PAX7 JASPAR yes 57784987 2996 21264735
chr17 57787992 57787997 ETS2 TRANSFAC yes 57784987 3005 21264736
chr17 57788050 57788054 NFE TRANSFAC yes 57784987 3063 21264737
chr17 57788052 57788062 TFE3 JASPAR yes 57784987 3065 21264738
chr17 57788052 57788062 TFEB JASPAR yes 57784987 3065 21264739
chr17 57788052 57788062 TFEC JASPAR yes 57784987 3065 21264740
chr17 57788101 57788104 MYB TRANSFAC yes 57784987 3114 21264741
chr17 57788101 57788111 MAX JASPAR yes 57784987 3114 21264742
chr17 57788101 57788113 HES5 JASPAR yes 57784987 3114 21264743
chr17 57788101 57788113 HES7 JASPAR yes 57784987 3114 21264744
chr17 57788102 57788112 CLOCK JASPAR yes 57784987 3115 21264745
chr17 57788102 57788112 HEY1 JASPAR yes 57784987 3115 21264746
chr17 57788102 57788112 HEY2 JASPAR yes 57784987 3115 21264747
chr17 57788102 57788112 MAX JASPAR yes 57784987 3115 21264748
chr17 57788102 57788112 MLXIPL JASPAR yes 57784987 3115 21264749
chr17 57788102 57788112 MNT JASPAR yes 57784987 3115 21264750
chr17 57788102 57788112 MYF6 JASPAR yes 57784987 3115 21264751
chr17 57788102 57788112 SREBF2 JASPAR yes 57784987 3115 21264752
chr17 57788103 57788113 MAX JASPAR yes 57784987 3116 21264753
chr17 57788104 57788109 MYC TRANSFAC yes 57784987 3117 21264754
chr17 57788104 57788109 USF1 TRANSFAC yes 57784987 3117 21264755
chr17 57788104 57788109 USF2 TRANSFAC yes 57784987 3117 21264756
SNPs associated with PTRH2[ENSG00000141378.13], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 57422615 rs114155109 C T 329382 Esophagus 0.0648545 4959053
chr17 57555093 rs57675422 A G,T 196904 Esophagus 0.31837 4960356
chr17 57523679 rs12601496 A G 228318 Heart 0.0668693 4960117
chr17 58168706 rs80274708 T A 383719 Heart 0.208362 4962899
chr17 57543806 rs7221437 A G,T 208191 Pancreas 0.230272 4960293
chr17 58514563 rs138109535 C A,T 729576 Breast 0.434746 4964240
chr17 57543369 rs73327056 G T 208628 Uterus 0.279934 4960287
chr17 57707929 rs73331138 C A 44068 Thyroid 0.123217 4961094
chr17 57070535 rs112852954 T G 681462 Stomach 0.316224 4957759
Details of PTRH2[ENSG00000141378.13]
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Genomic Location chr17:57751997-57784987[-]
TSS 57784987
Gene Name PTRH2
Ensembl ID ENSG00000141378.13
ENTREZID 51651
Uniprot
Q9Y3E5
J3KQ48
Protein Name
mitochondrial
Peptidyl-tRNA hydrolase 2
Expression levels of PTRH2[ENSG00000141378.13]
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